Publications 2020

Title Authors Journal Published Online
Whole-genome sequencing of recurrent neuroblastoma reveals somatic mutations that affect key players in cancer progression and telomere maintenance. Fransson S, Martinez-Monleon A, Johansson M, ..., Kogner P, Martinsson T Sci Rep 10 (1) 22432 2020-12-31 2020-12-31
Lysophospholipids as Predictive Markers of ST-Elevation Myocardial Infarction (STEMI) and Non-ST-Elevation Myocardial Infarction (NSTEMI). Chorell E, Olsson T, Jansson JH, Wennberg P Metabolites 11 (1) 25 2020-12-31 2020-12-31
Defining eligible patients for allele-selective chemotherapies targeting NAT2 in colorectal cancer. Rendo V, Kundu S, Rameika N, ..., Stoimenov I, Sjöblom T Sci Rep 10 (1) 22436 2020-12-31 2020-12-31
Mechanistic Insights into Regulation of the ALC1 Remodeler by the Nucleosome Acidic Patch. Lehmann LC, Bacic L, Hewitt G, ..., Boulton SJ, Deindl S Cell Rep 33 (12) 108529 2020-12-22 2020-12-29
Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens. Barnett R, Westbury MV, Sandoval-Velasco M, ..., Yamaguchi N, Gilbert MTP Curr. Biol. 30 (24) 5018-5025.e5 2020-12-21 2020-10-15
You Had Me at “MAGIC”!: Four Barley MAGIC Populations Reveal Novel Resistance QTL for Powdery Mildew Novakazi F, Krusell L, Jensen J, ..., Bengtsson T, None Genes 11 (12) 1512 2020-12-18 2020-12-18
Depletion of protein kinase STK25 ameliorates renal lipotoxicity and protects against diabetic kidney disease. Cansby E, Caputo M, Gao L, ..., Howell BW, Mahlapuu M JCI Insight 5 (24) - 2020-12-17 2020-12-17
A biomimetic engineered bone platform for advanced testing of prosthetic implants. Sladkova-Faure M, Pujari-Palmer M, Öhman-Mägi C, ..., Engqvist H, de Peppo GM Sci Rep 10 (1) 22154 2020-12-17 2020-12-17
The Bactericidal Fatty Acid Mimetic 2CCA-1 Selectively Targets Pneumococcal Extracellular Polyunsaturated Fatty Acid Metabolism. Reithuber E, Nannapaneni P, Rzhepishevska O, ..., Henriques-Normark B, Mellroth P MBio 11 (6) e03027-20 2020-12-15 2020-12-15
Structure and elevator mechanism of the mammalian sodium/proton exchanger NHE9. Winklemann I, Matsuoka R, Meier PF, ..., Beckstein O, Drew D EMBO J. 39 (24) e105908 2020-12-15 2020-10-29
Screening of Multiple Biomarkers Associated With Ischemic Stroke in Atrial Fibrillation. Hijazi Z, Wallentin L, Lindbäck J, ..., Oldgren J, Siegbahn A J Am Heart Assoc 9 (24) e018984 2020-12-15 2020-12-09
Rational Design of Azastatin as a Potential ADC Payload with Reduced Bystander Killing. Hartmann RW, Fahrner R, Shevshenko D, ..., Lehmann F, Odell LR ChemMedChem 15 (24) 2500-2512 2020-12-15 2020-10-16
HY5 and phytochrome activity modulate shoot-to-root coordination during thermomorphogenesis in Arabidopsis. Gaillochet C, Burko Y, Platre MP, ..., Chory J, Busch W Development 147 (24) - 2020-12-15 2020-12-15
Direct energy transfer from photosystem II to photosystem I confers winter sustainability in Scots Pine. Bag P, Chukhutsina V, Zhang Z, ..., Holzwarth AR, Jansson S Nat Commun 11 (1) 6388 2020-12-15 2020-12-15
Cryo-EM structure of native human uromodulin, a zona pellucida module polymer. Stsiapanava A, Xu C, Brunati M, ..., Wu B, Jovine L EMBO J. 39 (24) e106807 2020-12-15 2020-11-16
Innate lymphoid cell composition associates with COVID-19 disease severity. García M, Kokkinou E, Carrasco García A, ..., Mjösberg J, Karolinska KI/K COVID‐19 Study Group Clin Transl Immunology 9 (12) e1224 2020-12-14 2020-12-14
Novel Broad-Spectrum Antiviral Inhibitors Targeting Host Factors Essential for Replication of Pathogenic RNA Viruses. Tampere M, Pettke A, Salata C, ..., Jafari R, Puumalainen MR Viruses 12 (12) 1423 2020-12-10 2020-12-10
Hodgkin Lymphoma Monozygotic Triplets Reveal Divergences in DNA Methylation Signatures. Xia C, Olsen TK, Zirakzadeh AA, ..., Björkholm M, Strååt K Front Oncol 10 (-) 598872 2020-12-09 2020-12-09
Capillary leakage provides nutrients and antioxidants for rapid pneumococcal proliferation in influenza-infected lower airways. Sender V, Hentrich K, Pathak A, ..., Normark S, Henriques-Normark B Proc. Natl. Acad. Sci. U.S.A. 117 (49) 31386-31397 2020-12-08 2020-11-23
Reaction Wood Anatomical Traits and Hormonal Profiles in Poplar Bent Stem and Root. De Zio E, Montagnoli A, Karady M, ..., Chiatante D, Trupiano D Front Plant Sci 11 (-) 590985 2020-12-07 2020-12-07
BMP signaling is a therapeutic target in ovarian cancer. Fukuda T, Fukuda R, Tanabe R, ..., Miyazono K, Heldin CH Cell Death Discov 6 (1) 139 2020-12-05 2020-12-05
Resolution enhancement in NMR spectra by deconvolution with compressed sensing reconstruction. Kazimierczuk K, Kasprzak P, Georgoulia PS, ..., Westenhoff S, Orekhov VY Chem. Commun. (Camb.) 56 (93) 14585-14588 2020-12-04 2020-11-04
A Model of Germinal Matrix Hemorrhage in Preterm Rat Pups. Jinnai M, Koning G, Singh-Mallah G, ..., Rocha-Ferreira E, Hagberg H Front Cell Neurosci 14 (-) 535320 2020-12-03 2020-12-03
Moose genomes reveal past glacial demography and the origin of modern lineages. Dussex N, Alberti F, Heino MT, ..., Dalén L, Díez-Del-Molino D BMC Genomics 21 (1) 854 2020-12-02 2020-12-02
Bromopyrylium Derivatization Facilitates Identification by Mass Spectrometry Imaging of Monoamine Neurotransmitters and Small Molecule Neuroactive Compounds. Shariatgorji R, Nilsson A, Strittmatter N, ..., Goodwin RJA, Andrén PE J. Am. Soc. Mass Spectrom. 31 (12) 2553-2557 2020-12-02 2020-07-21
A shotgun metagenomic investigation of the microbiota of udder cleft dermatitis in comparison to healthy skin in dairy cows. Ekman L, Bagge E, Nyman A, ..., Pringle M, Segerman B PLoS ONE 15 (12) e0242880 2020-12-02 2020-12-02
Whole blood co-expression modules associate with metabolic traits and type 2 diabetes: an IMI-DIRECT study. Gudmundsdottir V, Pedersen HK, Mazzoni G, ..., Pedersen O, Brunak S Genome Med 12 (1) 109 2020-12-01 2020-12-01
Amplification-free long-read sequencing reveals unforeseen CRISPR-Cas9 off-target activity. Höijer I, Johansson J, Gudmundsson S, ..., Gyllensten U, Ameur A Genome Biol. 21 (1) 290 2020-12-01 2020-12-01
Tissue-specific patterns of regulatory changes underlying gene expression differences among Ficedula flycatchers and their naturally occurring F1 hybrids. Mugal CF, Wang M, Backström N, ..., Qvarnström A, Ellegren H Genome Res. 30 (12) 1727-1739 2020-12-00 2020-11-03
The methylation landscape and its role in domestication and gene regulation in the chicken. Höglund A, Henriksen R, Fogelholm J, ..., Jensen P, Wright D Nat Ecol Evol 4 (12) 1713-1724 2020-12-00 2020-09-21
Surface analysis of bacterial systems using cryo‐X‐ray photoelectron spectroscopy Hagberg A, Rzhepishevska O, Semenets A, Cisneros DA, Ramstedt M Surf Interface Anal 52 (12) 792-801 2020-12-00 2020-07-02
Solid-state NMR methods for studying membrane systems Gröbner G, Williamson P - - (-) - 2020-12-00 2020-12-00
Mutation-independent Proteomic Signatures of Pathological Progression in Murine Models of Duchenne Muscular Dystrophy. van Westering TLE, Johansson HJ, Hanson B, ..., Aoki Y, Roberts TC Mol. Cell Proteomics 19 (12) 2047-2068 2020-12-00 2020-09-29
Morphological characters and SNP markers suggest hybridization and introgression in sympatric populations of the pleurocarpous mosses Homalothecium lutescens and H. sericeum Sawangproh W, Lang AS, Hedenäs L, Cronberg N Org Divers Evol 20 (4) 619-637 2020-12-00 2020-09-07
Molecular characteristics of eae-positive clinical Shiga toxin-producing Escherichia coli in Sweden. Hua Y, Bai X, Zhang J, ..., Wan C, Matussek A Emerg Microbes Infect 9 (1) 2562-2570 2020-12-00 2020-11-13
Methods for isolation and transcriptional profiling of individual cells from the human heart. Pimpalwar N, Czuba T, Smith ML, ..., Gidlöf O, Smith JG Heliyon 6 (12) e05810 2020-12-00 2020-12-29
Methane potentials and organic matter characterization of wood fibres from pulp and paper mills: The influence of raw material, pulping process and bleaching technique Ekstrand EM, Hedenström M, Svensson BH, Shakeri Yekta S, Björn A Biomass and Bioenergy 143 (-) 105824 2020-12-00 2020-12-00
Metagenome assembled-genomes reveal similar functional profiles of CPR/Patescibacteria phyla in soils. Nascimento Lemos L, Manoharan L, William Mendes L, ..., Satler Pylro V, Tsai SM Environ Microbiol Rep 12 (6) 651-655 2020-12-00 2020-09-07
Heterozygous variants in DCC: Beyond congenital mirror movements. Thams S, Islam M, Lindefeldt M, ..., Nilsson D, Paucar M Neurol Genet 6 (6) e526 2020-12-00 2020-10-20
Glycocholic acid and butyrate synergistically increase vitamin D-induced calcium uptake in Caco-2 intestinal epithelial cell monolayers. Casselbrant A, Fändriks L, Wallenius V Bone Rep 13 (-) 100294 2020-12-00 2020-07-03
Genome-wide association study of angioedema induced by angiotensin-converting enzyme inhibitor and angiotensin receptor blocker treatment. Rasmussen ER, Hallberg P, Baranova EV, ..., Palmer CNA, Wadelius M Pharmacogenomics J. 20 (6) 770-783 2020-12-00 2020-02-21
Genetic Studies of Leptin Concentrations Implicate Leptin in the Regulation of Early Adiposity. Yaghootkar H, Zhang Y, Spracklen CN, ..., Loos RJF, Kilpeläinen TO Diabetes 69 (12) 2806-2818 2020-12-00 2020-09-11
Genetic Predisposition to Coronary Artery Disease in Type 2 Diabetes Mellitus. van Zuydam NR, Ladenvall C, Voight BF, ..., Palmer CNA, SUMMIT Steering Committee; CARDIOGRAMplusC4D Steering Committee* Circ Genom Precis Med 13 (6) e002769 2020-12-00 2020-08-13
Features of increased malignancy in eosinophilic clear cell renal cell carcinoma. Nilsson H, Lindgren D, Axelson H, ..., Lundgren J, Johansson ME J. Pathol. 252 (4) 384-397 2020-12-00 2020-09-24
Exome Sequencing Reveals Common and Rare Variants in F5 Associated With ACE Inhibitor and Angiotensin Receptor Blocker-Induced Angioedema. Maroteau C, Siddiqui MK, Veluchamy A, ..., Palmer CNA, PREDICTION-ADR Clin. Pharmacol. Ther. 108 (6) 1195-1202 2020-12-00 2020-07-18
Effect of RNA silencing suppression activity of chrysanthemum virus B p12 protein on small RNA species. Vetukuri RR, Kalyandurg PB, Saripella GV, ..., Grenville-Briggs LJ, Savenkov EI Arch Virol 165 (12) 2953-2959 2020-12-00 2020-10-10
Dysregulation in Akt/mTOR/HIF-1 signaling identified by proteo-transcriptomics of SARS-CoV-2 infected cells. Appelberg S, Gupta S, Svensson Akusjärvi S, ..., Mirazimi A, Neogi U Emerg Microbes Infect 9 (1) 1748-1760 2020-12-00 2020-07-22
Discovery of rare variants associated with blood pressure regulation through meta-analysis of 1.3 million individuals. Surendran P, Feofanova EV, Lahrouchi N, ..., Munroe PB, Howson JMM Nat. Genet. 52 (12) 1314-1332 2020-12-00 2020-11-23
Differentiation of two Maytenus species and their hybrid via untargeted metabolomics Antunes ERM, Duarte RS, Moritz T, Sawaya ACHF Industrial Crops and Products 158 (-) 113014 2020-12-00 2020-12-00
Deep sequencing detects human papillomavirus (HPV) in cervical cancers negative for HPV by PCR. Arroyo Mühr LS, Lagheden C, Lei J, ..., Sundström K, Dillner J Br. J. Cancer 123 (12) 1790-1795 2020-12-00 2020-10-06
Changes in lipid and carotenoid metabolism in Chlamydomonas reinhardtii during induction of CO2-concentrating mechanism: Cellular response to low CO2 stress Abreu IN, Aksmann A, Bajhaiya AK, ..., Selstam E, Moritz T Algal Research 52 (-) 102099 2020-12-00 2020-12-00
CRISPR and Long-Read Sequencing: A Perfect Match. Ameur A CRISPR J 3 (6) 425-427 2020-12-00 2020-11-30
Associations between serum concentrations of perfluoroalkyl substances and DNA methylation in women exposed through drinking water: A pilot study in Ronneby, Sweden. Xu Y, Jurkovic-Mlakar S, Lindh CH, ..., Jakobsson K, Engström K Environ Int 145 (-) 106148 2020-12-00 2020-09-30
A metabolite roadmap of the wood-forming tissue in Populus tremula. Abreu IN, Johansson AI, Sokołowska K, ..., Street NR, Moritz T New Phytol. 228 (5) 1559-1572 2020-12-00 2020-08-27
A genome-wide association study revealed five SNPs affecting 8-month weight in sheep. Pasandideh M, Gholizadeh M, Rahimi-Mianji G Anim Genet 51 (6) 973-976 2020-12-00 2020-09-10
TrackMate: My favorite image analysis tool, by Neubias members Klemm A Wiley Analytical Science https://analyticalscience.wiley.com/do/10.1002/was.000400044 (-) - 2020-11-30 2020-05-26
Evaluation of Single-Molecule Sequencing Technologies for Structural Variant Detection in Two Swedish Human Genomes. Fatima N, Petri A, Gyllensten U, Feuk L, Ameur A Genes 11 (12) 1444 2020-11-30 2020-11-30
Competitive mapping allows for the identification and exclusion of human DNA contamination in ancient faunal genomic datasets. Feuerborn TR, Palkopoulou E, van der Valk T, ..., Dalén L, Díez-Del-Molino D BMC Genomics 21 (1) 844 2020-11-30 2020-11-30
A workflow for high-throughput screening, data analysis, processing, and hit identification Hansel CS, Yousefian S, Klemm AH, Carreras-Puigvert J KNIME blog https://www.knime.com/blog/a-workflow-for-high-throughput-screening-data-analysis-processing-and-hit-identification (-) - 2020-11-30 2020-06-19
New Insights into the Microbial Profiles of Infected Root Canals in Traumatized Teeth. Manoharan L, Brundin M, Rakhimova O, Chávez de Paz L, Romani Vestman N J Clin Med 9 (12) 3877 2020-11-28 2020-11-28
The Human Adenovirus Type 2 Transcriptome: An Amazing Complexity of Alternatively Spliced mRNAs. Westergren Jakobsson A, Segerman B, Wallerman O, ..., Pettersson U, Akusjärvi G J. Virol. - (-) - 2020-11-25 2020-11-25
Immobilization of sulfate and thiosulfate-reducing biomass on sand under haloalkaline conditions. Sousa JAB, Bolgár A, Christel S, ..., Stams AJM, Plugge CM Sci. Total Environ. 745 (-) 141017 2020-11-25 2020-07-22
Genome-wide identification of Argonautes in Solanaceae with emphasis on potato. Liao Z, Hodén KP, Singh RK, Dixelius C Sci Rep 10 (1) 20577 2020-11-25 2020-11-25
α-Synuclein promotes IAPP fibril formation in vitro and β-cell amyloid formation in vivo in mice. Mucibabic M, Steneberg P, Lidh E, ..., Lindahl E, Edlund H Sci Rep 10 (1) 20438 2020-11-24 2020-11-24
Variations among Viruses in Influent Water and Effluent Water at a Wastewater Plant over One Year as Assessed by Quantitative PCR and Metagenomics. Wang H, Neyvaldt J, Enache L, ..., Bergstedt O, Norder H Appl. Environ. Microbiol. 86 (24) - 2020-11-24 2020-11-24
Structure dynamics of ApoA-I amyloidogenic variants in small HDL increase their ability to mediate cholesterol efflux. Nilsson O, Lindvall M, Obici L, ..., Lagerstedt JO, Del Giudice R J. Lipid Res. 62 (-) 100004 2020-11-24 2020-11-24
High CD45 expression of CD8+ and CD4+ T cells correlates with the size of HIV-1 reservoir in blood. Petkov S, Bekele Y, Lakshmikanth T, ..., Brodin P, Chiodi F Sci Rep 10 (1) 20425 2020-11-24 2020-11-24
Inactivation of mediator complex protein 22 in podocytes results in intracellular vacuole formation, podocyte loss and premature death. Rodriguez PQ, Unnersjö-Jess D, Zambrano SS, ..., Ebarasi L, Patrakka J Sci Rep 10 (1) 20037 2020-11-18 2020-11-18
Exploring autoantibody signatures in brain tissue from patients with severe mental illness. Just D, Månberg A, Mitsios N, ..., Nilsson P, Carlström EL Transl Psychiatry 10 (1) 401 2020-11-18 2020-11-18
A complex DICER1 syndrome phenotype associated with a germline pathogenic variant affecting the RNase IIIa domain of DICER1. Pontén E, Frisk S, Taylan F, ..., Lagerstedt-Robinson K, Nordgren A J. Med. Genet. - (-) jmedgenet-2020-107385 2020-11-18 2020-11-18
Distinct oligodendrocyte populations have spatial preference and different responses to spinal cord injury Floriddia EM, Lourenço T, Zhang S, ..., Nilsson M, Castelo-Branco G Nat Commun 11 (1) 5860 2020-11-17 2020-11-17
Association between Aquatic Micropollutant Dissipation and River Sediment Bacterial Communities. Coll C, Bier R, Li Z, ..., Gorokhova E, Sobek A Environ. Sci. Technol. 54 (22) 14380-14392 2020-11-17 2020-10-26
Evaluation of the efficiency of genomic versus pedigree predictions for growth and wood quality traits in Scots pine. Calleja-Rodriguez A, Pan J, Funda T, ..., Abrahamsson S, Wu HX BMC Genomics 21 (1) 796 2020-11-16 2020-11-16
One-Pot, Metal-Free Synthesis of Dimethyl Carbonate from CO2 at Room Temperature Khokarale SG, Bui TQ, Mikkola JP Sustainable Chemistry 1 (3) 298-314 2020-11-13 2020-11-13
Obesity-associated microbiota contributes to mucus layer defects in genetically obese mice. Schroeder BO, Birchenough GMH, Pradhan M, ..., Hansson GC, Bäckhed F J. Biol. Chem. 295 (46) 15712-15726 2020-11-13 2020-09-08
A ribonucleotide reductase from Clostridium botulinum reveals distinct evolutionary pathways to regulation via the overall activity site. Martínez-Carranza M, Jonna VR, Lundin D, ..., Stenmark P, Hofer A J. Biol. Chem. 295 (46) 15576-15587 2020-11-13 2020-09-03
The Immunology of Multisystem Inflammatory Syndrome in Children with COVID-19. Consiglio CR, Cotugno N, Sardh F, ..., Palma P, Brodin P Cell 183 (4) 968-981.e7 2020-11-12 2020-09-06
Identification of Pre-Diagnostic Metabolic Patterns for Glioma Using Subset Analysis of Matched Repeated Time Points. Jonsson P, Antti H, Späth F, Melin B, Björkblom B Cancers (Basel) 12 (11) 3349 2020-11-12 2020-11-12
