SciLifeLab Infrastructure Units Publications

Publications by year

The 20 most recent publications

Dynamin2 functions as an accessory protein to reduce the rate of caveola internalization.

Larsson E, Morén B, McMahon KA, Parton RG, Lundmark R

J. Cell Biol. 222 (4) - [2023-04-03; online 2023-02-02]

Integrated Microscopy Technologies Stockholm [Service]

Identification of phenotypically, functionally, and anatomically distinct stromal niche populations in human bone marrow based on single-cell RNA sequencing.

Li H, Bräunig S, Dhapolar P, ..., Lang S, Scheding S

Elife 12 (-) - [2023-03-06; online 2023-03-06]

Clinical Genomics Lund [Service]

PubMed DOI Crossref

NCF1-dependent production of ROS protects against lupus by regulating plasmacytoid dendritic cell development and functions.

Luo H, Urbonaviciute V, Saei AA, ..., Zubarev RA, Holmdahl R

JCI Insight - (-) - [2023-02-28; online 2023-02-28]

Chemical Proteomics [Service]

PubMed DOI Crossref

Insights into the structure-function relationship of the NorQ/NorD chaperones from Paracoccus denitrificans reveal shared principles of interacting MoxR AAA+/VWA domain proteins.

Kahle M, Appelgren S, Elofsson A, Carroni M, Ädelroth P

BMC Biol. 21 (1) 47 [2023-02-28; online 2023-02-28]

Cryo-EM [Service]

PubMed DOI Crossref

Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics.

Jun S, Toosi H, Mold J, ..., Roth A, Lagergren J

Nat Commun 14 (1) 982 [2023-02-22; online 2023-02-22]

NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Accelerated epigenetic aging in women with emotionally unstable personality disorder and a history of suicide attempts.

Boström ADE, Andersson P, Jamshidi E, ..., Åsberg M, Jokinen J

Transl Psychiatry 13 (1) 66 [2023-02-22; online 2023-02-22]

NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Multi-organ single-cell analysis reveals an on/off switch system with potential for personalized treatment of immunological diseases.

Lilja S, Li X, Smelik M, ..., Wang H, Benson M

Cell Reports Medicine - (-) 100956 [2023-02-17; online 2023-02-17]

Affinity Proteomics Stockholm [Service]

PubMed DOI Crossref

Cryo-EM structure and function of S. pombe complex IV with bound respiratory supercomplex factor.

Moe A, Ädelroth P, Brzezinski P, Näsvik Öjemyr L

Commun Chem 6 (1) 32 [2023-02-16; online 2023-02-16]

Cryo-EM [Service]

PubMed DOI Crossref

Array-Based Multiplex and High-Throughput Serology Assays.

Olofsson J, Hellström C, Andersson E, ..., Nilsson P, Pin E

Methods Mol. Biol. 2628 (-) 535-553 [2023-02-14; online 2023-02-14]

Autoimmunity and Serology Profiling [Technology development]

PubMed DOI Crossref

Genomic architecture of migration timing in a long-distance migratory songbird.

de Greef E, Suh A, Thorstensen MJ, Delmore KE, Fraser KC

Sci Rep 13 (1) 2437 [2023-02-10; online 2023-02-10]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Microneedle Patch for Painless Intradermal Collection of Interstitial Fluid Enabling Multi-analyte Measurement of Small Molecules, SARS-CoV-2 Antibodies, and Protein Profiling.

Ribet F, Bendes A, Fredolini C, ..., Stemme G, Roxhed N

Adv Healthc Mater - (-) e2202564 [2023-02-07; online 2023-02-07]

Affinity Proteomics Stockholm [Collaborative]

PubMed DOI Crossref

Proteomic Analysis of Mucosal and Systemic Responses to SARS-CoV-2 Antigen.

Martinson N, Gordhan B, Petkov S, ..., Kana B, Herrera C

Vaccines (Basel) 11 (2) - [2023-02-02; online 2023-02-02]

Affinity Proteomics Stockholm [Service]

PubMed DOI Crossref

Proteogenomics decodes the evolution of human ipsilateral breast cancer.

De Marchi T, Pyl PT, Sjöström M, ..., Malmstöm J, Niméus E

Commun Biol 6 (1) 139 [2023-02-02; online 2023-02-02]

Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

DOI Crossref

Hypercomplex Low Rank Reconstruction for NMR Spectroscopy

Guo Y, Zhan J, Tu Z, ..., Qu X, Guo D

Signal Processing 203 (-) 108809 [2023-02-00; online 2023-02-00]

Swedish NMR Centre (SNC) [Collaborative]

DOI Crossref

Evaluation of kraft and hydrolysis lignin hydroconversion over unsupported NiMoS catalyst

Achour A, Bernin D, Creaser D, Olsson L

Chemical Engineering Journal 453 (-) 139829 [2023-02-00; online 2023-02-00]

Swedish NMR Centre (SNC) [Service]

DOI Crossref

Carbon substrate selects for different lineages of N2O reducing communities in soils under anoxic conditions

Maheshwari A, Jones CM, Tiemann M, Hallin S

Soil Biology and Biochemistry 177 (-) 108909 [2023-02-00; online 2023-02-00]

NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung.

Sountoulidis A, Marco Salas S, Braun E, ..., Nilsson M, Samakovlis C

Nat Cell Biol 25 (2) 351-365 [2023-02-00; online 2023-01-16]

NGI Short read [Service] NGI Single cell [Service] NGI Spatial omics [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Inversions maintain differences between migratory phenotypes of a songbird.

Lundberg M, Mackintosh A, Petri A, Bensch S

Nat Commun 14 (1) 452 [2023-01-27; online 2023-01-27]

NGI Single cell [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

High-density linkage maps and chromosome level genome assemblies unveil direction and frequency of extensive structural rearrangements in wood white butterflies (Leptidea spp.).

Höök L, Näsvall K, Vila R, Wiklund C, Backström N

Chromosome Res. 31 (1) 2 [2023-01-20; online 2023-01-20]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Single-cell analysis of myeloid cells in HPV+ tonsillar cancer.

Jimenez DG, Altunbulakli C, Swoboda S, ..., Greiff L, Lindstedt M

Front Immunol 13 (-) 1087843 [2023-01-19; online 2023-01-19]

Clinical Genomics Lund [Service]