Publications 2022

828 publications

Adopting transfer learning for neuroimaging: a comparative analysis with a custom 3D convolution neural network model.
Soliman A, Chang JR, Etminani K, ..., Alzheimer’s Disease Neuroimaging Initiative , Ochoa-Figueroa M
BMC Med Inform Decis Mak 22 (Suppl 6) 318 [2022-12-07; online 2022-12-07]
AIDA Data Hub [Service]
Isolation and characterization of a main porin from the outer membrane of Salinibacter ruber.
Farci D, Cocco E, Tanas M, ..., Schröder WP, Piano D
J Bioenerg Biomembr 54 (5-6) 273-281 [2022-12-00; online 2022-10-13]
Cryo-EM [Service]
Genomic Profiling Identifies Putative Pathogenic Alterations in NSCLC Brain Metastases.
Nicoś M, Harbers L, Patrucco E, ..., Ambrogio C, Crosetto N
JTO Clin Res Rep 3 (12) 100435 [2022-12-00; online 2022-11-11]
Spatial Proteomics [Service]
Dominantly inherited myosin IIa myopathy caused by aberrant splicing of MYH2.
Hedberg-Oldfors C, Elíasdóttir Ó, Geijer M, Lindberg C, Oldfors A
BMC Neurol 22 (1) 428 [2022-11-15; online 2022-11-15]
Clinical Genomics Gothenburg [Service]
Omicron sublineage BA.2.75.2 exhibits extensive escape from neutralising antibodies.
Sheward DJ, Kim C, Fischbach J, ..., Peacock TP, Murrell B
Lancet Infect Dis 22 (11) 1538-1540 [2022-11-00; online 2022-10-14]
Clinical Genomics Stockholm [Service]
Going Viral: An Investigation into the Chameleonic Behavior or Antiviral Compounds.
Wieske LHE, Atilaw Y, Poongavanam V, Erdélyi M, Kihlberg J
Chemistry - (-) - [2022-10-26; online 2022-10-26]
Swedish NMR Centre (SNC) [Service]
IPT9, a cis-zeatin cytokinin biosynthesis gene, promotes root growth.
Antoniadi I, Mateo-Bonmatí E, Pernisová M, ..., Ljung K, Novák O
Front Plant Sci 13 (-) 932008 [2022-10-14; online 2022-10-14]
Swedish Metabolomics Centre (SMC) [Service]
Modification of xylan via an oxidation-reduction reaction.
Palasingh C, Nakayama K, Abik F, ..., Ström A, Nypelö T
Carbohydr Polym 292 (-) 119660 [2022-09-15; online 2022-05-27]
Swedish NMR Centre (SNC)
Mapping the GALNT1 substrate landscape with versatile proteomics tools
Saei AA, Lundström SL, Lyu H, ..., Gygi SP, Zubarev RA
- - (-) - [2022-08-24; online 2022-08-24]
Chemical Proteomics [Collaborative]
Amplification of CDK4 and MDM2: a detailed study of a high-risk neuroblastoma subgroup.
Martinez-Monleon A, Kryh Öberg H, Gaarder J, ..., Fransson S, Martinsson T
Sci Rep 12 (1) 12420 [2022-07-20; online 2022-07-20]
Clinical Genomics Gothenburg [Service]
Molecular International Prognostic Scoring System for Myelodysplastic Syndromes
Bernard E, Tuechler H, Greenberg PL, ..., Hellström-Lindberg E, Papaemmanuil E
NEJM Evidence 1 (7) - [2022-06-28; online 2022-06-28]
Clinical Genomics Uppsala [Service]
Secondary resistance to idelalisib is characterized by upregulation of IGF1R rather than by MAPK/ERK pathway mutations.
Tausch E, Ljungström V, Agathangelidis A, ..., Rosenquist R, Stilgenbauer S
Blood 139 (22) 3340-3344 [2022-06-02; online 2022-04-05]
Clinical Genomics Uppsala [Service]
Mutation in the TACI gene and autoimmune neutropenia: A case report.
Bergman P, Broliden PA, Ratcliffe P, ..., Höglund P, Palmblad J
Am. J. Hematol. 97 (6) E207-E210 [2022-06-01; online 2022-03-26]
Clinical Genomics Stockholm [Service]
Site-specific N-glycan profiles of α5 β1 integrin from rat liver.
Mirgorodskaya E, Dransart E, Shafaq-Zadah M, ..., Leffler H, Johannes L
Biol Cell 114 (6) 160-176 [2022-06-00; online 2022-03-31]
Glycoproteomics and MS Proteomics [Collaborative]
Auxin boosts energy generation pathways to fuel pollen maturation in barley.
Amanda D, Frey FP, Neumann U, ..., Ljung K, Acosta IF
Curr. Biol. 32 (8) 1798-1811.e8 [2022-04-25; online 2022-03-21]
Swedish Metabolomics Centre (SMC) [Service]
Advances in the development of new biomarkers for Alzheimer's disease.
Klyucherev TO, Olszewski P, Shalimova AA, ..., Syvänen S, Schiöth HB
Transl Neurodegener 11 (1) 25 [2022-04-21; online 2022-04-21]
Affinity Proteomics Uppsala [Service]
The era of reference genomes in conservation genomics.
Formenti G, Theissinger K, Fernandes C, ..., Bálint M, European Reference Genome Atlas (ERGA) Consortium
Trends Ecol Evol 37 (3) 197-202 [2022-03-00; online 2022-01-24]
NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
Metallo-β-Lactamase Inhibitor Phosphonamidate Monoesters.
Palica K, Vorácová M, Skagseth S, ..., Andersson H, Erdélyi M
ACS Omega 7 (5) 4550-4562 [2022-02-08; online 2022-01-25]
Swedish NMR Centre (SNC)
The involvement of cyclotides in mutual interactions of violets and the two-spotted spider mite.
Slazak B, Jędrzejska A, Badyra B, ..., Göransson U, Kiełkiewicz M
Sci Rep 12 (1) 1914 [2022-02-03; online 2022-02-03]
Spatial Mass Spectrometry [Collaborative]