Development and evaluation of a deep learning based artificial intelligence for automatic identification of gold fiducial markers in an MRI-only prostate radiotherapy workflow. Gustafsson CJ, Swärd J, Adalbjörnsson SI, Jakobsson A, Olsson LE Phys Med Biol 65 (22) 225011 2020-11-12 2020-11-12
Association of aberrant ASNS imprinting with asparaginase sensitivity and chromosomal abnormality in childhood BCP-ALL. Watanabe A, Miyake K, Nordlund J, ..., Sugita K, Inukai T Blood 136 (20) 2319-2333 2020-11-12 2020-06-24
Recurring urothelial carcinomas show genomic rearrangements incompatible with a direct relationship. Marzouka NA, Lindgren D, Eriksson P, ..., Axelson H, Höglund M Sci Rep 10 (1) 19539 2020-11-11 2020-11-11
Metabolomics of Interstitial Fluid, Plasma and Urine in Patients with Arterial Hypertension: New Insights into the Underlying Mechanisms. Chachaj A, Matkowski R, Gröbner G, Szuba A, Dudka I Diagnostics 10 (11) 936 2020-11-11 2020-11-11
Genome-Scale Mapping Reveals Complex Regulatory Activities of RpoN in Yersinia pseudotuberculosis. Mahmud AKMF, Nilsson K, Fahlgren A, ..., Avican K, Fällman M mSystems 5 (6) - 2020-11-10 2020-11-10
Targeted sequencing reveals the somatic mutation landscape in a Swedish breast cancer cohort. Mathioudaki A, Ljungström V, Melin M, ..., Sjöblom T, Lindblad-Toh K Sci Rep 10 (1) 19304 2020-11-09 2020-11-09
Identification of candidate genetic variants and altered protein expression in neural stem and mature neural cells support altered microtubule function to be an essential component in bipolar disorder. Truvé K, Parris TZ, Vizlin-Hodzic D, ..., Ågren H, Funa K Transl Psychiatry 10 (1) 390 2020-11-09 2020-11-09
Lysine-specific demethylase 1A restricts ex vivo propagation of human HSCs and is a target of UM171. Subramaniam A, Žemaitis K, Talkhoncheh MS, ..., Zubarev RA, Larsson J Blood 136 (19) 2151-2161 2020-11-05 2020-06-26
Draft Genome Assembly of the Freshwater Apex Predator Wels Catfish (Silurus glanis) Using Linked-Read Sequencing. Ozerov MY, Flajšhans M, Noreikiene K, Vasemägi A, Gross R G3 (Bethesda) 10 (11) 3897-3906 2020-11-05 2020-11-05
DNA-Based Methods for Measurable Residual Disease Detection in NPM1-Mutated Acute Myeloid Leukemia; Establishment of Cut-Offs for qPCR, Digital Droplet PCR and Targeted Deep Sequencing Pettersson L, Johansson Alm S, Almstedt A, ..., Fogelstrand L, Ehinger M Blood 136 (Supplement 1) 6-6 2020-11-05 2020-11-05
Point-of-Care Approaches for Meningitis Diagnosis in a Low-Resource Setting (Southwestern Uganda): Observational Cohort Study Protocol of the "PI-POC" Trial. Gaudenzi G, Kumbakumba E, Rasti R, ..., Mwanga-Amumpaire J, Alfvén T JMIR Res Protoc 9 (11) e21430 2020-11-04 2020-11-04
MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells. Sumida N, Sifakis EG, Kiani NA, ..., Göndör A, Ohlsson R Nucleic Acids Res. 48 (19) 10867-10876 2020-11-04 2020-10-15
Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissue. Gyllborg D, Langseth CM, Qian X, ..., Lein ES, Nilsson M Nucleic Acids Res. 48 (19) e112 2020-11-04 2020-09-30
Evolution from adherent to suspension: systems biology of HEK293 cell line development. Malm M, Saghaleyni R, Lundqvist M, ..., Nielsen J, Rockberg J Sci Rep 10 (1) 18996 2020-11-04 2020-11-04
Naming the untouchable - environmental sequences and niche partitioning as taxonomical evidence in fungi. Kalsoom Khan F, Kluting K, Tångrot J, ..., Ryberg M, Rosling A IMA Fungus 11 (1) 23 2020-11-03 2020-11-03
From Inquilines to Gall Inducers: Genomic Signature of a Life-Style Transition in Synergus Gall Wasps. Gobbo E, Lartillot N, Hearn J, ..., Ide T, Ronquist F Genome Biol Evol 12 (11) 2060-2073 2020-11-03 2020-09-29
Cross-validated Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging Quantitation Protocol for a Pharmaceutical Drug and Its Drug-Target Effects in the Brain Using Time-of-Flight and Fourier Transform Ion Cyclotron Resonance Analyzers. Källback P, Vallianatou T, Nilsson A, ..., Svenningsson P, Andrén PE Anal. Chem. 92 (21) 14676-14684 2020-11-03 2020-10-21
Putative Epigenetic Biomarkers of Stress in Red Blood Cells of Chickens Reared Across Different Biomes. Pértille F, Ibelli AMG, Sharif ME, ..., Guerrero-Bosagna C, Coutinho LL Front Genet 11 (-) 508809 2020-11-02 2020-11-02
Pericyte dysfunction due to Shb gene deficiency increases B16F10 melanoma lung metastasis. He Q, Li X, He L, ..., Betsholtz C, Welsh M Int. J. Cancer 147 (9) 2634-2644 2020-11-01 2020-05-30
Interspecific Gene Flow and the Evolution of Specialization in Black and White Rhinoceros. Moodley Y, Westbury MV, Russo IM, ..., Dalén L, Bruford MW Mol. Biol. Evol. 37 (11) 3105-3117 2020-11-01 2020-06-26
Genomic epidemiology of Neisseria gonorrhoeae elucidating the gonococcal antimicrobial resistance and lineages/sublineages across Brazil, 2015-16. Golparian D, Bazzo ML, Golfetto L, ..., Unemo M, Brazilian-GASP Network J. Antimicrob. Chemother. 75 (11) 3163-3172 2020-11-01 2020-08-14
Angiotensin-converting enzyme 2 (ACE2) levels in relation to risk factors for COVID-19 in two large cohorts of patients with atrial fibrillation. Wallentin L, Lindbäck J, Eriksson N, ..., Oldgren J, Siegbahn A Eur. Heart J. 41 (41) 4037-4046 2020-11-01 2020-09-29
The proliferative history shapes the DNA methylome of B-cell tumors and predicts clinical outcome. Duran-Ferrer M, Clot G, Nadeu F, ..., Campo E, Martín-Subero JI Nat Cancer 1 (11) 1066-1081 2020-11-00 2020-11-02
Sahelian pastoralism from the perspective of variants associated with lactase persistence. Priehodová E, Austerlitz F, Čížková M, ..., Schlebusch CM, Černý V Am. J. Phys. Anthropol. 173 (3) 423-436 2020-11-00 2020-08-19
Optimized metabarcoding with Pacific biosciences enables semi-quantitative analysis of fungal communities. Castaño C, Berlin A, Brandström Durling M, ..., Clemmensen KE, Olson Å New Phytol. 228 (3) - 2020-11-00 2020-07-17
Leaf shape in Populus tremula is a complex, omnigenic trait. Mähler N, Schiffthaler B, Robinson KM, ..., Hvidsten TR, Street NR Ecol Evol 10 (21) 11922-11940 2020-11-00 2020-10-13
Identification and rescue of a tRNA wobble inosine deficiency causing intellectual disability disorder. Ramos J, Proven M, Halvardson J, ..., Thuresson AC, Fu D RNA 26 (11) 1654-1666 2020-11-00 2020-08-06
Human G-MDSCs are neutrophils at distinct maturation stages promoting tumor growth in breast cancer Mehmeti-Ajradini M, Bergenfelz C, Larsson AM, ..., Bexell D, Leandersson K Life Sci. Alliance 3 (11) e202000893 2020-11-00 2020-09-21
Epilepsy syndromes, etiologies, and the use of next-generation sequencing in epilepsy presenting in the first 2 years of life: A population-based study. Stödberg T, Tomson T, Barbaro M, ..., Åmark P, Wedell A Epilepsia 61 (11) 2486-2499 2020-11-00 2020-09-23
Divergent above- and below-ground responses of fungal functional groups to forest thinning Collado E, Castaño C, Bonet JA, ..., Martínez de Aragón J, de-Miguel S Soil Biology and Biochemistry 150 (-) 108010 2020-11-00 2020-11-00
Dense sampling of bird diversity increases power of comparative genomics. Feng S, Stiller J, Deng Y, ..., Paten B, Zhang G Nature 587 (7833) 252-257 2020-11-00 2020-11-11
Cytogenetically visible inversions are formed by multiple molecular mechanisms. Pettersson M, Grochowski CM, Wincent J, ..., Carvalho CMB, Lindstrand A Hum. Mutat. 41 (11) 1979-1998 2020-11-00 2020-10-01
A family-based genome-wide association study of recurrent aphthous stomatitis. Bankvall M, Östman S, Jontell M, Torinsson Naluai Å Oral Dis 26 (8) 1696-1705 2020-11-00 2020-07-30
A comparative genomics multitool for scientific discovery and conservation. Zoonomia Consortium Nature 587 (7833) 240-245 2020-11-00 2020-11-11
Origins and genetic legacy of prehistoric dogs. Bergström A, Frantz L, Schmidt R, ..., Larson G, Skoglund P Science 370 (6516) 557-564 2020-10-30 2020-10-29
Intra-Individual Behavioural Variability: A Trait under Genetic Control. Henriksen R, Höglund A, Fogelholm J, ..., Dingemanse NJ, Wright D Int J Mol Sci 21 (21) 8069 2020-10-29 2020-10-29
Impacts of thermal fluctuations on heat tolerance and its metabolomic basis in Arabidopsis thaliana, Drosophila melanogaster, and Orchesella cincta. Noer NK, Pagter M, Bahrndorff S, Malmendal A, Kristensen TN PLoS ONE 15 (10) e0237201 2020-10-29 2020-10-29
Horizontal Gene Transfer and Tandem Duplication Shape the Unique CAZyme Complement of the Mycoparasitic Oomycetes Pythium oligandrum and Pythium periplocum. Liang D, Andersen CB, Vetukuri RR, Dou D, Grenville-Briggs LJ Front Microbiol 11 (-) 581698 2020-10-29 2020-10-29
DNA methylation in canine brains is related to domestication and dog-breed formation. Sundman AS, Pértille F, Lehmann Coutinho L, ..., Guerrero-Bosagna C, Jensen P PLoS ONE 15 (10) e0240787 2020-10-29 2020-10-29
Activation of RAS Signalling is Associated with Altered Cell Adhesion in Phaeochromocytoma. Rossitti HM, Dutta RK, Larsson C, ..., Söderkvist P, Gimm O Int J Mol Sci 21 (21) 8072 2020-10-29 2020-10-29
Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells. Tarbier M, Mackowiak SD, Frade J, ..., Gallant CJ, Friedländer MR Nat Commun 11 (1) 5445 2020-10-28 2020-10-28
Microbiomes in a manganese oxide producing ecosystem in the Ytterby mine, Sweden: impact on metal mobility. Sjöberg S, Stairs CW, Allard B, ..., Ettema TJG, Dupraz C FEMS Microbiol. Ecol. 96 (11) - 2020-10-28 2020-08-21
Population genomics reveals lack of greater white-fronted introgression into the Swedish lesser white-fronted goose. Díez-Del-Molino D, von Seth J, Gyllenstrand N, ..., Sjögren-Gulve P, Dalén L Sci Rep 10 (1) 18347 2020-10-27 2020-10-27
ENPL-1, the Caenorhabditis elegans homolog of GRP94, promotes insulin secretion via regulation of proinsulin processing and maturation. Podraza-Farhanieh A, Natarajan B, Raj D, Kao G, Naredi P Development 147 (20) - 2020-10-27 2020-10-27
Developmental and MAPK-responsive transcription factors drive distinct malignant subtypes and genetic dependencies in pancreatic cancer Laise P, Turunen M, Garcia AC, ..., Olive KP, Califano A - - (-) - 2020-10-27 2020-10-27
Coupling stabilizers open KV1-type potassium channels. Silverå Ejneby M, Wallner B, Elinder F Proc. Natl. Acad. Sci. U.S.A. 117 (43) 27016-27021 2020-10-27 2020-10-13
UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain. Kawale AA, Burmann BM Commun Biol 3 (1) 607 2020-10-23 2020-10-23
Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization. Flygaard RK, Mühleip A, Tobiasson V, Amunts A Nat Commun 11 (1) 5342 2020-10-22 2020-10-22
Polycomb Repressive Complex 2-mediated histone modification H3K27me3 is associated with embryogenic potential in Norway spruce. Nakamura M, Batista RA, Köhler C, Hennig L J. Exp. Bot. 71 (20) 6366-6378 2020-10-22 2020-09-08
Genetic Variants Associated with Non-Alcoholic Fatty Liver Disease Do Not Associate with Measures of Sub-Clinical Atherosclerosis: Results from the IMPROVE Study. Castaldo L, Laguzzi F, Strawbridge RJ, ..., Mälarstig A, Gigante B Genes 11 (11) 1243 2020-10-22 2020-10-22
Epigenetic alterations in skin homing CD4+CLA+ T cells of atopic dermatitis patients. Acevedo N, Benfeitas R, Katayama S, ..., Söderhäll C, Scheynius A Sci Rep 10 (1) 18020 2020-10-22 2020-10-22
Clarithromycin Exerts an Antibiofilm Effect against Salmonella enterica Serovar Typhimurium rdar Biofilm Formation and Transforms the Physiology towards an Apparent Oxygen-Depleted Energy and Carbon Metabolism. Zafar M, Jahan H, Shafeeq S, ..., Römling U, Choudhary MI Infect. Immun. 88 (11) - 2020-10-19 2020-10-19
Automated identification of the mouse brain's spatial compartments from in situ sequencing data. Partel G, Hilscher MM, Milli G, ..., Nilsson M, Wählby C BMC Biol. 18 (1) 144 2020-10-19 2020-10-19
A high-stringency blueprint of the human proteome. Adhikari S, Nice EC, Deutsch EW, ..., Aebersold R, Baker MS Nat Commun 11 (1) 5301 2020-10-16 2020-10-16
Fulvestrant-Mediated Attenuation of the Innate Immune Response Decreases ER+ Breast Cancer Growth In Vivo More Effectively than Tamoxifen. Abrahamsson A, Rodriguez GV, Dabrosin C Cancer Res. 80 (20) 4487-4499 2020-10-15 2020-08-27
Discovery of USP7 small-molecule allosteric inhibitors. Engström O, Belda O, Kullman-Magnusson M, ..., Parkes KEB, Zhao H Bioorg. Med. Chem. Lett. 30 (20) 127471 2020-10-15 2020-08-08
The Structure of Riparian Vegetation in Agricultural Landscapes Influences Spider Communities and Aquatic-Terrestrial Linkages Ramberg E, Burdon FJ, Sargac J, ..., Johnson RK, McKie BG Water 12 (10) 2855 2020-10-14 2020-10-14
Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi. Itoh Y, Naschberger A, Mortezaei N, Herrmann JM, Amunts A Nat Commun 11 (1) 5187 2020-10-14 2020-10-14
Novel pathogenic genomic variants leading to autosomal dominant and recessive Robinow syndrome. Zhang C, Mazzeu JF, Eisfeldt J, ..., Sutton VR, Carvalho CMB Am. J. Med. Genet. A - (-) - 2020-10-13 2020-10-13
The influence of common polygenic risk and gene sets on social skills group training response in autism spectrum disorder. Li D, Choque-Olsson N, Jiao H, ..., Bölte S, Tammimies K npj Genom. Med. 5 (1) 45 2020-10-12 2020-10-12
TIF-Seq2 disentangles overlapping isoforms in complex human transcriptomes. Wang J, Li B, Marques S, ..., Wei W, Pelechano V Nucleic Acids Res. 48 (18) e104 2020-10-09 2020-08-21
Optotracing for selective fluorescence-based detection, visualization and quantification of live S. aureus in real-time. Butina K, Tomac A, Choong FX, ..., Löffler S, Richter-Dahlfors A NPJ Biofilms Microbiomes 6 (1) 35 2020-10-09 2020-10-09
Generation and validation of recombinant antibodies to study human aminoacyl-tRNA synthetases. Preger C, Wigren E, Ossipova E, ..., Gräslund S, Persson H J. Biol. Chem. 295 (41) 13981-13993 2020-10-09 2020-08-14
SARS-CoV-2 exposure, symptoms and seroprevalence in healthcare workers in Sweden. Rudberg AS, Havervall S, Månberg A, ..., Hober S, Thålin C Nat Commun 11 (1) 5064 2020-10-08 2020-10-08
Temporal changes in the vaginal microbiota in self-samples and its association with persistent HPV16 infection and CIN2. Berggrund M, Gustavsson I, Aarnio R, ..., Olovsson M, Gyllensten U Virol J 17 (1) 147 2020-10-07 2020-10-07
GeneSetCluster: a tool for summarizing and integrating gene-set analysis results. Ewing E, Planell-Picola N, Jagodic M, Gomez-Cabrero D BMC Bioinformatics 21 (1) 443 2020-10-07 2020-10-07
Transcriptional responses in developing lesions of European common ash (Fraxinus excelsior) reveal genes responding to infection by Hymenoscyphus fraxineus. Sahraei SE, Cleary M, Stenlid J, Brandström Durling M, Elfstrand M BMC Plant Biol. 20 (1) 455 2020-10-06 2020-10-06
Key insights in the AIDA community policy on sharing of clinical imaging data for research in Sweden. Hedlund J, Eklund A, Lundström C Sci Data 7 (1) 331 2020-10-06 2020-10-06
Pre-extinction Demographic Stability and Genomic Signatures of Adaptation in the Woolly Rhinoceros. Lord E, Dussex N, Kierczak M, ..., Götherström A, Dalén L Curr. Biol. 30 (19) 3871-3879.e7 2020-10-05 2020-08-13
HEARTBREAK Controls Post-translational Modification of INDEHISCENT to Regulate Fruit Morphology in Capsella. Dong Y, Majda M, Šimura J, ..., Smith RS, Østergaard L Curr. Biol. 30 (19) 3880-3888.e5 2020-10-05 2020-08-13
A latent lineage potential in resident neural stem cells enables spinal cord repair. Llorens-Bobadilla E, Chell JM, Le Merre P, ..., Carlén M, Frisén J Science 370 (6512) eabb8795 2020-10-02 2020-10-03
Notch activation in the mouse mammary luminal lineage leads to ductal hyperplasia and altered partitioning of luminal cell subtypes. Phoon YP, Chivukula IV, Tsoi YL, ..., Kuiper R, Lendahl U Exp. Cell Res. 395 (1) 112156 2020-10-01 2020-07-22
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders. Wang T, Hoekzema K, Vecchio D, ..., Xia K, Eichler EE Nat Commun 11 (1) 4932 2020-10-01 2020-10-01
Khoe-San Genomes Reveal Unique Variation and Confirm the Deepest Population Divergence in Homo sapiens. Schlebusch CM, Sjödin P, Breton G, ..., Soodyall H, Jakobsson M Mol. Biol. Evol. 37 (10) 2944-2954 2020-10-01 2020-07-23
Brain Transcriptomics of Wild and Domestic Rabbits Suggests That Changes in Dopamine Signaling and Ciliary Function Contributed to Evolution of Tameness. Sato DX, Rafati N, Ring H, ..., Carneiro M, Andersson L Genome Biol Evol 12 (10) 1918-1928 2020-10-01 2020-08-25
A Repertory of Rearrangements and the Loss of an Inverted Repeat Region in Passiflora Chloroplast Genomes. Cauz-Santos LA, da Costa ZP, Callot C, ..., van den Berg C, Vieira MLC Genome Biol Evol 12 (10) 1841-1857 2020-10-01 2020-07-30
Unraveling the Immune Response in Severe COVID-19. Rodriguez L, Brodin P J Clin Immunol 40 (7) 958-959 2020-10-00 2020-08-22
Profiles of histidine-rich glycoprotein associate with age and risk of all-cause mortality. Hong MG, Dodig-Crnković T, Chen X, ..., Magnusson PK, Schwenk JM Life Sci. Alliance 3 (10) e202000817 2020-10-00 2020-07-31
