Sjödin A

Nationwide multicentre study of Nanopore long-read sequencing for 16S rRNA-species identification.

Brunet S, Grankvist A, Jaen-Luchoro D, ..., Mölling P, Hallbäck ET

Eur. J. Clin. Microbiol. Infect. Dis. 44 (8) 1907-1916 [2025-08-00; online 2025-05-10]

Clinical Genomics [Service] Clinical Genomics Gothenburg [Service] NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]

Completed genome and emergence scenario of the multidrug-resistant nosocomial pathogen Staphylococcus epidermidis ST215.

Kellgren T, Dwibedi C, Widerström M, ..., Rydén P, Johansson A

BMC Microbiol. 24 (1) 215 [2024-06-19; online 2024-06-19]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Targeting the gut-lung axis by synbiotic feeding to infants in a randomized controlled trial.

Sjödin KS, Sjödin A, Ruszczyński M, ..., Szajewska H, West CE

BMC Biol. 21 (1) 38 [2023-02-20; online 2023-02-20]

NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service] Swedish Metabolomics Centre [Service]

Co-Occurrence of Francisella, Spotted Fever Group Rickettsia, and Midichloria in Avian-Associated Hyalomma rufipes

Hoffman T, Sjödin A, Öhrman C, ..., Lundkvist Å, Olsen B

Microorganisms 10 (7) 1393 [2022-07-11; online 2022-07-11]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

A whole-genome sequenced control population in northern Sweden reveals subregional genetic differences.

Svensson D, Rentoft M, Dahlin AM, ..., Trygg J, Johansson E

PLoS ONE 15 (9) e0237721 [2020-09-11; online 2020-09-11]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Complete Genome Sequence of Francisella halioticida Type Strain DSM 23729 (FSC1005).

Uneklint I, Öhrman C, Karlsson L, ..., Forsman M, Sjödin A

Microbiol Resour Announc 9 (37) - [2020-09-10; online 2020-09-10]

NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]