SciLifeLab Infrastructure Units Publications

Publications

The 10 most recent publications

PubMed DOI Crossref

BUTTERFLY: addressing the pooled amplification paradox with unique molecular identifiers in single-cell RNA-seq.

Gustafsson J, Robinson J, Nielsen J, Pachter L

Genome Biol. 22 (1) 174 [2021-06-08; online 2021-06-08]

Systems Biology

PubMed DOI Crossref

The trans-ancestral genomic architecture of glycemic traits.

Chen J, Spracklen CN, Marenne G, ..., Barroso I, Meta-Analysis of Glucose and Insulin-related Traits Consortium (MAGIC)

Nat. Genet. - (-) - [2021-05-31; online 2021-05-31]

NGI Uppsala (SNP&SEQ Technology Platform) National Genomics Infrastructure

PubMed DOI Crossref

A combined approach for single-cell mRNA and intracellular protein expression analysis.

Reimegård J, Tarbier M, Danielsson M, ..., Friedländer MR, Gallant CJ

Commun Biol 4 (1) 624 [2021-05-25; online 2021-05-25]

Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

NK cells integrate signals over large areas when building immune synapses but require local stimuli for degranulation.

Verron Q, Forslund E, Brandt L, ..., Olofsson PE, Önfelt B

Sci Signal 14 (684) eabe2740 [2021-05-25; online 2021-05-25]

Integrated Microscopy Technologies Stockholm [Service]

PubMed DOI Crossref

Diversity in immunogenomics: the value and the challenge.

Peng K, Safonova Y, Shugay M, ..., Karlsson Hedestam GB, Mangul S

Nat. Methods 18 (6) 588-591 [2021-06-00; online 2021-05-19]

Cellular Immunomonitoring [Collaborative]

PubMed DOI Crossref

Pulmonary fibrosis in relation to genetic loci in an inception cohort of patients with early rheumatoid arthritis from northern Sweden.

Jönsson E, Ljung L, Norrman E, ..., Dahlqvist J, Dahlqvist SR

Rheumatology (Oxford) - (-) - [2021-05-16; online 2021-05-16]

Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds.

Buck M, Garcia SL, Fernandez L, ..., Bertilsson S, Peura S

Sci Data 8 (1) 131 [2021-05-14; online 2021-05-14]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Ultralow amounts of DNA from long-term archived serum samples produce high-quality methylomes.

Wojewodzic MW, Leithaug M, Lauritzen M, ..., Grotmol T, Rounge TB

Clin Epigenetics 13 (1) 107 [2021-05-12; online 2021-05-12]

NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) National Genomics Infrastructure

PubMed DOI Crossref

Persisting Salivary IgG against SARS-CoV-2 at 9 Months After Mild COVID-19: A Complementary Approach to Population Surveys.

Alkharaan H, Bayati S, Hellström C, ..., Pin E, Sällberg Chen M

J. Infect. Dis. - (-) - [2021-05-12; online 2021-05-12]

Autoimmunity and Serology Profiling [Collaborative]

PubMed DOI Crossref

Mammuthus sp. (Early and Middle Pleistocene Mammoths).

Pečnerová P, Díez-Del-Molino D, van der Valk T, ..., Götherström A, Dalén L

Trends Genet. 37 (7) 682-683 [2021-07-00; online 2021-05-11]

NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) National Genomics Infrastructure