Ouabain Modulates the Functional Interaction Between Na,K-ATPase and NMDA Receptor. Akkuratov EE, Westin L, Vazquez-Juarez E, ..., Brismar H, Aperia A Mol Neurobiol 57 (10) 4018-4030 2020-10-00 2020-07-10
Multi-Reader-Multi-Split Annotation of Emphysema in Computed Tomography. Lidén M, Hjelmgren O, Vikgren J, Thunberg P J Digit Imaging 33 (5) 1185-1193 2020-10-00 2020-08-10
Mitigation of the replication of SARS-CoV-2 by nitric oxide in vitro. Akaberi D, Krambrich J, Ling J, ..., Lennerstrand J, Lundkvist Å Redox Biol 37 (-) 101734 2020-10-00 2020-09-21
Metagenomic analysis of bacteria in stallion semen. Al-Kass Z, Guo Y, Vinnere Pettersson O, Niazi A, Morrell JM Animal Reproduction Science 221 (-) 106568 2020-10-00 2020-08-01
Implications of TP53 allelic state for genome stability, clinical presentation and outcomes in myelodysplastic syndromes. Bernard E, Nannya Y, Hasserjian RP, ..., Ogawa S, Papaemmanuil E Nat. Med. 26 (10) 1549-1556 2020-10-00 2020-08-03
Geographically widespread invasive meningococcal disease caused by a ciprofloxacin resistant non-groupable strain of the ST-175 clonal complex. Willerton L, Lucidarme J, Campbell H, ..., Vogel U, Borrow R J Infect 81 (4) 575-584 2020-10-00 2020-08-25
Genomic and drug target evaluation of 90 cardiovascular proteins in 30,931 individuals. Folkersen L, Gustafsson S, Wang Q, ..., Ingelsson E, Mälarstig A Nat Metab 2 (10) 1135-1148 2020-10-00 2020-10-16
GPSeq reveals the radial organization of chromatin in the cell nucleus. Girelli G, Custodio J, Kallas T, ..., Crosetto N, Bienko M Nat. Biotechnol. 38 (10) 1184-1193 2020-10-00 2020-05-25
Function of multiple sclerosis-protective HLA class I alleles revealed by genome-wide protein-quantitative trait loci mapping of interferon signalling. Lundtoft C, Pucholt P, Imgenberg-Kreuz J, ..., Rönnblom L, Hagberg N PLoS Genet. 16 (10) e1009199 2020-10-00 2020-10-26
Exploring the bacterial nano-universe. Söderholm N, Singh B, Uhlin BE, Sandblad L Curr. Opin. Struct. Biol. 64 (-) 166-173 2020-10-00 2020-08-23
Differences in structure and hibernation mechanism highlight diversification of the microsporidian ribosome. Ehrenbolger K, Jespersen N, Sharma H, ..., Vossbrinck CR, Barandun J PLoS Biol. 18 (10) e3000958 2020-10-00 2020-10-30
Development of a chemical probe against NUDT15. Zhang SM, Desroses M, Hagenkort A, ..., Stenmark P, Helleday T Nat. Chem. Biol. 16 (10) 1120-1128 2020-10-00 2020-07-20
Association of serum anti-centromere protein F antibodies with clinical response to infliximab in patients with rheumatoid arthritis: A prospective study. Lourido L, Ruiz-Romero C, Picchi F, ..., Nilsson P, Blanco FJ Semin. Arthritis Rheum. 50 (5) 1101-1108 2020-10-00 2020-06-30
High-fat diet and estrogen impacts the colon and its transcriptome in a sex-dependent manner. Hases L, Archer A, Indukuri R, ..., Korach-André M, Williams C Sci Rep 10 (1) 16160 2020-09-30 2020-09-30
Toll-like receptors revisited; a possible role for TLR1 in lupus nephritis. Yavuz S, Bianchi M, Kozyrev S, ..., Lindblad-Toh K, Rönnblom L Ann. Rheum. Dis. 80 (3) 404-406 2020-09-29 2020-09-29
Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3. Rogne P, Dulko-Smith B, Goodman J, ..., Sauer-Eriksson AE, Wolf-Watz M Biochemistry 59 (38) 3570-3581 2020-09-29 2020-09-11
Streamlined and Abundant Bacterioplankton Thrive in Functional Cohorts. Mondav R, Bertilsson S, Buck M, ..., Lindström ES, Garcia SL mSystems 5 (5) - 2020-09-29 2020-09-29
Reconstruction of the birth of a male sex chromosome present in Atlantic herring. Rafati N, Chen J, Herpin A, ..., Schartl M, Andersson L Proc. Natl. Acad. Sci. U.S.A. 117 (39) 24359-24368 2020-09-29 2020-09-16
MAIT cell activation and dynamics associated with COVID-19 disease severity. Parrot T, Gorin JB, Ponzetta A, ..., Strålin K, Sandberg JK Sci Immunol 5 (51) - 2020-09-28 2020-09-30
Inducible Deletion of YAP and TAZ in Adult Mouse Smooth Muscle Causes Rapid and Lethal Colonic Pseudo-Obstruction. Daoud F, Holmberg J, Alajbegovic A, ..., Swärd K, Albinsson S Cellular and Molecular Gastroenterology and Hepatology 11 (2) 623-637 2020-09-28 2020-09-28
Labile Dissolved Organic Matter Compound Characteristics Select for Divergence in Marine Bacterial Activity and Transcription. Pontiller B, Martínez-García S, Lundin D, Pinhassi J Front Microbiol 11 (-) 588778 2020-09-25 2020-09-25
Increased antibiotic efficacy and noninvasive monitoring of Staphylococcus epidermidis biofilms using per-cysteamine-substituted γ-cyclodextrin - A delivery effect validated by fluorescence microscopy. Thomsen H, Agnes M, Uwangue O, ..., Ericson MB, Farewell A Int J Pharm 587 (-) 119646 2020-09-25 2020-07-14
High-Resolution Imaging of Tumor Spheroids and Organoids Enabled by Expansion Microscopy. Edwards SJ, Carannante V, Kuhnigk K, ..., Önfelt B, Brismar H Front Mol Biosci 7 (-) 208 2020-09-24 2020-09-24
Therapeutic targeting of KSP in preclinical models of high-risk neuroblastoma. Hansson K, Radke K, Aaltonen K, ..., Gisselsson D, Bexell D Sci Transl Med 12 (562) - 2020-09-23 2020-09-25
Dental cell type atlas reveals stem and differentiated cell types in mouse and human teeth. Krivanek J, Soldatov RA, Kastriti ME, ..., Kharchenko PV, Adameyko I Nat Commun 11 (1) 4816 2020-09-23 2020-09-23
Sources of variation in cell-type RNA-Seq profiles. Gustafsson J, Held F, Robinson JL, ..., Jörnsten R, Nielsen J PLoS ONE 15 (9) e0239495 2020-09-21 2020-09-21
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples. Bailey MH, Meyerson WU, Dursi LJ, ..., Ding L, PCAWG Consortium Nat Commun 11 (1) 4748 2020-09-21 2020-09-21
Generation of Sequencing Libraries for Structural Analysis of Bacterial 5' UTRs. Ignatov D, Vaitkevicius K, Johansson J STAR Protoc 1 (2) 100046 2020-09-18 2020-06-06
Parvimonas micra as a putative non-invasive faecal biomarker for colorectal cancer. Löwenmark T, Löfgren-Burström A, Zingmark C, ..., Edin S, Palmqvist R Sci Rep 10 (1) 15250 2020-09-17 2020-09-17
Macrocyclization of bis-indole quinolines for selective stabilization of G-quadruplex DNA structures. Das RN, Andréasson M, Kumar R, Chorell E Chem. Sci. 11 (38) 10529-10537 2020-09-16 2020-09-16
Presynaptic dysfunction in CASK-related neurodevelopmental disorders. Becker M, Mastropasqua F, Reising JP, ..., Bölte S, Tammimies K Transl Psychiatry 10 (1) 312 2020-09-14 2020-09-14
Diversity and Abundance of Microbial Communities in UASB Reactors during Methane Production from Hydrolyzed Wheat Straw and Lucerne. Liu T, Schnürer A, Björkmalm J, Willquist K, Kreuger E Microorganisms 8 (9) 1394 2020-09-11 2020-09-11
Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals. Vaga S, Lee S, Ji B, ..., Engstrand L, Shoaie S Sci Rep 10 (1) 14977 2020-09-11 2020-09-11
A whole-genome sequenced control population in northern Sweden reveals subregional genetic differences. Svensson D, Rentoft M, Dahlin AM, ..., Trygg J, Johansson E PLoS ONE 15 (9) e0237721 2020-09-11 2020-09-11
Complete Genome Sequence of Francisella halioticida Type Strain DSM 23729 (FSC1005). Uneklint I, Öhrman C, Karlsson L, ..., Forsman M, Sjödin A Microbiol Resour Announc 9 (37) - 2020-09-10 2020-09-10
Integration of molecular profiles in a longitudinal wellness profiling cohort. Tebani A, Gummesson A, Zhong W, ..., Uhlen M, Fagerberg L Nat Commun 11 (1) 4487 2020-09-08 2020-09-08
Profiling of Inflammatory Proteins in Plasma of HIV-1-Infected Children Receiving Antiretroviral Therapy. Lemma M, Petkov S, Bekele Y, ..., Howe R, Chiodi F Proteomes 8 (3) 24 2020-09-07 2020-09-07
Genome sequence of segmented filamentous bacteria present in the human intestine. Jonsson H, Hugerth LW, Sundh J, Lundin E, Andersson AF Commun Biol 3 (1) 485 2020-09-04 2020-09-04
An alpaca nanobody neutralizes SARS-CoV-2 by blocking receptor interaction. Hanke L, Vidakovics Perez L, Sheward DJ, ..., Murrell B, McInerney GM Nat Commun 11 (1) 4420 2020-09-04 2020-09-04
Bilayer-Coated Nanoparticles Reveal How Influenza Viral Entry Depends on Membrane Deformability but Not Curvature. Villamil Giraldo AM, Kasson PM J Phys Chem Lett 11 (17) 7190-7196 2020-09-03 2020-08-19
Toward Two-Photon Absorbing Dyes with Unusually Potentiated Nonlinear Fluorescence Response. Benitez-Martin C, Li S, Dominguez-Alfaro A, ..., Pischel U, Andréasson J J. Am. Chem. Soc. 142 (35) 14854-14858 2020-09-02 2020-08-21
River biofilms adapted to anthropogenic disturbances are more resistant to WWTP inputs. Freixa A, Perujo N, Langenheder S, Romaní AM FEMS Microbiol. Ecol. 96 (9) - 2020-09-01 2020-08-09
Parallel Evolution of Bower-Building Behavior in Two Groups of Bowerbirds Suggested by Phylogenomics. Ericson PGP, Irestedt M, Nylander JAA, ..., Joseph L, Qu Y Syst. Biol. 69 (5) 820-829 2020-09-01 2020-05-18
Mutations Upstream of the TBX5 and PITX1 Transcription Factor Genes Are Associated with Feathered Legs in the Domestic Chicken. Li J, Lee M, Davis BW, ..., Siegel PB, Andersson L Mol. Biol. Evol. 37 (9) 2477-2486 2020-09-01 2020-04-29
Evolutionary Remodeling of the Cell Envelope in Bacteria of the Planctomycetes Phylum. Mahajan M, Seeger C, Yee B, Andersson SGE Genome Biol Evol 12 (9) 1528-1548 2020-09-01 2020-08-08
Xdrop: Targeted sequencing of long DNA molecules from low input samples using droplet sorting. Madsen EB, Höijer I, Kvist T, Ameur A, Mikkelsen MJ Hum. Mutat. 41 (9) 1671-1679 2020-09-00 2020-06-29
The impact of damage-associated molecular patterns on the neurotransmitter release and gene expression in the ex vivo rat carotid body. Mkrtchian S, Kåhlin J, Gómez-Galán M, ..., Erlandsson Harris H, Eriksson LI Exp. Physiol. 105 (9) 1634-1647 2020-09-00 2020-07-24
Reconstructing marine plankton food web interactions using DNA metabarcoding. Zamora-Terol S, Novotny A, Winder M Mol. Ecol. 29 (17) 3380-3395 2020-09-00 2020-08-09
Linked-read sequencing enables haplotype-resolved resequencing at population scale. Lutgen D, Ritter R, Olsen RA, ..., Suh A, Burri R Mol Ecol Resour 20 (5) 1311-1322 2020-09-00 2020-06-29
Index hopping on the Illumina HiseqX platform and its consequences for ancient DNA studies. van der Valk T, Vezzi F, Ormestad M, Dalén L, Guschanski K Mol Ecol Resour 20 (5) 1171-1181 2020-09-00 2019-05-05
Hyperandrogenism and insulin resistance modulate gravid uterine and placental ferroptosis in PCOS-like rats. Zhang Y, Hu M, Jia W, ..., Shao LR, Billig H J Endocrinol 246 (3) 247-263 2020-09-00 2020-06-27
Hemolytic uremic syndrome caused by Shiga toxin-producing Escherichia coli in children: incidence, risk factors, and clinical outcome. Ylinen E, Salmenlinna S, Halkilahti J, ..., Jalanko H, Saxén H Pediatr Nephrol 35 (9) 1749-1759 2020-09-00 2020-04-22
Genetic comorbidity between major depression and cardio-metabolic traits, stratified by age at onset of major depression. Hagenaars SP, Coleman JRI, Choi SW, ..., Breen G, Lewis CM Am. J. Med. Genet. B Neuropsychiatr. Genet. 183 (6) 309-330 2020-09-00 2020-07-18
Genetic association of gemcitabine/carboplatin-induced leukopenia and neutropenia in non-small cell lung cancer patients using whole-exome sequencing. Svedberg A, Björn N, Sigurgeirsson B, ..., Lundeberg J, Gréen H Lung Cancer 147 (-) 106-114 2020-09-00 2020-07-12
DNA methylation variation in the brain of laying hens in relation to differential behavioral patterns. Guerrero-Bosagna C, Pértille F, Gomez Y, ..., Voelkl B, Toscano MJ Comp Biochem Physiol Part D Genomics Proteomics 35 (-) 100700 2020-09-00 2020-06-02
Comparative analysis of genome-wide DNA methylation in Neurospora. Hosseini S, Meunier C, Nguyen D, Reimegård J, Johannesson H Epigenetics 15 (9) 972-987 2020-09-00 2020-03-31
A dynamic mutational landscape associated with an inter-regionally diverse immune response in malignant rhabdoid tumour. Yasui H, Valind A, Karlsson J, ..., Backman T, Gisselsson D J. Pathol. 252 (1) 22-28 2020-09-00 2020-07-22
A Shh/Gli-driven three-node timer motif controls temporal identity and fate of neural stem cells. Dias JM, Alekseenko Z, Jeggari A, ..., Iber D, Ericson J Sci Adv 6 (38) - 2020-09-00 2020-09-16
Sex differences in oncogenic mutational processes. Li CH, Prokopec SD, Sun RX, ..., Boutros PC, PCAWG Consortium Nat Commun 11 (1) 4330 2020-08-28 2020-08-28
Prenylated Flavonoids from the Roots of Tephrosia rhodesica. Atilaw Y, Muiva-Mutisya L, Bogaerts J, ..., Erdélyi M, Yenesew A J. Nat. Prod. 83 (8) 2390-2398 2020-08-28 2020-08-13
Bulk-Processed Pd Nanocube–Poly(methyl methacrylate) Nanocomposites as Plasmonic Plastics for Hydrogen Sensing Darmadi I, Stolaś A, Östergren I, ..., Müller C, Langhammer C ACS Appl. Nano Mater. 3 (8) 8438-8445 2020-08-28 2020-07-20
High-Throughput Sequencing and Unsupervised Analysis of Formyltetrahydrofolate Synthetase (FTHFS) Gene Amplicons to Estimate Acetogenic Community Structure. Singh A, Nylander JAA, Schnürer A, Bongcam-Rudloff E, Müller B Front Microbiol 11 (-) 2066 2020-08-27 2020-08-27
Four SARS-CoV-2 Genome Sequences from Late April in Stockholm, Sweden, Reveal a Rare Mutation in the Spike Protein. Soratto TAT, Darban H, Bjerkner A, ..., Allander T, Andersson B Microbiol Resour Announc 9 (35) - 2020-08-27 2020-08-27
Cell-surface receptors enable perception of extracellular cytokinins. Antoniadi I, Novák O, Gelová Z, ..., Ljung K, Turnbull C Nat Commun 11 (1) 4284 2020-08-27 2020-08-27
µ Opioid Receptor Agonism for L-DOPA-Induced Dyskinesia in Parkinson's Disease. Bezard E, Li Q, Hulme H, ..., Andren PE, Crossman AR J. Neurosci. 40 (35) 6812-6819 2020-08-26 2020-07-20
Combined transcriptome and proteome profiling of the pancreatic β-cell response to palmitate unveils key pathways of β-cell lipotoxicity. Lytrivi M, Ghaddar K, Lopes M, ..., Eizirik DL, Cnop M BMC Genomics 21 (1) 590 2020-08-26 2020-08-26
Systems-Level Immunomonitoring from Acute to Recovery Phase of Severe COVID-19. Rodriguez L, Pekkarinen PT, Lakshmikanth T, ..., Kekäläinen E, Brodin P Cell Reports Medicine 1 (5) 100078 2020-08-25 2020-08-05
Whole-genome sequencing and gene network modules predict gemcitabine/carboplatin-induced myelosuppression in non-small cell lung cancer patients. Björn N, Badam TVS, Spalinskas R, ..., Gustafsson M, Gréen H npj Syst Biol Appl 6 (1) 25 2020-08-24 2020-08-24
Single cell RNA sequencing identifies early diversity of sensory neurons forming via bi-potential intermediates. Faure L, Wang Y, Kastriti ME, ..., Adameyko I, Hadjab S Nat Commun 11 (1) 4175 2020-08-21 2020-08-21
Natural killer cell immunotypes related to COVID-19 disease severity. Maucourant C, Filipovic I, Ponzetta A, ..., Björkström NK, Karolinska COVID-19 Study Group Sci Immunol 5 (50) eabd6832 2020-08-21 2020-08-23
13q12.2 deletions in acute lymphoblastic leukemia lead to upregulation of FLT3 through enhancer hijacking. Yang M, Safavi S, Woodward EL, ..., Nord KH, Paulsson K Blood 136 (8) 946-956 2020-08-20 2020-05-10
Structural basis of mitochondrial translation Aibara S, Singh V, Modelska A, Amunts A Elife 9 (-) 1-17 2020-08-19 2020-08-19
Rapid size change associated with intra-island evolutionary radiation in extinct Caribbean "island-shrews". Woods R, Turvey ST, Brace S, ..., Brown MJF, Barnes I BMC Evol. Biol. 20 (1) 106 2020-08-18 2020-08-18
High Cysteine Membrane Proteins (HCMPs) Are Up-Regulated During Giardia-Host Cell Interactions. Peirasmaki D, Ma'ayeh SY, Xu F, ..., Liu J, Svärd SG Front Genet 11 (-) 913 2020-08-18 2020-08-18
Designing custom CRISPR libraries for hypothesis-driven drug target discovery. Iyer VS, Jiang L, Shen Y, ..., Schmierer B, Wermeling F Computational and Structural Biotechnology Journal 18 (-) 2237-2246 2020-08-18 2020-08-18
Association of Established Blood Pressure Loci With 10-Year Change in Blood Pressure and Their Ability to Predict Incident Hypertension. Poveda A, Atabaki-Pasdar N, Ahmad S, ..., Renström F, Franks PW J Am Heart Assoc 9 (16) e014513 2020-08-18 2020-08-04
Platelet-Specific PDGFB Ablation Impairs Tumor Vessel Integrity and Promotes Metastasis. Zhang Y, Cedervall J, Hamidi A, ..., Dimberg A, Olsson AK Cancer Res. 80 (16) 3345-3358 2020-08-15 2020-06-25
Crystal structures of human PAICS reveal substrate and product binding of an emerging cancer target. Škerlová J, Unterlass J, Göttmann M, ..., Jemth AS, Stenmark P J. Biol. Chem. 295 (33) 11656-11668 2020-08-14 2020-06-22
Gsta4 controls apoptosis of differentiating adult oligodendrocytes during homeostasis and remyelination via the mitochondria-associated Fas-Casp8-Bid-axis. Carlström KE, Zhu K, Ewing E, ..., Castelo-Branco G, Piehl F Nat Commun 11 (1) 4071 2020-08-13 2020-08-13
Variations in Plasma Membrane Topography Can Explain Heterogenous Diffusion Coefficients Obtained by Fluorescence Correlation Spectroscopy. Gesper A, Wennmalm S, Hagemann P, ..., Happel P, Parmryd I Front Cell Dev Biol 8 (-) 767 2020-08-11 2020-08-11
Transcriptional mutagenesis dramatically alters genome-wide p53 transactivation landscape. Liang S, Ezerskyte M, Wang J, Pelechano V, Dreij K Sci Rep 10 (1) 13513 2020-08-11 2020-08-11
Regular use of depot medroxyprogesterone acetate causes thinning of the superficial lining and apical distribution of HIV target cells in the human ectocervix. Edfeldt G, Lajoie J, Röhl M, ..., Broliden K, Tjernlund A J. Infect. Dis. - (-) - 2020-08-11 2020-08-11
