SciLifeLab Infrastructure Units Publications

Publications by year

The 20 most recent publications

Identification of long non-coding RNAs involved in leukemogenesis and venetoclax response in acute myeloid leukemia through functional CRISPR-dCas9 interference screens.

Cozzi E, Neddermeyer A, Miliara S, ..., Lennartsson A, Lehmann S

Noncoding RNA Res 20 (-) 29-43 [2026-10-00; online 2026-06-26]

CRISPR Functional Genomics [Service]

DOI Crossref

Direct visualization of Na,K-ATPase clustering by 3D DNA-PAINT MINFLUX nanoscopy

Stojcic B, Agostinho A, Panconi L, Blom H, Brismar H

- - (-) - [2026-07-03; online 2026-07-03]

Integrated Microscopy Technologies Stockholm [Service]

PubMed DOI Crossref

Ribosome dynamics during skeletal muscle repair and regeneration in mice and humans

Cui M, Edman S, Jude B, ..., Schilcher J, von Walden F

Am. J. Physiol., Cell Physiol. 331 (1) C30-C40 [2026-07-01; online 2026-07-01]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Paleogenomes reveal the evolutionary relationship between modern and cave lions

Stanton DWG, Bergström A, Heintzman PD, ..., Frantz L, Dalén L

Cell 189 (14) 4425-4436.e11 [2026-07-00; online 2026-07-00]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Metformin inhibits small intestinal neuroendocrine tumor growth in vivo

Axling F, Backman S, Hellman P, ..., Barazeghi E, Stålberg P

BMC Cancer 26 (1) - [2026-06-25; online 2026-06-25]

NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

DOI Crossref

Lipid packing contributes to the confinement of caveolae to the plasma membrane

Larsson E, Kabedev A, Pace H, ..., Bally M, Lundmark R

- - (-) - [2026-06-22; online 2026-06-22]

Integrated Microscopy Technologies Umeå [Service]

DOI Crossref

Librarian: An Open-Access Web Application for High-Resolution Mass Spectral Library Assembly

Ahlberg Weidenfors J, Bonnefille B, Papazian S

Metabolites 16 (6) 433 [2026-06-22; online 2026-06-22]

Exposomics [Technology development]

PubMed DOI Crossref

Targeting oncogenic TβRI signaling inhibits androgen-independent prostate cancer growth and metastasis.

Flodbring Larsson P, Schmidt A, Mu Y, ..., Heldin CH, Landström M

Signal Transduct Target Ther 11 (1) - [2026-06-17; online 2026-06-17]

Drug Discovery and Development [Service]

PubMed DOI Crossref

Disrupting Notch signalling by a small molecule inhibiting dihydroorotate dehydrogenase activity.

Braune EB, Wienke D, Seshire A, ..., Lain S, Lendahl U

Sci Rep 16 (1) - [2026-06-06; online 2026-06-06]

Chemical Biology Consortium Sweden [Collaborative]

DOI Crossref

Plattfota säljägare från stenålderns Gotland – tecken på nära släktskap?

Arcini CA, Ahlström T, Lundgren M

FORNVANNEN 121 (2) 141-147 [2026-06-05; online 2026-06-05]

Ancient DNA [Service]

PubMed DOI Crossref

Whole-genome sequencing with AVITI and NovaSeq X Plus reveals comparable performance with contextual biases.

Höjer P, Alneberg J, Lundin P, ..., Nordlund J, Månsson Welinder R

NAR Genom Bioinform 8 (2) lqag053 [2026-06-00; online 2026-05-26]

NGI Short read [Technology development] NGI Stockholm (Genomics Applications) [Technology development] NGI Stockholm (Genomics Production) [Technology development] NGI Uppsala (SNP&SEQ Technology Platform) [Technology development] National Genomics Infrastructure [Technology development]

PubMed DOI Crossref

Spatiotemporal analysis reveals distinct inflammatory programs underlying chronic colitis

Fransson J, Sorini C, Castillo F, ..., Smith P, Villablanca EJ

Immunity 59 (6) 1599-1615.e5 [2026-06-00; online 2026-06-00]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

USP18 Impacts Cisplatin Resistance in Ovarian Cancer Cells by Modulating DNA Repair.

Corno C, Costantino M, Pettinari P, ..., D'Arcy P, Perego P

Int. J. Biol. Sci. 22 (11) 5780-5798 [2026-05-29; online 2026-05-29]

CRISPR Functional Genomics [Service]

PubMed DOI Crossref

ABHD2 activity is not required for the non-genomic action of progesterone on human sperm

Edwards M, Amaral A, Carter EM, ..., Gileadi O, Tredup C

Hum. Reprod. - (-) - [2026-05-29; online 2026-05-29]

Chemical Biology Consortium Sweden [Collaborative]

PubMed DOI Crossref

Probing biofilm development, stress response and heterogeneity—spectroscopic characterization of single and multi-species consortia

Yunda E, Hagberg A, Duteil T, ..., Quilès F, Ramstedt M

NPJ Biofilms Microbiomes 12 (1) - [2026-05-20; online 2026-05-20]

Integrated Microscopy Technologies Umeå [Service]

PubMed DOI Crossref

Comparing DNA metabarcoding with light microscopy to identify eukaryotic phytoplankton in the Baltic Sea, Kattegat and Skagerrak

Torstensson A, Brugel S, Andersson AF, ..., Lycken J, Andersson A

Sci Rep 16 (1) - [2026-05-19; online 2026-05-19]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Systematic discovery of motif-based interactions of the auxiliary domains of USP family deubiquitinases

Konstantinou A, Córdova-Pérez A, Varga JK, ..., Kulathu Y, Ivarsson Y

Nat Commun - (-) - [2026-05-18; online 2026-05-18]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

DOI Crossref

Open and closed forms of assembled henipavirus nucleoprotein suggest structural basis of genome access

Jayachandran RB, Quignon E, Renner M

Sci Adv 12 (20) - [2026-05-15; online 2026-05-15]

Cryo-EM [Service]

DOI Crossref

Decoding murine corneal epithelial specification and homeostasis by single-cell spatial transcriptomics with scRNA-seq enrichment

Javidjam D, Vattulainen M, Lagali N, Moustardas P

- - (-) - [2026-05-12; online 2026-05-12]

Clinical Genomics [Service] Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Mitochondria serve as a holdout compartment for aggregation-prone proteins hindering efficient degradation.

Gierisch ME, Barchi E, Marogna M, ..., Salomons FA, Dantuma NP

Nat Commun 17 (1) - [2026-05-07; online 2026-05-07]

CRISPR Functional Genomics [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]