Association of Factor V Leiden With Subsequent Atherothrombotic Events: A GENIUS-CHD Study of Individual Participant Data. Mahmoodi BK, Tragante V, Kleber ME, ..., Asselbergs FW, Patel RS Circulation 142 (6) 546-555 2020-08-11 2020-07-13
Mebendazole is unique among tubulin-active drugs in activating the MEK-ERK pathway. Andersson CR, Selvin T, Blom K, ..., Nygren P, Larsson R Sci Rep 10 (1) 13124 2020-08-04 2020-08-04
Lysophosphatidic Acid-Mediated GPR35 Signaling in CX3CR1+ Macrophages Regulates Intestinal Homeostasis. Kaya B, Doñas C, Wuggenig P, ..., Villablanca EJ, Niess JH Cell Rep 32 (5) 107979 2020-08-04 2020-08-07
Heterogeneous somatostatin-expressing neuron population in mouse ventral tegmental area. Nagaeva E, Zubarev I, Bengtsson Gonzales C, ..., Augustine GJ, Korpi ER Elife 9 (-) - 2020-08-04 2020-08-04
The Relation Between Position and Chemical Composition of Bis-Indole Substituents Determines Their Interactions with G-Quadruplex DNA. Prasad B, Das RN, Jamroskovic J, ..., Sabouri N, Chorell E Chemistry 26 (43) 9561-9572 2020-08-03 2020-07-03
zOPT: an open source optical projection tomography system and methods for rapid 3D zebrafish imaging. Zhang H, Waldmann L, Manuel R, ..., Haitina T, Allalou A Biomed. Opt. Express 11 (8) 4290-4305 2020-08-01 2020-07-15
Optical coherence tomography for thyroid pathology: 3D analysis of tissue microstructure. Emil Tampu I, Maintz M, Koller D, ..., Eklund A, Haj-Hosseini N Biomed. Opt. Express 11 (8) 4130-4149 2020-08-01 2020-07-09
Uncovering the hidden diversity of litter-decomposition mechanisms in mushroom-forming fungi. Floudas D, Bentzer J, Ahrén D, ..., Persson P, Tunlid A ISME J 14 (8) 2046-2059 2020-08-00 2020-05-07
The influence of forest surroundings on the soil fungal community of black truffle (Tuber melanosporum) plantations Oliach D, Colinas C, Castaño C, ..., Bonet JA, Oliva J Forest Ecology and Management 469 (-) 118199 2020-08-00 2020-08-00
The importance of the ZBED6-IGF2 axis for metabolic regulation in mouse myoblast cells. Younis S, Naboulsi R, Wang X, ..., Welsh N, Andersson L FASEB J. 34 (8) 10250-10266 2020-08-00 2020-06-19
The compact genome of Giardia muris reveals important steps in the evolution of intestinal protozoan parasites. Xu F, Jiménez-González A, Einarsson E, ..., Svärd SG, Jerlström-Hultqvist J Microb Genom 6 (8) - 2020-08-00 2020-07-03
The Neolithic Pitted Ware culture foragers were culturally but not genetically influenced by the Battle Axe culture herders. Coutinho A, Günther T, Munters AR, ..., Malmström H, Jakobsson M Am. J. Phys. Anthropol. 172 (4) 638-649 2020-08-00 2020-06-04
Technologies for assessing vaccine responses in the very young. Brodin P Current Opinion in Immunology 65 (-) 28-31 2020-08-00 2020-04-24
SWEDEGENE-a Swedish nation-wide DNA sample collection for pharmacogenomic studies of serious adverse drug reactions. Hallberg P, Yue QY, Eliasson E, ..., Ås J, Wadelius M Pharmacogenomics J. 20 (4) 579-585 2020-08-00 2020-01-17
SLC12A2 mutations cause NKCC1 deficiency with encephalopathy and impaired secretory epithelia. Stödberg T, Magnusson M, Lesko N, ..., Stranneheim H, Wedell A Neurol Genet 6 (4) e478 2020-08-00 2020-07-02
Recent introgression between Taiga Bean Goose and Tundra Bean Goose results in a largely homogeneous landscape of genetic differentiation. Ottenburghs J, Honka J, Müskens GJDM, Ellegren H Heredity (Edinb) 125 (1-2) 73-84 2020-08-00 2020-05-26
Preclinical safety studies of human embryonic stem cell-derived retinal pigment epithelial cells for the treatment of age-related macular degeneration. Petrus-Reurer S, Kumar P, Padrell Sánchez S, ..., Kvanta A, Lanner F Stem Cells Transl Med 9 (8) 936-953 2020-08-00 2020-04-22
Management of an outbreak of postpartum Streptococcus pyogenes emm75 infections. Trell K, Jörgensen J, Rasmussen M, Senneby E J. Hosp. Infect. 105 (4) 752-756 2020-08-00 2020-06-01
Leveraging a gain-of-function allele of Caenorhabditis elegans paqr-1 to elucidate membrane homeostasis by PAQR proteins. Busayavalasa K, Ruiz M, Devkota R, ..., Borén J, Pilon M PLoS Genet. 16 (8) e1008975 2020-08-00 2020-08-04
Label‐free laser scanning microscopy targeting sentinel lymph node diagnostics: A feasibility study ex vivo Kantere D, Siarov J, De Lara S, ..., Wennberg Larkö A, Ericson MB Translational Biophotonics 2 (3) - 2020-08-00 2020-06-22
Joint impact of common risk factors on incident dementia: A cohort study of the Swedish Twin Registry. Tomata Y, Li X, Karlsson IK, ..., Pedersen NL, Hägg S J. Intern. Med. 288 (2) 234-247 2020-08-00 2020-05-03
Higher host plant specialization of root-associated endophytes than mycorrhizal fungi along an arctic elevational gradient. Abrego N, Huotari T, Tack AJM, ..., Ovaskainen O, Roslin T Ecol Evol 10 (16) 8989-9002 2020-08-00 2020-08-06
Evolutionary genetics of canine respiratory coronavirus and recent introduction into Swedish dogs. Wille M, Wensman JJ, Larsson S, ..., Hayer J, Malmberg M Infection, Genetics and Evolution 82 (-) 104290 2020-08-00 2020-03-20
Determinants of genetic variation across eco-evolutionary scales in pinnipeds. Peart CR, Tusso S, Pophaly SD, ..., Shafer ABA, Wolf JBW Nat Ecol Evol 4 (8) 1095-1104 2020-08-00 2020-06-08
CELLULOSE SYNTHASE INTERACTING 1 is required for wood mechanics and leaf morphology in aspen. Bünder A, Sundman O, Mahboubi A, ..., Rüggeberg M, Niittylä T Plant J. 103 (5) 1858-1868 2020-08-00 2020-07-10
Association between proteomics and obstructive sleep apnea phenotypes in a community-based cohort of women. Ljunggren M, Theorell-Haglöw J, Freyhult E, ..., Janson C, Lindberg E J Sleep Res 29 (4) e13041 2020-08-00 2020-04-08
Archaea in boreal Swedish lakes are diverse, dominated by Woesearchaeota and follow deterministic community assembly. Juottonen H, Fontaine L, Wurzbacher C, ..., Peura S, Eiler A Environ. Microbiol. 22 (8) 3158-3171 2020-08-00 2020-06-03
Apparent stiffness of vimentin intermediate filaments in living cells and its relation with other cytoskeletal polymers Smoler M, Coceano G, Testa I, Bruno L, Levi V Biochimica et Biophysica Acta (BBA) - Molecular Cell Research 1867 (8) 118726 2020-08-00 2020-08-00
A novel recombinant expression and purification approach for the full-length anti-apoptotic membrane protein Bcl-2. Ådén J, Mushtaq AU, Dingeldein A, Wallgren M, Gröbner G Protein Expression and Purification 172 (-) 105628 2020-08-00 2020-03-22
A decade of epigenetic change in aging twins: Genetic and environmental contributions to longitudinal DNA methylation. Reynolds CA, Tan Q, Munoz E, ..., Hägg S, Pedersen NL Aging Cell 19 (8) e13197 2020-08-00 2020-07-24
A 3D Cell Culture Model Identifies Wnt/β-Catenin Mediated Inhibition of p53 as a Critical Step during Human Hepatocyte Regeneration. Oliva-Vilarnau N, Vorrink SU, Ingelman-Sundberg M, Lauschke VM Adv Sci (Weinh) 7 (15) 2000248 2020-08-00 2020-06-23
The genetic regulation of size variation in the transcriptome of the cerebrum in the chicken and its role in domestication and brain size evolution. Höglund A, Strempfl K, Fogelholm J, Wright D, Henriksen R BMC Genomics 21 (1) 518 2020-07-29 2020-07-29
First evidence of microbial wood degradation in the coastal waters of the Antarctic. Björdal CG, Dayton PK Sci Rep 10 (1) 12774 2020-07-29 2020-07-29
Extracellular vesicles from human mesenchymal stem cells expedite chondrogenesis in 3D human degenerative disc cell cultures. Hingert D, Ekström K, Aldridge J, Crescitelli R, Brisby H Stem Cell Res Ther 11 (1) 323 2020-07-29 2020-07-29
Detection of leukemia gene fusions by targeted RNA-sequencing in routine diagnostics. Engvall M, Cahill N, Jonsson BI, ..., Hallböök H, Cavelier L BMC Med Genomics 13 (1) 106 2020-07-29 2020-07-29
Combining transcriptomics and genetic linkage based information to identify candidate genes associated with Heterobasidion-resistance in Norway spruce. Chaudhary R, Lundén K, Dalman K, ..., Stenlid J, Elfstrand M Sci Rep 10 (1) 12711 2020-07-29 2020-07-29
Prototypical pacemaker neurons interact with the resident microbiota. Klimovich A, Giacomello S, Björklund Å, ..., Adameyko I, Bosch TCG Proc. Natl. Acad. Sci. U.S.A. 117 (30) 17854-17863 2020-07-28 2020-07-09
Early Pleistocene origin and extensive intra-species diversity of the extinct cave lion. Stanton DWG, Alberti F, Plotnikov V, ..., Skoglund P, Dalén L Sci Rep 10 (1) 12621 2020-07-28 2020-07-28
A Transmembrane Crenarchaeal Mannosyltransferase Is Involved in N-Glycan Biosynthesis and Displays an Unexpected Minimal Cellulose-Synthase-like Fold. Gandini R, Reichenbach T, Spadiut O, ..., Kalyani DC, Divne C J. Mol. Biol. 432 (16) 4658-4672 2020-07-24 2020-06-19
Recording In-Cell NMR-Spectra in Living Mammalian Cells. Matečko-Burmann I, Burmann BM Methods Mol. Biol. 2141 (-) 857-871 2020-07-23 2020-07-23
Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma. Ji AL, Rubin AJ, Thrane K, ..., Lundeberg J, Khavari PA Cell 182 (2) 497-514.e22 2020-07-23 2020-06-23
Decellularization and recellularization of the ovary for bioengineering applications; studies in the mouse. Alshaikh AB, Padma AM, Dehlin M, ..., Brännström M, Hellström M Reprod Biol Endocrinol 18 (1) 75 2020-07-23 2020-07-23
Cell-Free Protein Synthesis of Small Intrinsically Disordered Proteins for NMR Spectroscopy. Isaksson L, Pedersen A Methods Mol. Biol. 2141 (-) 233-245 2020-07-23 2020-07-23
Extended-Spectrum-β-Lactamase- and Plasmid AmpC-Producing Escherichia coli Causing Community-Onset Bloodstream Infection: Association of Bacterial Clones and Virulence Genes with Septic Shock, Source of Infection, and Recurrence. Fröding I, Hasan B, Sylvin I, ..., Nauclér P, Giske CG Antimicrob. Agents Chemother. 64 (8) - 2020-07-22 2020-07-22
Human Immune System Variation during 1 Year. Lakshmikanth T, Muhammad SA, Olin A, ..., Uhlen M, Brodin P Cell Rep 32 (3) 107923 2020-07-21 2020-07-23
Descriptive Proteome Analysis to Investigate Context-Dependent Treatment Responses to OXPHOS Inhibition in Colon Carcinoma Cells Grown as Monolayer and Multicellular Tumor Spheroids. Steinmetz J, Senkowski W, Lengqvist J, ..., Fryknäs M, Kultima K ACS Omega 5 (28) 17242-17254 2020-07-21 2020-07-06
Probing the retention mechanism of small hydrophilic molecules in hydrophilic interaction chromatography using saturation transfer difference nuclear magnetic resonance spectroscopy. Shamshir A, Dinh NP, Jonsson T, Sparrman T, Irgum K Journal of Chromatography A 1623 (-) 461130 2020-07-19 2020-04-29
Validating Signal Transducer and Activator of Transcription (STAT) Protein-Inhibitor Interactions Using Biochemical and Cellular Thermal Shift Assays. Attarha S, Reithmeier A, Busker S, Desroses M, Page BDG ACS Chem. Biol. 15 (7) 1842-1851 2020-07-17 2020-07-02
Unveiling the activation dynamics of a fold-switch bacterial glycosyltransferase by 19F NMR. Liebau J, Tersa M, Trastoy B, ..., Guerin ME, Mäler L J. Biol. Chem. 295 (29) 9868-9878 2020-07-17 2020-05-20
Translating GWAS-identified loci for cardiac rhythm and rate using an in vivo image- and CRISPR/Cas9-based approach von der Heyde B, Emmanouilidou A, Mazzaferro E, ..., Brooke HL, den Hoed M Sci Rep 10 (1) 11831 2020-07-16 2020-07-16
AML displays increased CTCF occupancy associated with aberrant gene expression and transcription factor binding. Mujahed H, Miliara S, Neddermeyer A, ..., Lennartsson A, Lehmann S Blood 136 (3) 339-352 2020-07-16 2020-04-02
RNA Splicing Alterations Induce a Cellular Stress Response Associated with Poor Prognosis in Acute Myeloid Leukemia. Anande G, Deshpande NP, Mareschal S, ..., Unnikrishnan A, Pimanda JE Clin. Cancer Res. 26 (14) 3597-3607 2020-07-15 2020-03-02
Adding seemingly uninformative labels helps in low data regimes Matsoukas C, Hernandez A, Liu Y, ..., Strand F, Smith K International Conference on Machine Learning (ICML) - (-) - 2020-07-15 -
Seamless integration of image and molecular analysis for spatial transcriptomics workflows. Bergenstråhle J, Larsson L, Lundeberg J BMC Genomics 21 (1) 482 2020-07-14 2020-07-14
A Patient-Derived Cell Atlas Informs Precision Targeting of Glioblastoma. Johansson P, Krona C, Kundu S, ..., Marino S, Nelander S Cell Rep 32 (2) 107897 2020-07-14 2020-07-16
Mapping the Interactome of the Nuclear Heparan Sulfate Proteoglycan Syndecan-1 in Mesothelioma Cells. Kumar-Singh A, Shrinet J, Parniewska MM, ..., Dobra K, Hjerpe A Biomolecules 10 (7) - 2020-07-11 2020-07-11
Transcriptional responses in Parascaris univalens after in vitro exposure to ivermectin, pyrantel citrate and thiabendazole. Martin F, Dube F, Karlsson Lindsjö O, ..., Bergström TF, Tydén E Parasit Vectors 13 (1) 342 2020-07-09 2020-07-09
SF3B1-mutant MDS as a distinct disease subtype: a proposal from the International Working Group for the Prognosis of MDS. Malcovati L, Stevenson K, Papaemmanuil E, ..., Hellstrom-Lindberg E, Cazzola M Blood 136 (2) 157-170 2020-07-09 2020-04-30
Disturbance history can increase functional stability in the face of both repeated disturbances of the same type and novel disturbances. Renes SE, Sjöstedt J, Fetzer I, Langenheder S Sci Rep 10 (1) 11333 2020-07-09 2020-07-09
Systems biology of acidophile biofilms for efficient metal extraction. Buetti-Dinh A, Herold M, Christel S, ..., Pivkin IV, Dopson M Sci Data 7 (1) 215 2020-07-07 2020-07-07
Low Abundance of Methanotrophs in Sediments of Shallow Boreal Coastal Zones With High Water Methane Concentrations. Broman E, Sun X, Stranne C, ..., Humborg C, Nascimento FJA Front Microbiol 11 (-) 1536 2020-07-07 2020-07-07
Discovery and population genomics of structural variation in a songbird genus. Weissensteiner MH, Bunikis I, Catalán A, ..., Warmuth VM, Wolf JBW Nat Commun 11 (1) 3403 2020-07-07 2020-07-07
Clonal hematopoiesis in patients with high-grade B-cell lymphoma is associated with inferior outcome. Amini RM, Ljungström V, Abdulla M, ..., Enblad G, Baliakas P Am. J. Hematol. 95 (10) - 2020-07-06 2020-07-06
VEGF-B signaling impairs endothelial glucose transcytosis by decreasing membrane cholesterol content. Moessinger C, Nilsson I, Muhl L, ..., Skogsberg J, Eriksson U EMBO Rep. 21 (7) e49343 2020-07-03 2020-05-24
Spatio-molecular domains identified in the mouse subthalamic nucleus and neighboring glutamatergic and GABAergic brain structures. Wallén-Mackenzie Å, Dumas S, Papathanou M, ..., König N, Björklund ÅK Commun Biol 3 (1) 338 2020-07-03 2020-07-03
Multiplex profiling of serum proteins in solution using barcoded antibody fragments and next generation sequencing. Brofelth M, Ekstrand AI, Gour S, ..., Axelsson U, Borrebaeck CAK Commun Biol 3 (1) 339 2020-07-03 2020-07-03
Diamond Blackfan anemia is mediated by hyperactive Nemo-like kinase. Wilkes MC, Siva K, Chen J, ..., Flygare J, Sakamoto KM Nat Commun 11 (1) 3344 2020-07-03 2020-07-03
meQTL and ncRNA functional analyses of 102 GWAS-SNPs associated with depression implicate HACE1 and SHANK2 genes. Ciuculete DM, Voisin S, Kular L, ..., Mwinyi J, Schiöth HB Clin Epigenetics 12 (1) 99 2020-07-02 2020-07-02
Y-Chromosome Variation in Southern African Khoe-San Populations Based on Whole-Genome Sequences. Naidoo T, Xu J, Vicente M, ..., Jakobsson M, Schlebusch CM Genome Biol Evol 12 (7) 1031-1039 2020-07-01 2020-07-23
Viral antigens elicit augmented immune responses in primary Sjögren's syndrome. Björk A, Thorlacius GE, Mofors J, ..., Kvarnström M, Wahren-Herlenius M Rheumatology (Oxford) 59 (7) 1651-1661 2020-07-01 2019-10-31
Loqusdb: added value of an observations database of local genomic variation. Magnusson M, Eisfeldt J, Nilsson D, ..., Wedell A, Stranneheim H BMC Bioinformatics 21 (1) 273 2020-07-01 2020-07-01
Genetic Associations Between Childhood Psychopathology and Adult Depression and Associated Traits in 42 998 Individuals: A Meta-analysis. Akingbuwa WA, Hammerschlag AR, Jami ES, ..., Middeldorp CM, Bipolar Disorder and Major Depressive Disorder Working Groups of the Psychiatric Genomics Consortium JAMA Psychiatry 77 (7) 715-728 2020-07-01 2020-04-16
Transcriptomes from German shepherd dogs reveal differences in immune activity between atopic dermatitis affected and control skin. Tengvall K, Bergvall K, Olsson M, ..., Lindblad-Toh K, Andersson G Immunogenetics 72 (5) 315-323 2020-07-00 2020-06-18
Tissue-specific isolation of Arabidopsis/plant mitochondria - IMTACT (isolation of mitochondria tagged in specific cell types). Boussardon C, Przybyla-Toscano J, Carrie C, Keech O Plant J. 103 (1) 459-473 2020-07-00 2020-03-13
Support systems to guide clinical decision-making in precision oncology: The Cancer Core Europe Molecular Tumor Board Portal. Tamborero D, Dienstmann R, Rachid MH, ..., Rodon J, Lehtiö J Nat. Med. 26 (7) 992-994 2020-07-00 2020-07-08
Serum Metabolites in Hand-Arm Vibration Exposed Workers. Vihlborg P, Graff P, Hagenbjörk A, ..., Bryngelsson IL, Eriksson K J Occup Environ Med 62 (7) 460-465 2020-07-00 2020-07-31
Proteomic analysis of follicular fluid during human ovulation. Zakerkish F, Brännström M, Carlsohn E, ..., van der Post S, Thoroddsen A Acta Obstet Gynecol Scand 99 (7) 917-924 2020-07-00 2020-04-07
Pre- and postnatal Lactobacillus reuteri treatment alters DNA methylation of infant T helper cells. Forsberg A, Huoman J, Söderholm S, ..., Gustafsson M, Jenmalm MC Pediatr Allergy Immunol 31 (5) 544-553 2020-07-00 2020-04-03
PHF1 fusions cause distinct gene expression and chromatin accessibility profiles in ossifying fibromyxoid tumors and mesenchymal cells. Hofvander J, Jo VY, Fletcher CDM, ..., Magnusson L, Mertens F Mod. Pathol. 33 (7) 1331-1340 2020-07-00 2020-01-13
Odorant receptor phylogeny confirms conserved channels for sex pheromone and host plant signals in tortricid moths. Gonzalez F, Borrero-Echeverry F, Jósvai JK, ..., Bengtsson M, Walker WB Ecol Evol 10 (14) 7334-7348 2020-07-00 2020-06-30
Meiofauna improve oxygenation and accelerate sulfide removal in the seasonally hypoxic seabed. Bonaglia S, Hedberg J, Marzocchi U, ..., Glud RN, Nascimento FJA Mar Environ Res 159 (-) 104968 2020-07-00 2020-03-29
Inflammatory markers in women with postpartum depressive symptoms. Bränn E, Fransson E, White RA, ..., Sundström-Poromaa I, Skalkidou A J Neuro Res 98 (7) 1309-1321 2020-07-00 2018-09-05
Identifying the ‘unidentified’ fungi: a global-scale long-read third-generation sequencing approach Tedersoo L, Anslan S, Bahram M, Kõljalg U, Abarenkov K Fungal Diversity 103 (1) 273-293 2020-07-00 2020-08-08
Growth-Inhibitory Activity of Bone Morphogenetic Protein 4 in Human Glioblastoma Cell Lines Is Heterogeneous and Dependent on Reduced SOX2 Expression. Dalmo E, Johansson P, Niklasson M, ..., Nelander S, Westermark B Mol Cancer Res 18 (7) 981-991 2020-07-00 2020-03-31
Genomic epidemiology and antimicrobial resistance determinants of Neisseria gonorrhoeae isolates from Ukraine, 2013-2018. Boiko I, Golparian D, Jacobsson S, ..., Shevchenko T, Unemo M APMIS 128 (7) 465-475 2020-07-00 2020-05-23
Gastric Microbiota in a Low-Helicobacter pylori Prevalence General Population and Their Associations With Gastric Lesions. Ndegwa N, Ploner A, Andersson AF, ..., Agreus L, Ye W Clin Transl Gastroenterol 11 (7) e00191 2020-07-00 2020-08-09
Female-biased gene flow between two species of Darwin's finches. Lamichhaney S, Han F, Webster MT, ..., Grant PR, Andersson L Nat Ecol Evol 4 (7) 979-986 2020-07-00 2020-05-04
Facets of individual-specific health signatures determined from longitudinal plasma proteome profiling. Dodig-Crnković T, Hong MG, Thomas CE, ..., Uhlén M, Schwenk JM EBioMedicine 57 (-) 102854 2020-07-00 2020-07-03
Dynamic allosteric communication pathway directing differential activation of the glucocorticoid receptor. Köhler C, Carlström G, Gunnarsson A, ..., Edman K, Akke M Sci Adv 6 (29) eabb5277 2020-07-00 2020-07-17
Deactivation mechanism of Cu active sites in Cu/SSZ-13 — Phosphorus poisoning and the effect of hydrothermal aging Wang A, Xie K, Bernin D, ..., Kamasamudram K, Olsson L Applied Catalysis B: Environmental 269 (-) 118781 2020-07-00 2020-07-00
DNA demethylation regulates gene expression in IgE-activated mouse mast cells. Paivandy A, Grujic M, Rafati N, Pejler G Allergy 75 (7) 1776-1780 2020-07-00 2020-02-12
Comparison of spleen transcriptomes of two wild rodent species reveals differences in the immune response against Borrelia afzelii. Zhong X, Lundberg M, Råberg L Ecol Evol 10 (13) 6421-6434 2020-07-00 2020-05-25
Base-pair conformational switch modulates miR-34a targeting of Sirt1 mRNA. Baronti L, Guzzetti I, Ebrahimi P, ..., Chen AA, Petzold K Nature 583 (7814) 139-144 2020-07-00 2020-05-27
Accounting for environmental variation in co-occurrence modelling reveals the importance of positive interactions in root-associated fungal communities. Abrego N, Roslin T, Huotari T, ..., Schmidt NM, Ovaskainen O Mol. Ecol. 29 (14) 2736-2746 2020-07-00 2020-07-04
A framework to assess the quality and impact of bioinformatics training across ELIXIR. Gurwitz KT, Singh Gaur P, Bellis LJ, ..., Morgan SL, Rustici G PLoS Comput. Biol. 16 (7) e1007976 2020-07-00 2020-07-23
A Sample Preparation Protocol for High Throughput Immunofluorescence of Suspension Cells on an Adherent Surface. Bäckström A, Kugel L, Gnann C, ..., Lundberg E, Stadler C J. Histochem. Cytochem. 68 (7) 473-489 2020-07-00 2020-06-20
High content drug screening for Fanconi anemia therapeutics. Montanuy H, Camps-Fajol C, Carreras-Puigvert J, ..., Minguillón J, Surrallés J Orphanet J Rare Dis 15 (1) 170 2020-06-30 2020-06-30
Genome assembly of the basket willow, Salix viminalis, reveals earliest stages of sex chromosome expansion. Almeida P, Proux-Wera E, Churcher A, ..., Berlin S, Mank JE BMC Biol. 18 (1) 78 2020-06-30 2020-06-30
An efficient single-cell transcriptomics workflow for microbial eukaryotes benchmarked on Giardia intestinalis cells. Onsbring H, Tice AK, Barton BT, Brown MW, Ettema TJG BMC Genomics 21 (1) 448 2020-06-29 2020-06-29
Whole genome sequencing of familial isolated oesophagus atresia uncover shared structural variants. Klar J, Engstrand-Lilja H, Maqbool K, ..., Feuk L, Dahl N BMC Med Genomics 13 (1) 85 2020-06-26 2020-06-26
Evolutionary History of the Marchantia polymorpha Complex. Linde AM, Sawangproh W, Cronberg N, Szövényi P, Lagercrantz U Front Plant Sci 11 (-) 829 2020-06-26 2020-06-26
CAM-Delam: an in vivo approach to visualize and quantify the delamination and invasion capacity of human cancer cells. Palaniappan TK, Šlekienė L, Jonasson AK, Gilthorpe J, Gunhaga L Sci Rep 10 (1) 10472 2020-06-26 2020-06-26
RNA-seq reveals altered gene expression levels in proximal tubular cell cultures compared to renal cortex but not during early glucotoxicity. Nilsson LM, Castresana-Aguirre M, Scott L, Brismar H Sci Rep 10 (1) 10390 2020-06-25 2020-06-25
A site-specific self-assembled light-up rotor probe for selective recognition and stabilization of c-MYC G-quadruplex DNA. Deiana M, Chand K, Jamroskovic J, ..., Chorell E, Sabouri N Nanoscale 12 (24) 12950-12957 2020-06-25 2020-06-12
Whole-genome sequence association analysis of blood proteins in a longitudinal wellness cohort. Zhong W, Gummesson A, Tebani A, ..., Fagerberg L, Uhlén M Genome Med 12 (1) 53 2020-06-23 2020-06-23
Skeletal Muscle Transcriptomic Comparison between Long-Term Trained and Untrained Men and Women. Chapman MA, Arif M, Emanuelsson EB, ..., Mardinoglu A, Sundberg CJ Cell Rep 31 (12) 107808 2020-06-23 2020-06-25
Amyloid precursor protein-b facilitates cell adhesion during early development in zebrafish. Banote RK, Chebli J, Şatır TM, ..., Abramsson A, Zetterberg H Sci Rep 10 (1) 10127 2020-06-23 2020-06-23
Altered levels of CSF proteins in patients with FTD, presymptomatic mutation carriers and non-carriers. Remnestål J, Öijerstedt L, Ullgren A, ..., Graff C, Nilsson P Transl Neurodegener 9 (1) 27 2020-06-23 2020-06-23
Decreased detection of ESBL- or pAmpC-producing Escherichia coli in broiler breeders imported into Sweden. Nilsson O, Börjesson S, Landén A, Greko C, Bengtsson B Acta Vet. Scand. 62 (1) 33 2020-06-22 2020-06-22
Accelerated Nuclear Magnetic Resonance Spectroscopy with Deep Learning. Qu X, Huang Y, Lu H, ..., Orekhov V, Chen Z Angew. Chem. Int. Ed. Engl. 59 (26) 10297-10300 2020-06-22 2020-04-15
T2 and T17 cytokines alter the cargo and function of airway epithelium-derived extracellular vesicles. Ax E, Jevnikar Z, Cvjetkovic A, ..., Rådinger M, Lässer C Respir. Res. 21 (1) 155 2020-06-19 2020-06-19
Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation. Tobiasson V, Amunts A Elife 9 (-) 1-15 2020-06-18 2020-06-18
Removal of H2Aub1 by ubiquitin-specific proteases 12 and 13 is required for stable Polycomb-mediated gene repression in Arabidopsis. Kralemann LEM, Liu S, Trejo-Arellano MS, ..., Köhler C, Hennig L Genome Biol. 21 (1) 144 2020-06-16 2020-06-16
Chanjo: Clincal grade sequence coverage analysis Andeer R, Magnusson M, Wedell A, Stranneheim H F1000Res 9 (-) 615 2020-06-16 2020-06-16
Aβ(1-42) tetramer and octamer structures reveal edge conductivity pores as a mechanism for membrane damage. Ciudad S, Puig E, Botzanowski T, ..., Bardiaux B, Carulla N Nat Commun 11 (1) 3014 2020-06-15 2020-06-15
Integrated transcriptomic and genomic analysis improves prediction of complete remission and survival in elderly patients with acute myeloid leukemia. Österroos A, Björklund M, Eriksson A, ..., Grönberg H, Lehmann S Blood Cancer J 10 (6) 67 2020-06-11 2020-06-11
Illuminating Genetic Mysteries of the Dead Sea Scrolls. Anava S, Neuhof M, Gingold H, ..., Jakobsson M, Rechavi O Cell 181 (6) 1218-1231.e27 2020-06-11 2020-06-02
Distinct pre-initiation steps in human mitochondrial translation. Khawaja A, Itoh Y, Remes C, ..., Amunts A, Rorbach J Nat Commun 11 (1) 2932 2020-06-10 2020-06-10
Whole-genome sequencing of glioblastoma reveals enrichment of non-coding constraint mutations in known and novel genes. Sakthikumar S, Roy A, Haseeb L, ..., Lindblad-Toh K, Forsberg-Nilsson K Genome Biol. 21 (1) 127 2020-06-09 2020-06-09
Sales of antibiotics and occurrence of resistance in Sweden Swedres-Svarm 19088 (-) 1-128 2020-06-09 2020-06-09
High genomic-based predicted strain coverage among invasive meningococcal isolates when combining Bexsero and Trumenba vaccines. Säll O, Olofsson E, Jacobsson S Vaccine 38 (28) 4374-4378 2020-06-09 2020-05-12
CYCLIN-B1/2 and -D1 act in opposition to coordinate cortical progenitor self-renewal and lineage commitment. Hagey DW, Topcic D, Kee N, ..., Perlmann T, Muhr J Nat Commun 11 (1) 2898 2020-06-09 2020-06-09
The regulation and pharmacological modulation of immune complex induced type III IFN production by plasmacytoid dendritic cells. Hjorton K, Hagberg N, Pucholt P, Eloranta ML, Rönnblom L Arthritis Res. Ther. 22 (1) 130 2020-06-05 2020-06-05
LPS-treatment of bovine endometrial epithelial cells causes differential DNA methylation of genes associated with inflammation and endometrial function. Jhamat N, Niazi A, Guo Y, ..., Andersson G, Humblot P BMC Genomics 21 (1) 385 2020-06-03 2020-06-03
Radiation Triggers a Dynamic Sequence of Transient Microglial Alterations in Juvenile Brain. Osman AM, Sun Y, Burns TC, ..., Kele J, Blomgren K Cell Rep 31 (9) 107699 2020-06-02 2020-06-04
Vegetation type determines spore deposition within a forest-agricultural mosaic landscape. Redondo MA, Berlin A, Boberg J, Oliva J FEMS Microbiol. Ecol. 96 (6) - 2020-06-01 2020-05-02
Normal murine respiratory tract has its mucus concentrated in clouds based on the Muc5b mucin. Fakih D, Rodriguez-Piñeiro AM, Trillo-Muyo S, ..., Ermund A, Hansson GC Am J Physiol Lung Cell Mol Physiol 318 (6) L1270-L1279 2020-06-01 2020-04-29
In-plate toxicometabolomics of single zebrafish embryos. Ribbenstedt A, Posselt M, Brunius C, Benskin JP Mol Omics 16 (3) 185-194 2020-06-01 2020-03-19
Genomic analysis and antimicrobial resistance of Neisseria gonorrhoeae isolates from Vietnam in 2011 and 2015-16. Lan PT, Golparian D, Ringlander J, ..., Van Thuong N, Unemo M J. Antimicrob. Chemother. 75 (6) 1432-1438 2020-06-01 2020-02-19
Evolutionary Analysis of the Bacillus subtilis Genome Reveals New Genes Involved in Sporulation. Shi L, Derouiche A, Pandit S, ..., Vlahoviček K, Mijakovic I Mol. Biol. Evol. 37 (6) 1667-1678 2020-06-01 2020-02-16
The mating type system of the rare polypore Hapalopilus croceus Redr D, Dahlberg A, Stenlid J, ..., Vasaitis R, Menkis A Fungal Ecology 45 (-) 100941 2020-06-00 2020-06-00
Size-Dependent Pulmonary Impact of Thin Graphene Oxide Sheets in Mice: Toward Safe-by-Design. Rodrigues AF, Newman L, Jasim D, ..., Kostarelos K, Bussy C Adv Sci (Weinh) 7 (12) 1903200 2020-06-00 2020-05-07
Single-cell RNA counting at allele and isoform resolution using Smart-seq3. Hagemann-Jensen M, Ziegenhain C, Chen P, ..., Faridani OR, Sandberg R Nat. Biotechnol. 38 (6) 708-714 2020-06-00 2020-05-04
Predicting and elucidating the etiology of fatty liver disease: A machine learning modeling and validation study in the IMI DIRECT cohorts. Atabaki-Pasdar N, Ohlsson M, Viñuela A, ..., Pavo I, Franks PW PLoS Med. 17 (6) e1003149 2020-06-00 2020-06-19
Normal Testosterone but Higher Luteinizing Hormone Plasma Levels in Men With Hypersexual Disorder. Chatzittofis A, Boström AE, Öberg KG, ..., Arver S, Jokinen J Sex Med 8 (2) 243-250 2020-06-00 2020-03-12
New approaches to the study of immune responses in humans. Brodin P Hum. Genet. 139 (6-7) 795-799 2020-06-00 2020-02-10
Mitochondrial genomes from Bronze Age Poland reveal genetic continuity from the Late Neolithic and additional genetic affinities with the steppe populations. Juras A, Makarowicz P, Chyleński M, ..., Jakobsson M, Dabert M Am. J. Phys. Anthropol. 172 (2) 176-188 2020-06-00 2020-04-15
MYO5B mutations in pheochromocytoma/paraganglioma promote cancer progression. Tomić TT, Olausson J, Rehammar A, ..., Wassén ON, Abel F PLoS Genet. 16 (6) e1008803 2020-06-00 2020-06-08
Genome-wide CRISPR screen identifies ZIC2 as an essential gene that controls the cell fate of early mesodermal precursors to human heart progenitors. Xu J, Zhou C, Foo KS, ..., Sahara M, Chien KR Stem Cells 38 (6) 741-755 2020-06-00 2020-03-10
DEqMS: A Method for Accurate Variance Estimation in Differential Protein Expression Analysis. Zhu Y, Orre LM, Zhou Tran Y, ..., Anders S, Lehtiö J Mol. Cell Proteomics 19 (6) 1047-1057 2020-06-00 2020-03-23
Benchmarking single-cell RNA-sequencing protocols for cell atlas projects. Mereu E, Lafzi A, Moutinho C, ..., Stegle O, Heyn H Nat. Biotechnol. 38 (6) 747-755 2020-06-00 2020-04-06
Balancing selection in Pattern Recognition Receptor signalling pathways is associated with gene function and pleiotropy in a wild rodent. Lundberg M, Zhong X, Konrad A, Olsen RA, Råberg L Mol. Ecol. 29 (11) 1990-2003 2020-06-00 2020-06-03
An immune gene expression signature distinguishes central nervous system metastases from primary tumours in non-small-cell lung cancer. Tsakonas G, Lewensohn R, Botling J, ..., Hydbring P, Ekman S Eur. J. Cancer 132 (-) 24-34 2020-06-00 2020-04-20
Age-of-onset information helps identify 76 genetic variants associated with allergic disease. Ferreira MAR, Vonk JM, Baurecht H, ..., Lee Y, Koppelman GH PLoS Genet. 16 (6) e1008725 2020-06-00 2020-06-30
Activated carbon stimulates microbial diversity and PAH biodegradation under anaerobic conditions in oil-polluted sediments. Bonaglia S, Broman E, Brindefalk B, ..., Udekwu K, Gunnarsson JS Chemosphere 248 (-) 126023 2020-06-00 2020-01-24
Restoration of KMT2C/MLL3 in human colorectal cancer cells reinforces genome-wide H3K4me1 profiles and influences cell growth and gene expression. Larsson C, Cordeddu L, Siggens L, ..., Ekwall K, Sjöblom T Clin Epigenetics 12 (1) 74 2020-05-29 2020-05-29
In silico Druggability Assessment of the NUDIX Hydrolase Protein Family as a Workflow for Target Prioritization. Michel M, Homan EJ, Wiita E, ..., Helleday T, Warpman Berglund U Front. Chem. 8 (-) 443 2020-05-29 2020-05-29
Transitions in wheat endosperm metabolism upon transcriptional induction of oil accumulation by oat endosperm WRINKLED1. Grimberg Å, Wilkinson M, Snell P, ..., Shewry P, Hofvander P BMC Plant Biol. 20 (1) 235 2020-05-25 2020-05-25
Staphylococcus argenteus as an etiological agent of prosthetic hip joint infection: a case presentation. Söderquist B, Wildeman P, Stenmark B, Stegger M J Bone Jt Infect 5 (4) 172-175 2020-05-25 2020-05-25
Auxin export from proximal fruits drives arrest in temporally competent inflorescences Ware A, Walker CH, Šimura J, ..., Wilson ZA, Bennett T NPLANTS 6 (6) 699-707 2020-05-25 2020-05-25
Multi-ancestry GWAS of the electrocardiographic PR interval identifies 202 loci underlying cardiac conduction. Ntalla I, Weng LC, Cartwright JH, ..., Lubitz SA, Munroe PB Nat Commun 11 (1) 2542 2020-05-21 2020-05-21
Integration of whole-body [18F]FDG PET/MRI with non-targeted metabolomics can provide new insights on tissue-specific insulin resistance in type 2 diabetes. Diamanti K, Visvanathar R, Pereira MJ, ..., Wadelius C, Ahlström H Sci Rep 10 (1) 8343 2020-05-20 2020-05-20
Comprehensive metabolomics analysis of prostate cancer tissue in relation to tumor aggressiveness and TMPRSS2-ERG fusion status. Dudka I, Thysell E, Lundquist K, ..., Wikström P, Gröbner G BMC Cancer 20 (1) 437 2020-05-18 2020-05-18
Behavioral Characterization of dmrt3a Mutant Zebrafish Reveals Crucial Aspects of Vertebrate Locomotion through Phenotypes Related to Acceleration. Del Pozo A, Manuel R, Iglesias Gonzalez AB, ..., Kullander K, Boije H eNeuro 7 (3) ENEURO.0047-20.2020 2020-05-18 2020-05-18
Single cell transcriptomics identifies stem cell-derived graft composition in a model of Parkinson's disease. Tiklová K, Nolbrant S, Fiorenzano A, ..., Perlmann T, Parmar M Nat Commun 11 (1) 2434 2020-05-15 2020-05-15
Myocardial micro-biopsy procedure for molecular characterization with increased precision and reduced trauma. Grankvist R, Chireh A, Sandell M, ..., Daub CO, Holmin S Sci Rep 10 (1) 8029 2020-05-15 2020-05-15
Alterations of endometrial epithelial-mesenchymal transition and MAPK signalling components in women with PCOS are partially modulated by metformin in vitro. Hu M, Zhang Y, Li X, ..., Shao LR, Billig H Mol. Hum. Reprod. 26 (5) 312-326 2020-05-15 2020-03-24
Integrative genomics approach identifies molecular features associated with early-stage ovarian carcinoma histotypes. Engqvist H, Parris TZ, Biermann J, ..., Karlsson P, Helou K Sci Rep 10 (1) 7946 2020-05-14 2020-05-14
Genetic and environmental influences on human height from infancy through adulthood at different levels of parental education. Jelenkovic A, Sund R, Yokoyama Y, ..., Kaprio J, Silventoinen K Sci Rep 10 (1) 7974 2020-05-14 2020-05-14
Interphase Design of Cellulose Nanocrystals/Poly(hydroxybutyrate-ran-valerate) Bionanocomposites for Mechanical and Thermal Properties Tuning. Magnani C, Idström A, Nordstierna L, ..., Raquez JM, Lo Re G Biomacromolecules 21 (5) 1892-1901 2020-05-11 2020-03-04
Altered Thermal and Mechanical Properties of Spruce Galactoglucomannan Films Modified with an Etherification Reaction. Härdelin L, Bernin D, Börjesson M, Ström A, Larsson A Biomacromolecules 21 (5) 1832-1840 2020-05-11 2020-03-18
Srebf1 Controls Midbrain Dopaminergic Neurogenesis. Toledo EM, Yang S, Gyllborg D, ..., Linnarsson S, Arenas E Cell Rep 31 (5) 107601 2020-05-05 2020-05-07
High-Resolution In Situ NMR Spectroscopy of Bacterial Envelope Proteins in Outer Membrane Vesicles. Thoma J, Burmann BM Biochemistry 59 (17) 1656-1660 2020-05-05 2020-04-06
A progressive and complex clinical course in two family members with ERF-related craniosynostosis: a case report. Körberg I, Nowinski D, Bondeson ML, ..., Kölby L, Stattin EL BMC Med. Genet. 21 (1) 90 2020-05-05 2020-05-05
Lipid accumulation controls the balance between surface connection and scission of caveolae. Hubert M, Larsson E, Vegesna NVG, ..., Moodie LW, Lundmark R Elife 9 (-) - 2020-05-04 2020-05-04
Rare variants in dynein heavy chain genes in two individuals with situs inversus and developmental dyslexia: a case report. Bieder A, Einarsdottir E, Matsson H, ..., Kere J, Tapia-Páez I BMC Med. Genet. 21 (1) 87 2020-05-01 2020-05-01
Molecular changes during progression from nonmuscle invasive to advanced urothelial carcinoma. Sjödahl G, Eriksson P, Patschan O, ..., Liedberg F, Höglund M Int. J. Cancer 146 (9) 2636-2647 2020-05-01 2019-11-14
Isolation and characterization of microvesicles from mesenchymal stem cells. Mohammadi MR, Riazifar M, Pone EJ, ..., Lotvall J, Zhao W Methods 177 (-) 50-57 2020-05-01 2019-10-25
Extracellular vesicles from mast cells induce mesenchymal transition in airway epithelial cells. Yin Y, Shelke GV, Lässer C, Brismar H, Lötvall J Respir. Res. 21 (1) 101 2020-05-01 2020-05-01
Evolution of a New Function by Fusion between Phage DNA and a Bacterial Gene. Warsi O, Knopp M, Surkov S, Jerlström Hultqvist J, Andersson DI Mol. Biol. Evol. 37 (5) 1329-1341 2020-05-01 2020-01-25
Differential Expression of Immune Genes between Two Closely Related Beetle Species with Different Immunocompetence following Attack by Asecodes parviclava. Yang X, Fors L, Slotte T, ..., Wheat CW, Hambäck PA Genome Biol Evol 12 (5) 522-534 2020-05-01 2020-04-14
Whole-genome sequencing reveals complex chromosome rearrangement disrupting NIPBL in infant with Cornelia de Lange syndrome. Plesser Duvdevani M, Pettersson M, Eisfeldt J, ..., Lindstrand A, Harel T Am. J. Med. Genet. A 182 (5) 1143-1151 2020-05-00 2020-03-03
Whole-genome sequencing of human remains to enable genealogy DNA database searches - A case report. Tillmar A, Sjölund P, Lundqvist B, ..., Älgenäs C, Green H Forensic Sci Int Genet 46 (-) 102233 2020-05-00 2020-01-17
Transcriptome profiling of Ewing sarcomas - treatment resistance pathways and IGF-dependency. Chen Y, Hesla AC, Lin Y, ..., Larsson O, Haglund F Mol Oncol 14 (5) 1101-1117 2020-05-00 2020-03-13
SweHLA: the high confidence HLA typing bio-resource drawn from 1000 Swedish genomes. Nordin J, Ameur A, Lindblad-Toh K, Gyllensten U, Meadows JRS Eur. J. Hum. Genet. 28 (5) 627-635 2020-05-00 2019-12-16
Recurrent Fusions Between YAP1 and KMT2A in Morphologically Distinct Neoplasms Within the Spectrum of Low-grade Fibromyxoid Sarcoma and Sclerosing Epithelioid Fibrosarcoma. Puls F, Agaimy A, Flucke U, ..., Arbajian E, Mertens F Am. J. Surg. Pathol. 44 (5) 594-606 2020-05-00 2020-01-09
Parentage and relatedness reconstruction in Pinus sylvestris using genotyping-by-sequencing. Hall D, Zhao W, Wennström U, Andersson Gull B, Wang XR Heredity (Edinb) 124 (5) 633-646 2020-05-00 2020-03-02
Next-Generation Sequencing Reveals Differential Responses to Acute versus Long-Term Exposures to Graphene Oxide in Human Lung Cells. Mukherjee SP, Gupta G, Klöditz K, ..., Kostarelos K, Fadeel B Small 16 (21) e1907686 2020-05-00 2020-03-29
Monitoring calcium-induced epidermal differentiation in vitro using multiphoton microscopy. Malak M, Grantham J, Ericson MB J Biomed Opt 25 (7) 1-11 2020-05-00 2020-05-11
In-depth plasma proteomics reveals increase in circulating PD-1 during anti-PD-1 immunotherapy in patients with metastatic cutaneous melanoma. Babačić H, Lehtiö J, Pico de Coaña Y, Pernemalm M, Eriksson H J Immunother Cancer 8 (1) e000204 2020-05-00 2020-05-28
Genetic identification of cell types underlying brain complex traits yields insights into the etiology of Parkinson's disease. Bryois J, Skene NG, Hansen TF, ..., Hjerling-Leffler J, Sullivan PF Nat. Genet. 52 (5) 482-493 2020-05-00 2020-04-27
Early growth response 1 regulates hematopoietic support and proliferation in human primary bone marrow stromal cells. Li H, Lim HC, Zacharaki D, ..., Hansson J, Scheding S Haematologica 105 (5) 1206-1215 2020-05-00 2019-08-01
Deep sequencing of myxoinflammatory fibroblastic sarcoma. Arbajian E, Hofvander J, Magnusson L, Mertens F Genes Chromosomes Cancer 59 (5) 309-317 2020-05-00 2020-01-31
Comprehensive chemical proteomics for target deconvolution of the redox active drug auranofin. Saei AA, Gullberg H, Sabatier P, ..., Arnér ESJ, Zubarev RA Redox Biol 32 (-) 101491 2020-05-00 2020-03-03
Analysis of DNA methylation patterns in the tumor immune microenvironment of metastatic melanoma. Mitra S, Lauss M, Cabrita R, ..., Brown KM, Jönsson G Mol Oncol 14 (5) 933-950 2020-05-00 2020-03-21
A molecular mechanism explaining albuminuria in kidney disease. Butt L, Unnersjö-Jess D, Höhne M, ..., Schermer B, Benzing T Nat Metab 2 (5) 461-474 2020-05-00 2020-05-11
Interactive proteogenomic exploration of response to Fusarium head blight in oat varieties with different resistance. Willforss J, Leonova S, Tillander J, ..., Chawade A, Levander F J Proteomics 218 (-) 103688 2020-04-30 2020-02-14
Interactions of the Lysosomotropic Detergent O-Methyl-Serine Dodecylamide Hydrochloride (MSDH) with Lipid Bilayer Membranes-Implications for Cell Toxicity. Villamil Giraldo AM, Eriksson I, Wennmalm S, ..., Ederth T, Öllinger K Int J Mol Sci 21 (9) 3136 2020-04-29 2020-04-29
Fungal Diversity in the Phyllosphere of Pinus heldreichii H. Christ—An Endemic and High-Altitude Pine of the Mediterranean Region Lazarević J, Menkis A Diversity 12 (5) 172 2020-04-28 2020-04-28
DNA methylation and copy number variation profiling of T-cell lymphoblastic leukemia and lymphoma. Haider Z, Landfors M, Golovleva I, ..., Hultdin M, Degerman S Blood Cancer J 10 (4) 45 2020-04-28 2020-04-28
Biodiversity between sand grains: Meiofauna composition across southern and western Sweden assessed by metabarcoding. Atherton S, Jondelius U Biodivers Data J 8 (-) e51813 2020-04-27 2020-04-27
Mending Fences: Na,K-ATPase signaling via Ca2+ in the maintenance of epithelium integrity. Aperia A, Brismar H, Uhlén P Cell Calcium 88 (-) 102210 2020-04-26 2020-04-26
Low occurrence of extended-spectrum cephalosporinase producing Enterobacteriaceae and no detection of methicillin-resistant coagulase-positive staphylococci in healthy dogs in Sweden. Börjesson S, Gunnarsson L, Landén A, Grönlund U Acta Vet. Scand. 62 (1) 18 2020-04-25 2020-04-25
Optimization of Tetrahydroindazoles as Inhibitors of Human Dihydroorotate Dehydrogenase and Evaluation of Their Activity and In Vitro Metabolic Stability. Popova G, Ladds MJGW, Johansson L, ..., Yngve U, Lain S J. Med. Chem. 63 (8) 3915-3934 2020-04-23 2020-04-08
Trade-off between somatic and germline repair in a vertebrate supports the expensive germ line hypothesis. Chen HY, Jolly C, Bublys K, Marcu D, Immler S Proc. Natl. Acad. Sci. U.S.A. 117 (16) 8973-8979 2020-04-21 2020-04-03
Studies of Emission Processes of Polymer Additives into Water Using Quartz Crystal Microbalance-A Case Study on Organophosphate Esters. Xiao L, Zheng Z, Irgum K, Andersson PL Environ. Sci. Technol. 54 (8) 4876-4885 2020-04-21 2020-04-01
Solution Conformations Explain the Chameleonic Behaviour of Macrocyclic Drugs. Danelius E, Poongavanam V, Peintner S, ..., Erdélyi M, Kihlberg J Chemistry 26 (23) 5231-5244 2020-04-21 2020-04-06
Molecular profiling of driver events in metastatic uveal melanoma. Karlsson J, Nilsson LM, Mitra S, ..., Olofsson Bagge R, Nilsson JA Nat Commun 11 (1) 1894 2020-04-20 2020-04-20
Long-term stability of partial nitritation-anammox for treatment of municipal wastewater in a moving bed biofilm reactor pilot system. Gustavsson DJI, Suarez C, Wilén BM, Hermansson M, Persson F Sci. Total Environ. 714 (-) 136342 2020-04-20 2020-01-07
Effect of Cobalt, Nickel, and Selenium/Tungsten Deficiency on Mesophilic Anaerobic Digestion of Chemically Defined Soluble Organic Compounds. Šafarič L, Yekta SS, Svensson BH, ..., Bastviken D, Björn A Microorganisms 8 (4) 598 2020-04-20 2020-04-20
Fungi and Oomycetes in the Irrigation Water of Forest Nurseries Marčiulynas A, Marčiulynienė D, Lynikienė J, ..., Vaičiukynė M, Menkis A Forests 11 (4) 459 2020-04-18 2020-04-18
Rapid Biophysical Characterization and NMR Spectroscopy Structural Analysis of Small Proteins from Bacteria and Archaea. Kubatova N, Pyper DJ, Jonker HRA, ..., Schmitz RA, Schwalbe H ChemBioChem 21 (8) 1178-1187 2020-04-17 2020-01-21
Genome-Scale Metabolic Modeling of Glioblastoma Reveals Promising Targets for Drug Development. Larsson I, Uhlén M, Zhang C, Mardinoglu A Front Genet 11 (-) 381 2020-04-17 2020-04-17
Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs. Bianchi M, Rafati N, Karlsson Å, ..., Lindblad-Toh K, Rosengren Pielberg G BMC Genomics 21 (1) 307 2020-04-16 2020-04-16
Capsid Structure of a Marine Algal Virus of the Order Picornavirales. Munke A, Kimura K, Tomaru Y, Okamoto K J. Virol. 94 (9) - 2020-04-16 2020-04-16
The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences. Drysdale R, Cook CE, Petryszak R, ..., Durinx C, McEntyre J Bioinformatics 36 (8) 2636-2642 2020-04-15 2020-01-18
Increased burden of ultra-rare structural variants localizing to boundaries of topologically associated domains in schizophrenia. Halvorsen M, Huh R, Oskolkov N, ..., Sullivan PF, Szatkiewicz JP Nat Commun 11 (1) 1842 2020-04-15 2020-04-15
Effect of sample preparation techniques upon single cell chemical imaging: A practical comparison between synchrotron radiation based X-ray fluorescence (SR-XRF) and Nanoscopic Secondary Ion Mass Spectrometry (nano-SIMS). De Samber B, De Rycke R, De Bruyne M, ..., Polerecky L, Vincze L Anal. Chim. Acta 1106 (-) 22-32 2020-04-15 2020-01-24
Difference in virulence between Neisseria meningitidis serogroups W and Y in transgenic mice. Eriksson L, Stenmark B, Deghmane A, ..., Mölling P, Taha M BMC Microbiol. 20 (1) 92 2020-04-15 2020-04-15
Automation of Spatial Transcriptomics library preparation to enable rapid and robust insights into spatial organization of tissues. Berglund E, Saarenpää S, Jemt A, ..., Lundeberg J, Giacomello S BMC Genomics 21 (1) 298 2020-04-15 2020-04-15
Generation of Retinal Pigment Epithelial Cells Derived from Human Embryonic Stem Cells Lacking Human Leukocyte Antigen Class I and II. Petrus-Reurer S, Winblad N, Kumar P, ..., Kvanta A, Lanner F Stem Cell Reports 14 (4) 648-662 2020-04-14 2020-03-19
MutT homologue 1 (MTH1) removes N6-methyl-dATP from the dNTP pool. Scaletti ER, Vallin KS, Bräutigam L, ..., Stenmark P, Jemth AS J. Biol. Chem. 295 (15) 4761-4772 2020-04-10 2020-03-06
Ex Vivo Organoid Cultures Reveal the Importance of the Tumor Microenvironment for Maintenance of Colorectal Cancer Stem Cells. Li X, Larsson P, Ljuslinder I, ..., Edin S, Palmqvist R Cancers (Basel) 12 (4) 923 2020-04-10 2020-04-10
Hybrid Aspen Expressing a Carbohydrate Esterase Family 5 Acetyl Xylan Esterase Under Control of a Wood-Specific Promoter Shows Improved Saccharification. Wang Z, Pawar PM, Derba-Maceluch M, ..., Jönsson LJ, Mellerowicz EJ Front Plant Sci 11 (-) 380 2020-04-08 2020-04-08
Building blocks are synthesized on demand during the yeast cell cycle. Campbell K, Westholm J, Kasvandik S, ..., Mormino M, Nielsen J Proc. Natl. Acad. Sci. U.S.A. 117 (14) 7575-7583 2020-04-07 2020-03-25
The honeybee (Apis mellifera) developmental state shapes the genetic composition of the deformed wing virus-A quasispecies during serial transmission. Yañez O, Chávez-Galarza J, Tellgren-Roth C, ..., Neumann P, de Miranda JR Sci Rep 10 (1) 5956 2020-04-06 2020-04-06
Draft Genome Sequence of the Urinary Catheter Isolate Enterobacter ludwigii CEB04 with High Biofilm Forming Capacity. Shafeeq S, Wang X, Lünsdorf H, Brauner A, Römling U Microorganisms 8 (4) 522 2020-04-05 2020-04-05
The conifer root rot pathogens Heterobasidion irregulare and Heterobasidion occidentale employ different strategies to infect Norway spruce. Hu Y, Elfstrand M, Stenlid J, Durling MB, Olson Å Sci Rep 10 (1) 5884 2020-04-03 2020-04-03
Plant resistance does not compromise parasitoid-based biocontrol of a strawberry pest. Weber D, Egan PA, Muola A, Ericson LE, Stenberg JA Sci Rep 10 (1) 5899 2020-04-03 2020-04-03
Guidelines for curriculum and course development in higher education and training Tractenberg RE, Lindvall JM, Attwood T, Via A - - (-) - 2020-04-03 2020-04-03
Genomic characterization and outcome of prosthetic joint infections caused by Staphylococcus aureus. Wildeman P, Tevell S, Eriksson C, ..., Söderquist B, Stenmark B Sci Rep 10 (1) 5938 2020-04-03 2020-04-03
Thermal Proteome Profiling Identifies Oxidative-Dependent Inhibition of the Transcription of Major Oncogenes as a New Therapeutic Mechanism for Select Anticancer Compounds. Peuget S, Zhu J, Sanz G, ..., Zubarev R, Selivanova G Cancer Res. 80 (7) 1538-1550 2020-04-01 2020-02-04
Paralogization and New Protein Architectures in Planctomycetes Bacteria with Complex Cell Structures. Mahajan M, Yee B, Hägglund E, ..., Fuerst JA, Andersson SGE Mol. Biol. Evol. 37 (4) 1020-1040 2020-04-01 2019-12-07
Lung developmental arrest caused by PDGF-A deletion: consequences for the adult mouse lung. Gouveia L, Kraut S, Hadzic S, ..., Betsholtz C, Andrae J Am J Physiol Lung Cell Mol Physiol 318 (4) L831-L843 2020-04-01 2020-03-18
Extensive Clonal Branching Shapes the Evolutionary History of High-Risk Pediatric Cancers. Andersson N, Bakker B, Karlsson J, ..., Foijer F, Gisselsson D Cancer Res. 80 (7) 1512-1523 2020-04-01 2020-02-10
Effects of whole-grain wheat, rye, and lignan supplementation on cardiometabolic risk factors in men with metabolic syndrome: a randomized crossover trial. Eriksen AK, Brunius C, Mazidi M, ..., Dicksved J, Landberg R Am. J. Clin. Nutr. 111 (4) 864-876 2020-04-01 2020-02-26
Development of basic building blocks for cryo-EM: the emcore and emvis software libraries. de la Rosa-Trevín JM, Hernández Viga PA, Otón J, Lindahl E Acta Crystallogr D Struct Biol 76 (Pt 4) 350-356 2020-04-01 2020-03-31
The acute effect of metabolic cofactor supplementation: a potential therapeutic strategy against non-alcoholic fatty liver disease. Zhang C, Bjornson E, Arif M, ..., Borén J, Mardinoglu A Mol. Syst. Biol. 16 (4) e9495 2020-04-00 2020-04-28
Substantial intrinsic variability in chemoradiosensitivity of newly established anaplastic thyroid cancer cell-lines. Gretarsson S, Nygren A, Rosendahl AH, ..., Wennerberg J, Ekblad L Acta Otolaryngol. 140 (4) 337-343 2020-04-00 2020-01-10
Simultaneous mass spectrometry imaging of multiple neuropeptides in the brain and alterations induced by experimental parkinsonism and L-DOPA therapy. Hulme H, Fridjonsdottir E, Gunnarsdottir H, ..., Svenningsson P, Andrén PE Neurobiol. Dis. 137 (-) 104738 2020-04-00 2020-01-10
Screening for autoantibody targets in post-vaccination narcolepsy using proteome arrays. Lind A, Eriksson D, Akel O, ..., Elding Larsson H, Landegren N Scand. J. Immunol. 91 (4) e12864 2020-04-00 2020-02-13
Polymerase IV Plays a Crucial Role in Pollen Development in Capsella. Wang Z, Butel N, Santos-González J, ..., Martinez G, Köhler C Plant Cell 32 (4) 950-966 2020-04-00 2020-01-27
Molecular characterization of a large unselected cohort of metastatic colorectal cancers in relation to primary tumor location, rare metastatic sites and prognosis. Nunes L, Aasebø K, Mathot L, ..., Sjöblom T, Glimelius B Acta Oncol 59 (4) 417-426 2020-04-00 2020-01-10
Long-term application of Swedish sewage sludge on farmland does not cause clear changes in the soil bacterial resistome. Rutgersson C, Ebmeyer S, Lassen SB, ..., Flach CF, Larsson DGJ Environ Int 137 (-) 105339 2020-04-00 2020-02-06
Genes and variants in hematopoiesis-related pathways are associated with gemcitabine/carboplatin-induced thrombocytopenia. Björn N, Sigurgeirsson B, Svedberg A, ..., Lundeberg J, Gréen H Pharmacogenomics J. 20 (2) 179-191 2020-04-00 2019-10-15
Establishing Trypanosoma cruzi farnesyl pyrophosphate synthase as a viable target for biosensor driven fragment-based lead discovery. Opassi G, Nordström H, Lundin A, ..., Klebe G, Danielson UH Protein Sci. 29 (4) 991-1003 2020-04-00 2020-02-07
Cell Cycle Profiling Reveals Protein Oscillation, Phosphorylation, and Localization Dynamics. Herr P, Boström J, Rullman E, ..., Maddalo G, Altun M Mol. Cell Proteomics 19 (4) 608-623 2020-04-00 2020-02-12
ABCB1 single-nucleotide variants and survival in patients with glioblastoma treated with radiotherapy concomitant with temozolomide. Malmström A, Łysiak M, Åkesson L, ..., Green H, Söderkvist P Pharmacogenomics J. 20 (2) 213-219 2020-04-00 2019-10-17
A Multi-Omics Approach to Liver Diseases: Integration of Single Nuclei Transcriptomics with Proteomics and HiCap Bulk Data in Human Liver. Cavalli M, Diamanti K, Pan G, ..., Komorowski J, Wadelius C OMICS 24 (4) 180-194 2020-04-00 2020-03-16
Transcriptome Profiling and Toxicity Following Long-Term, Low Dose Exposure of Human Lung Cells to Ni and NiO Nanoparticles-Comparison with NiCl2. Gliga AR, Di Bucchianico S, Åkerlund E, Karlsson HL Nanomaterials (Basel) 10 (4) 649 2020-03-31 2020-03-31
Mutations in COL1A1/A2 and CREB3L1 are associated with oligodontia in osteogenesis imperfecta. Andersson K, Malmgren B, Åström E, ..., Taylan F, Dahllöf G Orphanet J Rare Dis 15 (1) 80 2020-03-31 2020-03-31
Identification of cell surface markers and establishment of monolayer differentiation to retinal pigment epithelial cells. Plaza Reyes A, Petrus-Reurer S, Padrell Sánchez S, ..., Kvanta A, Lanner F Nat Commun 11 (1) 1609 2020-03-30 2020-03-30
Antimicrobial peptide and sequence variation along a latitudinal gradient in two anurans. Cortázar-Chinarro M, Meyer-Lucht Y, Van der Valk T, ..., Laurila A, Höglund J BMC Genet. 21 (1) 38 2020-03-30 2020-03-30
Structural basis for the increased processivity of D-family DNA polymerases in complex with PCNA. Madru C, Henneke G, Raia P, ..., Carroni M, Sauguet L Nat Commun 11 (1) 1591 2020-03-27 2020-03-27
Image-Based Morphological Profiling Identifies a Lysosomotropic, Iron-Sequestering Autophagy Inhibitor. Laraia L, Garivet G, Foley DJ, ..., Rodriguez R, Waldmann H Angew. Chem. Int. Ed. Engl. 59 (14) 5721-5729 2020-03-27 2020-01-24
Deficits in Motor Performance, Neurotransmitters and Synaptic Plasticity in Elderly and Experimental Parkinsonian Mice Lacking GPR37. Zhang X, Mantas I, Fridjonsdottir E, ..., Chergui K, Svenningsson P Front Aging Neurosci 12 (-) 84 2020-03-27 2020-03-27
Towards uterus tissue engineering: a comparative study of sheep uterus decellularisation. Tiemann TT, Padma AM, Sehic E, ..., Brännström M, Hellström M Mol. Hum. Reprod. 26 (3) 167-178 2020-03-26 2020-01-26
An mRNA-mRNA Interaction Couples Expression of a Virulence Factor and Its Chaperone in Listeria monocytogenes. Ignatov D, Vaitkevicius K, Durand S, ..., Condon C, Johansson J Cell Rep 30 (12) 4027-4040.e7 2020-03-24 2020-03-27
An atlas of human metabolism. Robinson JL, Kocabaş P, Wang H, ..., Uhlén M, Nielsen J Sci Signal 13 (624) - 2020-03-24 2020-03-24
Marine Sediments Illuminate Chlamydiae Diversity and Evolution. Dharamshi JE, Tamarit D, Eme L, ..., Spang A, Ettema TJG Curr. Biol. 30 (6) 1032-1048.e7 2020-03-23 2020-03-05
Molecular Profiling for Predictors of Radiosensitivity in Patients with Breast or Head-and-Neck Cancer. Drobin K, Marczyk M, Halle M, ..., Schwenk JM, Haghdoost S Cancers (Basel) 12 (3) 753 2020-03-22 2020-03-22
Non-dopaminergic Alterations in Depression-Like FSL Rats in Experimental Parkinsonism and L-DOPA Responses. Schintu N, Zhang X, Stroth N, ..., Andrén PE, Svenningsson P Front Pharmacol 11 (-) 304 2020-03-20 2020-03-20
Discovery of a novel integron-borne aminoglycoside resistance gene present in clinical pathogens by screening environmental bacterial communities. Böhm ME, Razavi M, Marathe NP, Flach CF, Larsson DGJ Microbiome 8 (1) 41 2020-03-20 2020-03-20
Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress. Crawford T, Karamat F, Lehotai N, ..., Strand Å, Björklund S Sci Rep 10 (1) 5073 2020-03-19 2020-03-19
Analysis of the behaviour of confined molecules using 2H T1 nuclear magnetic relaxation dispersion Shamshir A, Sparrman T, Westlund PO Molecular Physics 118 (6) e1645367 2020-03-18 2019-07-24
Newborn Screening for Presymptomatic Diagnosis of Complement and Phagocyte Deficiencies. Dezfouli M, Bergström S, Skattum L, ..., Nilsson P, Hammarström L Front Immunol 11 (-) 455 2020-03-17 2020-03-17
Immune Profiling of Human Gut-Associated Lymphoid Tissue Identifies a Role for Isolated Lymphoid Follicles in Priming of Region-Specific Immunity. Fenton TM, Jørgensen PB, Niss K, ..., Johansson-Lindbom B, Agace WW Immunity 52 (3) 557-570.e6 2020-03-17 2020-03-10
Effects of acute sleep loss on diurnal plasma dynamics of CNS health biomarkers in young men. Benedict C, Blennow K, Zetterberg H, Cedernaes J Neurology 94 (11) e1181-e1189 2020-03-17 2020-01-08
Inherited DNA Repair Gene Mutations in Men with Lethal Prostate Cancer. Rantapero T, Wahlfors T, Kähler A, ..., Schleutker J, Wiklund F Genes 11 (3) 314 2020-03-14 2020-03-14
Ecosystem-wide metagenomic binning enables prediction of ecological niches from genomes. Alneberg J, Bennke C, Beier S, ..., Pinhassi J, Andersson AF Commun Biol 3 (1) 119 2020-03-13 2020-03-13
Comparing the Performance of Microsatellites and RADseq in Population Genetic Studies: Analysis of Data for Pike (Esox lucius) and a Synthesis of Previous Studies. Sunde J, Yıldırım Y, Tibblin P, Forsman A Front Genet 11 (-) 218 2020-03-13 2020-03-13
Exploiting loss of heterozygosity for allele-selective colorectal cancer chemotherapy. Rendo V, Stoimenov I, Mateus A, ..., Cheong I, Sjöblom T Nat Commun 11 (1) 1308 2020-03-11 2020-03-11
Footprints of natural selection at the mannose-6-phosphate isomerase locus in barnacles. Nunez JCB, Flight PA, Neil KB, ..., Blomberg A, Rand DM Proc. Natl. Acad. Sci. U.S.A. 117 (10) 5376-5385 2020-03-10 2020-02-25
Uncovering diversity and metabolic spectrum of animals in dead zone sediments. Broman E, Bonaglia S, Holovachov O, ..., Hall POJ, Nascimento FJA Commun Biol 3 (1) 106 2020-03-06 2020-03-06
Ribonucleotide reductase inhibitors suppress SAMHD1 ara-CTPase activity enhancing cytarabine efficacy. Rudd SG, Tsesmetzis N, Sanjiv K, ..., Helleday T, Herold N EMBO Mol Med 12 (3) e10419 2020-03-06 2020-01-17
An atlas of the protein-coding genes in the human, pig, and mouse brain. Sjöstedt E, Zhong W, Fagerberg L, ..., Uhlén M, Mulder J Science 367 (6482) eaay5947 2020-03-06 2020-03-07
The Molecular Anatomy of Mouse Skin during Hair Growth and Rest. Joost S, Annusver K, Jacob T, ..., Sandberg R, Kasper M Cell Stem Cell 26 (3) 441-457.e7 2020-03-05 2020-02-27
Stressful Beginnings with Long-Term Consequences. Consiglio CR, Brodin P Cell 180 (5) 820-821 2020-03-05 2020-03-07
Short-Range Order and Transport Properties in Mixtures of the Protic Ionic Liquid [C2HIm][TFSI] with Water or Imidazole. Hasani M, Varela LM, Martinelli A J. Phys. Chem. B 124 (9) 1767-1777 2020-03-05 2020-02-20
Genome-wide Association Analysis in Humans Links Nucleotide Metabolism to Leukocyte Telomere Length. Li C, Stoma S, Lotta LA, ..., Langenberg C, Codd V Am. J. Hum. Genet. 106 (3) 389-404 2020-03-05 2020-02-27
Epiphyseal Cartilage Formation Involves Differential Dynamics of Various Cellular Populations During Embryogenesis. Zhang Y, Annusver K, Sunadome K, ..., Adameyko I, Xie M Front Cell Dev Biol 8 (-) 122 2020-03-05 2020-03-05
Transcriptomic resources for evolutionary studies in flat periwinkles and related species. Marques JP, Sotelo G, Galindo J, ..., Hollander J, Faria R Sci Data 7 (1) 73 2020-03-03 2020-03-03
Oral Microbiota Profile Associates with Sugar Intake and Taste Preference Genes. Esberg A, Haworth S, Hasslöf P, Lif Holgerson P, Johansson I Nutrients 12 (3) 681 2020-03-03 2020-03-03
Single-cell analysis of human ovarian cortex identifies distinct cell populations but no oogonial stem cells. Wagner M, Yoshihara M, Douagi I, ..., Lanner F, Damdimopoulou P Nat Commun 11 (1) 1147 2020-03-02 2020-03-02
Metabolomics analyses in non-diabetic middle-aged individuals reveal metabolites impacting early glucose disturbances and insulin sensitivity. Bos MM, Noordam R, Bennett K, ..., Surowiec I, van Heemst D Metabolomics 16 (3) 35 2020-03-02 2020-03-02
Tumor localized agonistic anti-CD40 therapy and beyond. Eltahir M, Persson H, Mangsbo S Expert Opin Biol Ther 20 (3) 215-217 2020-03-00 2020-01-10
The nf-core framework for community-curated bioinformatics pipelines. Ewels PA, Peltzer A, Fillinger S, ..., Di Tommaso P, Nahnsen S Nat. Biotechnol. 38 (3) 276-278 2020-03-00 2020-02-15
Synthesis, Evaluation and Proposed Binding Pose of Substituted Spiro-Oxindole Dihydroquinazolinones as IRAP Inhibitors. Engen K, Vanga SR, Lundbäck T, ..., Larhed M, Rosenström U ChemistryOpen 9 (3) 325-337 2020-03-00 2020-03-02
Structure of a minimal photosystem I from the green alga Dunaliella salina. Perez-Boerema A, Klaiman D, Caspy I, ..., Amunts A, Nelson N NPLANTS 6 (3) 321-327 2020-03-00 2020-03-02
PIRIN2 suppresses S-type lignin accumulation in a noncell-autonomous manner in Arabidopsis xylem elements. Zhang B, Sztojka B, Escamez S, ..., Boerjan W, Tuominen H New Phytol. 225 (5) 1923-1935 2020-03-00 2019-11-11
Overexpression of chromatin remodeling and tyrosine kinase genes in iAMP21-positive acute lymphoblastic leukemia. Ivanov Öfverholm I, Zachariadis V, Taylan F, ..., Nordlund J, Barbany G Leuk. Lymphoma 61 (3) 604-613 2020-03-00 2019-10-22
Longitudinal changes in the frequency of mosaic chromosome Y loss in peripheral blood cells of aging men varies profoundly between individuals. Danielsson M, Halvardson J, Davies H, ..., Dumanski JP, Forsberg LA Eur. J. Hum. Genet. 28 (3) 349-357 2020-03-00 2019-10-25
Irreversible TrxR1 inhibitors block STAT3 activity and induce cancer cell death. Busker S, Qian W, Haraldsson M, ..., Tamm KP, Page BDG Sci Adv 6 (12) eaax7945 2020-03-00 2020-03-20
In Situ Encapsulation of Nile Red or Doxorubicin during RAFT‐Mediated Emulsion Polymerization via Polymerization‐Induced Self‐Assembly for Biomedical Applications Engström J, Asem H, Brismar H, ..., Malkoch M, Malmström E Macromol. Chem. Phys. 221 (5) 1900443 2020-03-00 2020-02-10
Hyena paleogenomes reveal a complex evolutionary history of cross-continental gene flow between spotted and cave hyena. Westbury MV, Hartmann S, Barlow A, ..., Heller R, Hofreiter M Sci Adv 6 (11) eaay0456 2020-03-00 2020-03-13
High genetic risk score is associated with early disease onset, damage accrual and decreased survival in systemic lupus erythematosus. Reid S, Alexsson A, Frodlund M, ..., Rönnblom L, Leonard D Ann. Rheum. Dis. 79 (3) 363-369 2020-03-00 2019-12-11
Heritability of Caries Scores, Trajectories, and Disease Subtypes. Haworth S, Esberg A, Lif Holgerson P, ..., Franks PW, Johansson I J Dent Res 99 (3) 264-270 2020-03-00 2020-01-06
Functionally distinct subgroups of oligodendrocyte precursor cells integrate neural activity and execute myelin formation. Marisca R, Hoche T, Agirre E, ..., Castelo-Branco G, Czopka T Nat. Neurosci. 23 (3) 363-374 2020-03-00 2020-02-17
Evidence for widespread selection in shaping the genomic landscape during speciation of Populus. Wang J, Street NR, Park EJ, Liu J, Ingvarsson PK Mol. Ecol. 29 (6) 1120-1136 2020-03-00 2020-03-09
Distinct structural modulation of photosystem I and lipid environment stabilizes its tetrameric assembly. Chen M, Perez-Boerema A, Zhang L, ..., Li S, Amunts A NPLANTS 6 (3) 314-320 2020-03-00 2020-03-09
Discovery of Species-unique Peptide Biomarkers of Bacterial Pathogens by Tandem Mass Spectrometry-based Proteotyping. Karlsson R, Thorsell A, Gomila M, ..., Kristiansson E, Moore ERB Mol. Cell Proteomics 19 (3) 518-528 2020-03-00 2020-01-15
Chemical imaging of evolving amyloid plaque pathology and associated Aβ peptide aggregation in a transgenic mouse model of Alzheimer's disease. Michno W, Wehrli P, Meier SR, ..., Blennow K, Hanrieder J J. Neurochem. 152 (5) 602-616 2020-03-00 2019-11-06
Apolipoprotein E impairs amyloid-β fibril elongation and maturation. Islam T, Gharibyan AL, Golchin SA, ..., Olofsson L, Olofsson A FEBS J. 287 (6) 1208-1219 2020-03-00 2019-10-09
A link between the newly described colistin resistance gene mcr-9 and clinical Enterobacteriaceae isolates carrying blaSHV-12 from horses in Sweden. Börjesson S, Greko C, Myrenås M, ..., Nilsson O, Pedersen K J Glob Antimicrob Resist 20 (-) 285-289 2020-03-00 2019-09-05
PCSK6 Is a Key Protease in the Control of Smooth Muscle Cell Function in Vascular Remodeling. Rykaczewska U, Suur BE, Röhl S, ..., Hedin U, Matic L Circ. Res. 126 (5) 571-585 2020-02-28 2020-01-02
Complete genome and methylome analysis of Neisseria meningitidis associated with increased serogroup Y disease. Stenmark B, Harrison OB, Eriksson L, ..., Maiden MCJ, Mölling P Sci Rep 10 (1) 3644 2020-02-27 2020-02-27
The Relationship Between Polygenic Risk Scores and Cognition in Schizophrenia. Richards AL, Pardiñas AF, Frizzati A, ..., O'Donovan MC, Walters JTR Schizophr Bull 46 (2) 336-344 2020-02-26 2019-06-18
Streptococcus pneumoniae Nasopharyngeal Carriage among PCV-10-Vaccinated HIV-1-Infected Children with Maintained Serological Memory in Ethiopia. Lemma M, Bekele Y, Petkov S, ..., Howe R, Chiodi F Pathogens 9 (3) 159 2020-02-25 2020-02-25
Patterns of African and Asian admixture in the Afrikaner population of South Africa. Hollfelder N, Erasmus JC, Hammaren R, ..., Greeff JM, Schlebusch CM BMC Biol. 18 (1) 16 2020-02-24 2020-02-24
rs953413 Regulates Polyunsaturated Fatty Acid Metabolism by Modulating ELOVL2 Expression. Pan G, Cavalli M, Carlsson B, ..., Kumar C, Wadelius C iScience 23 (2) 100808 2020-02-21 2020-01-09
In Vitro Regeneration of Decellularized Pig Esophagus Using Human Amniotic Stem Cells. Nayakawde NB, Methe K, Banerjee D, ..., Premaratne GU, Olausson M Biores Open Access 9 (1) 22-36 2020-02-21 2020-02-21
Dominance of Mating Type A1 and Indication of Epigenetic Effects During Early Stages of Mating in Phytophthora infestans. Tzelepis G, Hodén KP, Fogelqvist J, ..., Vetukuri RR, Dixelius C Front Microbiol 11 (-) 252 2020-02-21 2020-02-21
Biomolecular analyses reveal the age, sex and species identity of a near-intact Pleistocene bird carcass. Dussex N, Stanton DWG, Sigeman H, ..., Hansson B, Dalén L Commun Biol 3 (1) 84 2020-02-21 2020-02-21
Backbone Cyclization and Dimerization of LL-37-Derived Peptides Enhance Antimicrobial Activity and Proteolytic Stability. Gunasekera S, Muhammad T, Strömstedt AA, Rosengren KJ, Göransson U Front Microbiol 11 (-) 168 2020-02-21 2020-02-21
Subtle structural alterations in G-quadruplex DNA regulate site specificity of fluorescence light-up probes. Kumar R, Chand K, Bhowmik S, ..., Hedenström M, Chorell E Nucleic Acids Res. 48 (3) 1108-1119 2020-02-20 2020-01-09
Primary cell wall inspired micro containers as a step towards a synthetic plant cell. Paulraj T, Wennmalm S, Wieland DCF, ..., Cárdenas M, Svagan AJ Nat Commun 11 (1) 958 2020-02-19 2020-02-19
Validation of Novel Prognostic Biomarkers for Early-Stage Clear-Cell, Endometrioid and Mucinous Ovarian Carcinomas Using Immunohistochemistry. Engqvist H, Parris TZ, Kovács A, ..., Karlsson P, Helou K Front Oncol 10 (-) 162 2020-02-18 2020-02-18
Managed and Unmanaged Pinus sylvestris Forest Stands Harbour Similar Diversity and Composition of the Phyllosphere and Soil Fungi. Lynikienė J, Marčiulynienė D, Marčiulynas A, ..., Vaičiukynė M, Menkis A Microorganisms 8 (2) 259 2020-02-15 2020-02-15
The First Structure of an Active Mammalian dCTPase and its Complexes With Substrate Analogs and Products. Scaletti E, Claesson M, Helleday T, Jemth AS, Stenmark P J. Mol. Biol. 432 (4) 1126-1142 2020-02-14 2020-01-15
Refined detection and phasing of structural aberrations in pediatric acute lymphoblastic leukemia by linked-read whole-genome sequencing. Nordlund J, Marincevic-Zuniga Y, Cavelier L, ..., Lönnerholm G, Syvänen AC Sci Rep 10 (1) 2512 2020-02-13 2020-02-13
Using null models to compare bacterial and microeukaryotic metacommunity assembly under shifting environmental conditions. Vass M, Székely AJ, Lindström ES, Langenheder S Sci Rep 10 (1) 2455 2020-02-12 2020-02-12
Quinazoline Ligands Induce Cancer Cell Death through Selective STAT3 Inhibition and G-Quadruplex Stabilization. Jamroskovic J, Doimo M, Chand K, ..., Chorell E, Sabouri N J. Am. Chem. Soc. 142 (6) 2876-2888 2020-02-12 2020-01-28
Subpopulations of extracellular vesicles from human metastatic melanoma tissue identified by quantitative proteomics after optimized isolation. Crescitelli R, Lässer C, Jang SC, ..., Olofsson Bagge R, Lötvall J J Extracell Vesicles 9 (1) 1722433 2020-02-11 2020-02-11
Longitudinal trajectories, correlations and mortality associations of nine biological ages across 20-years follow-up. Li X, Ploner A, Wang Y, ..., Jylhävä J, Hägg S Elife 9 (-) - 2020-02-11 2020-02-11
Whole genome sequencing unveils genetic heterogeneity in optic nerve hypoplasia. Dahl S, Pettersson M, Eisfeldt J, ..., Anderlid BM, Lindstrand A PLoS ONE 15 (2) e0228622 2020-02-10 2020-02-10
Low concentrations of the benzodiazepine drug oxazepam induce anxiolytic effects in wild-caught but not in laboratory zebrafish. Vossen LE, Červený D, Sen Sarma O, ..., Brodin T, Winberg S Sci. Total Environ. 703 (-) 134701 2020-02-10 2019-11-01
Clinicopathological features and prognostic value of SOX11 in childhood acute lymphoblastic leukemia. Grönroos T, Mäkinen A, Laukkanen S, ..., Heinäniemi M, Lohi O Sci Rep 10 (1) 2043 2020-02-06 2020-02-06
Clonal competition within complex evolutionary hierarchies shapes AML over time. Sandén C, Lilljebjörn H, Orsmark Pietras C, ..., Ågerstam H, Fioretos T Nat Commun 11 (1) 579 2020-02-05 2020-02-05
A chromosome-scale reference genome for Giardia intestinalis WB. Xu F, Jex A, Svärd SG Sci Data 7 (1) 38 2020-02-04 2020-02-04
Extensive dissemination and intraclonal maturation of HIV Env vaccine-induced B cell responses. Phad GE, Pushparaj P, Tran K, ..., Wyatt RT, Karlsson Hedestam GB J. Exp. Med. 217 (2) - 2020-02-03 2019-11-11
Plasma kidney injury molecule-1 (p-KIM-1) levels and deterioration of kidney function over 16 years. Schulz CA, Engström G, Nilsson J, ..., Melander O, Orho-Melander M Nephrol Dial Transplant 35 (2) 265-273 2020-02-01 2019-01-11
Glycogenin is Dispensable for Glycogen Synthesis in Human Muscle, and Glycogenin Deficiency Causes Polyglucosan Storage. Visuttijai K, Hedberg-Oldfors C, Thomsen C, ..., Roach P, Oldfors A J. Clin. Endocrinol. Metab. 105 (2) 557-566 2020-02-01 2019-10-20
Demography and Natural Selection Have Shaped Genetic Variation in the Widely Distributed Conifer Norway Spruce (Picea abies). Wang X, Bernhardsson C, Ingvarsson PK Genome Biol Evol 12 (2) 3803-3817 2020-02-01 2020-01-21
Convergent Evolution of Hydrogenosomes from Mitochondria by Gene Transfer and Loss. Lewis WH, Lind AE, Sendra KM, ..., Ettema TJG, Embley TM Mol. Biol. Evol. 37 (2) 524-539 2020-02-01 2019-10-28
The antimalarial drug amodiaquine stabilizes p53 through ribosome biogenesis stress, independently of its autophagy-inhibitory activity. Espinoza JA, Zisi A, Kanellis DC, ..., Lindström MS, Bartek J Cell Death Differ. 27 (2) 773-789 2020-02-00 2019-07-08
Revealing the Regional Localization and Differential Lung Retention of Inhaled Compounds by Mass Spectrometry Imaging. Hamm GR, Bäckström E, Brülls M, ..., Fridén M, Goodwin RJA J Aerosol Med Pulm Drug Deliv 33 (1) 43-53 2020-02-00 2019-07-31
Plasma Lipidome and Prediction of Type 2 Diabetes in the Population-Based Malmö Diet and Cancer Cohort. Fernandez C, Surma MA, Klose C, ..., Simons K, Melander O Diabetes Care 43 (2) 366-373 2020-02-00 2019-12-08
Perspective on CETSA Literature: Toward More Quantitative Data Interpretation. Seashore-Ludlow B, Axelsson H, Lundbäck T SLAS DISCOVERY: Advancing Life Sciences R&D 25 (2) 118-126 2020-02-00 2019-10-30
Genomic and transcriptomic features of dermatofibrosarcoma protuberans: Unusual chromosomal origin of the COL1A1-PDGFB fusion gene and synergistic effects of amplified regions in tumor development. Köster J, Arbajian E, Viklund B, ..., Mandahl N, Mertens F Cancer Genet 241 (-) 34-41 2020-02-00 2019-12-10
Fast time-resolved NMR with non-uniform sampling. Gołowicz D, Kasprzak P, Orekhov V, Kazimierczuk K Progress in Nuclear Magnetic Resonance Spectroscopy 116 (-) 40-55 2020-02-00 2019-09-25
Exosomes influence the behavior of human mesenchymal stem cells on titanium surfaces. Wang X, Shah FA, Vazirisani F, ..., Ekström K, Thomsen P Biomaterials 230 (-) 119571 2020-02-00 2019-10-24
Engineering yeast phospholipid metabolism for de novo oleoylethanolamide production. Liu Y, Liu Q, Krivoruchko A, Khoomrung S, Nielsen J Nat. Chem. Biol. 16 (2) 197-205 2020-02-00 2019-12-16
Dynamic architecture and regulatory implications of the miRNA network underlying the response to stress in melon. Sanz-Carbonell A, Marques MC, Martinez G, Gomez G RNA Biol 17 (2) 292-308 2020-02-00 2019-12-10
Associations Between Apolipoprotein A1, High-Density Lipoprotein Cholesterol, and Urinary Cytokine Levels in Elderly Males and Females. Fellström B, Helmersson-Karlqvist J, Lind L, ..., Ärnlöv J, Larsson A Journal of Interferon & Cytokine Research 40 (2) 71-74 2020-02-00 2019-10-10
Artificial intelligence for diagnosis and grading of prostate cancer in biopsies: a population-based, diagnostic study. Ström P, Kartasalo K, Olsson H, ..., Egevad L, Eklund M Lancet Oncol 21 (2) 222-232 2020-02-00 2020-01-08
Analysis of the genetic variants associated with circulating levels of sgp130. Results from the IMPROVE study. Bonomi A, Veglia F, Baldassarre D, ..., Gigante B, on behalf of the IMPROVE study group Genes Immun. 21 (2) 100-108 2020-02-00 2020-01-14
Painting of Fourth and the X-Linked 1.688 Satellite in D. melanogaster is Involved in Chromosome-Wide Gene Regulation. Ekhteraei-Tousi S, Lewerentz J, Larsson J Cells 9 (2) 323 2020-01-30 2020-01-30
Diversity and Host Interactions Among Virulent and Temperate Baltic Sea Flavobacterium Phages. Nilsson E, Bayfield OW, Lundin D, Antson AA, Holmfeldt K Viruses 12 (2) 158 2020-01-30 2020-01-30
Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants. Garcia M, Juhos S, Larsson M, ..., Käller M, Nystedt B F1000Res 9 (-) 63 2020-01-29 2020-01-29
The round goby genome provides insights into mechanisms that may facilitate biological invasions. Adrian-Kalchhauser I, Blomberg A, Larsson T, ..., Schloissnig S, Winkler S BMC Biol. 18 (1) 11 2020-01-28 2020-01-28
Building de novo reference genome assemblies of complex eukaryotic microorganisms from single nuclei. Montoliu-Nerin M, Sánchez-García M, Bergin C, ..., Johannesson H, Rosling A Sci Rep 10 (1) 1303 2020-01-28 2020-01-28
Population Pharmacokinetics and Pharmacogenetics of Ethambutol in Adult Patients Coinfected with Tuberculosis and HIV. Sundell J, Bienvenu E, Birgersson S, Äbelö A, Ashton M Antimicrob. Agents Chemother. 64 (2) - 2020-01-27 2020-01-27
Transcriptomic profiling of skeletal muscle adaptations to exercise and inactivity. Pillon NJ, Gabriel BM, Dollet L, ..., Krook A, Zierath JR Nat Commun 11 (1) 470 2020-01-24 2020-01-24
Extracellular Vesicles Released From the Skin Commensal Yeast Malassezia sympodialis Activate Human Primary Keratinocytes. Vallhov H, Johansson C, Veerman RE, Scheynius A Front. Cell. Infect. Microbiol. 10 (-) 6 2020-01-24 2020-01-24
Estimating Detection Limits of Potentiometric DNA Sensors Using Surface Plasmon Resonance Analyses. Xu X, Makaraviciute A, Abdurakhmanov E, ..., Nyholm L, Zhang Z ACS Sens. 5 (1) 217-224 2020-01-24 2019-12-23
CREBBP and WDR 24 Identified as Candidate Genes for Quantitative Variation in Red-Brown Plumage Colouration in the Chicken. Fogelholm J, Henriksen R, Höglund A, ..., Jensen P, Wright D Sci Rep 10 (1) 1161 2020-01-24 2020-01-24
The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly. Pinese M, Lacaze P, Rath EM, ..., Dinger ME, Thomas DM Nat Commun 11 (1) 435 2020-01-23 2020-01-23
Reverse engineering directed gene regulatory networks from transcriptomics and proteomics data of biomining bacterial communities with approximate Bayesian computation and steady-state signalling simulations. Buetti-Dinh A, Herold M, Christel S, ..., Friedman R, Dopson M BMC Bioinformatics 21 (1) 23 2020-01-21 2020-01-21
Modulation of Structural Heterogeneity Controls Phytochrome Photoswitching. Gustavsson E, Isaksson L, Persson C, ..., Orekhov V, Westenhoff S Biophysical Journal 118 (2) 415-421 2020-01-21 2019-11-26
Transcriptome analysis of fibroblasts from schizophrenia patients reveals differential expression of schizophrenia-related genes. Etemadikhah M, Niazi A, Wetterberg L, Feuk L Sci Rep 10 (1) 630 2020-01-20 2020-01-20
Loss of centromere function drives karyotype evolution in closely related Malassezia species. Sankaranarayanan SR, Ianiri G, Coelho MA, ..., Heitman J, Sanyal K Elife 9 (-) - 2020-01-20 2020-01-20
Genome-Based Comparison of All Species of the Genus Moorella, and Status of the Species Moorella thermoacetica and Moorella thermoautotrophica. Redl S, Poehlein A, Esser C, ..., Dürre P, Nielsen AT Front Microbiol 10 (-) 3070 2020-01-17 2020-01-17
A spontaneous mitonuclear epistasis converging on Rieske Fe-S protein exacerbates complex III deficiency in mice. Purhonen J, Grigorjev V, Ekiert R, ..., Fellman V, Kallijärvi J Nat Commun 11 (1) 322 2020-01-16 2020-01-16
Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus. Rugiu L, Panova M, Pereyra RT, Jormalainen V BMC Genomics 21 (1) 42 2020-01-13 2020-01-13
Development and characterization of an EMS-mutagenized wheat population and identification of salt-tolerant wheat lines. Lethin J, Shakil SSM, Hassan S, ..., Olsson O, Aronsson H BMC Plant Biol. 20 (1) 18 2020-01-13 2020-01-13
Screening for bioactive secondary metabolites in Sri Lankan medicinal plants by microfractionation and targeted isolation of antimicrobial flavonoids from Derris scandens. Mohotti S, Rajendran S, Muhammad T, ..., Hettiarachchi CM, Gunasekera S Journal of Ethnopharmacology 246 (-) 112158 2020-01-10 2019-08-14
A regulatory role for CHD2 in myelopoiesis. Shahin Varnoosfaderani F, Palau A, Dong W, ..., Svensson JP, Lennartsson A Epigenetics 15 (6-7) 702-714 2020-01-10 2020-01-10
Genome-wide association and Mendelian randomisation analysis provide insights into the pathogenesis of heart failure. Shah S, Henry A, Roselli C, ..., Swerdlow DI, Lumbers RT Nat Commun 11 (1) 163 2020-01-09 2020-01-09
DNA methylation changes in Down syndrome derived neural iPSCs uncover co-dysregulation of ZNF and HOX3 families of transcription factors. Laan L, Klar J, Sobol M, ..., Schuster J, Dahl N Clin Epigenetics 12 (1) 9 2020-01-08 2020-01-08
A Light-up Logic Platform for Selective Recognition of Parallel G-Quadruplex Structures via Disaggregation-Induced Emission. Deiana M, Chand K, Jamroskovic J, ..., Chorell E, Sabouri N Angew. Chem. Int. Ed. Engl. 59 (2) 896-902 2020-01-07 2019-11-22
Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet. Gelabert P, Sandoval-Velasco M, Serres A, ..., Gilbert MTP, Lalueza-Fox C Curr. Biol. 30 (1) 108-114.e5 2020-01-06 2019-12-12
Metabolic Profiling and Compound-Class Identification Reveal Alterations in Serum Triglyceride Levels in Mice Immunized with Human Vaccine Adjuvant Alum. Khoomrung S, Nookaew I, Sen P, ..., Harandi AM, Nielsen J J. Proteome Res. 19 (1) 269-278 2020-01-03 2019-11-01
Integrative discovery of treatments for high-risk neuroblastoma. Almstedt E, Elgendy R, Hekmati N, ..., Krona C, Nelander S Nat Commun 11 (1) 71 2020-01-03 2020-01-03
The Mitogenome of Norway Spruce and a Reappraisal of Mitochondrial Recombination in Plants. Sullivan AR, Eldfjell Y, Schiffthaler B, ..., Street NR, Wang XR Genome Biol Evol 12 (1) 3586-3598 2020-01-01 2019-11-28
The Genome of the Endangered Dryas Monkey Provides New Insights into the Evolutionary History of the Vervets. van der Valk T, Gonda CM, Silegowa H, ..., Detwiler KM, Guschanski K Mol. Biol. Evol. 37 (1) 183-194 2020-01-01 2019-09-19
Hepatitis E virus genotype 3 strains and a plethora of other viruses detected in raw and still in tap water. Wang H, Kjellberg I, Sikora P, ..., Bergstedt O, Norder H Water Res. 168 (-) 115141 2020-01-01 2019-09-30
Discovery of Novel Sequences in 1,000 Swedish Genomes. Eisfeldt J, Mårtensson G, Ameur A, Nilsson D, Lindstrand A Mol. Biol. Evol. 37 (1) 18-30 2020-01-01 2019-09-29
A dual-action peptide-containing hydrogel targets wound infection and inflammation. Puthia M, Butrym M, Petrlova J, ..., Kjellström S, Schmidtchen A Sci Transl Med 12 (524) eaax6601 2020-01-01 2020-01-03
Whole genome sequencing of apparently mutation-negative MEN1 patients. Backman S, Bajic D, Crona J, ..., Skogseid B, Stålberg P Eur. J. Endocrinol. 182 (1) 35-45 2020-01-00 2019-10-29
Variable neurodevelopmental and morphological phenotypes of carriers with 12q12 duplications. Myers L, Blyth M, Moradkhani K, ..., Anderlid BM, Tammimies K Mol Genet Genomic Med 8 (1) e1013 2020-01-00 2019-11-15
The Proteome of the Dentate Terminal Zone of the Perforant Path Indicates Presynaptic Impairment in Alzheimer Disease. Haytural H, Mermelekas G, Emre C, ..., Tjernberg LO, Frykman S Mol. Cell Proteomics 19 (1) 128-141 2020-01-00 2019-11-07
Regulation of α-synuclein by chaperones in mammalian cells. Burmann BM, Gerez JA, Matečko-Burmann I, ..., Riek R, Hiller S Nature 577 (7788) 127-132 2020-01-00 2019-12-04
Protein and DNA methylation-based scores as surrogate markers for interferon system activation in patients with primary Sjögren's syndrome. Björk A, Richardsdotter Andersson E, Imgenberg-Kreuz J, ..., Nordmark G, Wahren-Herlenius M RMD Open 6 (1) e000995 2020-01-00 2020-01-21
Probabilistic cell typing enables fine mapping of closely related cell types in situ. Qian X, Harris KD, Hauling T, ..., Hjerling-Leffler J, Nilsson M Nat. Methods 17 (1) 101-106 2020-01-00 2019-11-18
NMR Spectroscopic Analysis to Evaluate the Quality of Insulin: Concentration, Variability, and Excipient Content. Malmodin D, Pedersen A, Karlsson BG, Forsander G J Diabetes Sci Technol 14 (1) 180-184 2020-01-00 2019-02-19
NIST Interlaboratory Study on Glycosylation Analysis of Monoclonal Antibodies: Comparison of Results from Diverse Analytical Methods. De Leoz MLA, Duewer DL, Fung A, ..., Yuan H, Stein SE Mol. Cell Proteomics 19 (1) 11-30 2020-01-00 2019-10-07
Molecular mechanisms of collateral sensitivity to the antibiotic nitrofurantoin. Roemhild R, Linkevicius M, Andersson DI PLoS Biol. 18 (1) e3000612 2020-01-00 2020-01-27
Metabolic response patterns in brain microdialysis fluids and serum during interstitial cisplatin treatment of high-grade glioma. Björkblom B, Jonsson P, Tabatabaei P, ..., Bergenheim AT, Antti H Br. J. Cancer 122 (2) 221-232 2020-01-00 2019-12-10
Identification of novel diagnostic and prognostic biomarkers for abdominal aortic aneurysm. Memon AA, Zarrouk M, Ågren-Witteschus S, ..., Gottsäter A, Sundquist K Eur J Prev Cardiol 27 (2) 132-142 2020-01-00 2019-08-29
IDDomainSpotter: Compositional bias reveals domains in long disordered protein regions-Insights from transcription factors. Millard PS, Bugge K, Marabini R, ..., Burow M, Kragelund BB Protein Sci. 29 (1) 169-183 2020-01-00 2019-11-11
Genotypic variation in Norway spruce correlates to fungal communities in vegetative buds. Elfstrand M, Zhou L, Baison J, ..., Stenlid J, García-Gil MR Mol. Ecol. 29 (1) 199-213 2020-01-00 2019-12-09
Genome-wide signatures of environmental adaptation in European aspen (Populus tremula) under current and future climate conditions. Ingvarsson PK, Bernhardsson C Evol Appl 13 (1) 132-142 2020-01-00 2019-04-02
Do we really know who has an MGMT methylated glioma? Results of an international survey regarding use of MGMT analyses for glioma. Malmström A, Łysiak M, Kristensen BW, ..., Henriksson R, Söderkvist P Neurooncol Pract 7 (1) 68-76 2020-01-00 2019-09-24
Developmental exposure to a human relevant mixture of endocrine disruptors alters metabolism and adipogenesis in zebrafish (Danio rerio). Mentor A, Brunström B, Mattsson A, Jönsson M Chemosphere 238 (-) 124584 2020-01-00 2019-08-13
Circadian regulation of phosphodiesterase 6 genes in zebrafish differs between cones and rods: Implications for photopic and scotopic vision. Abalo XM, Lagman D, Heras G, ..., Eggert J, Larhammar D Vision Res. 166 (-) 43-51 2020-01-00 2019-12-16
Cell-of-origin determined by both gene expression profiling and immunohistochemistry is the strongest predictor of survival in patients with diffuse large B-cell lymphoma. Abdulla M, Hollander P, Pandzic T, ..., Rosenquist R, Amini RM Am. J. Hematol. 95 (1) 57-67 2020-01-00 2019-11-07
Association of genetic variants related to plasma fatty acids with type 2 diabetes mellitus and glycaemic traits: a Mendelian randomisation study. Yuan S, Larsson SC Diabetologia 63 (1) 116-123 2020-01-00 2019-11-05
Regeneration of water-deactivated Cu/SAPO-34(MO) with acids Woo J, Bernin D, Ahari H, ..., Zammit M, Olsson L Catal. Sci. Technol. 10 (5) 1539-1550 2020-00-00 2020-00-00
In Situ Sequencing: A High-Throughput, Multi-Targeted Gene Expression Profiling Technique for Cell Typing in Tissue Sections Hilscher MM, Gyllborg D, Yokota C, Nilsson M Methods Mol. Biol. 2148 (-) 313-329 2020-00-00 2020-05-12
An integrative toolbox to unlock the structure and dynamics of protein–surfactant complexes Sanchez-Fernandez A, Diehl C, Houston JE, ..., Sjögren H, Wahlgren M Nanoscale Adv. 2 (9) 4011-4023 2020-00-00 2020-00-00
A Chemical Screen Identifies a Link between Lipid Metabolism and mRNA Translation Corman A, Kanellis DC, Häggblad M, ..., Carreras-Puigvert J, Fernandez-Capetillo O SSRN Journal - (-) - 2020-00-00 2020-00-00

Publications 9.5.0