F1000Res

ISSN	2046-1402
ISSN-L	2046-1402
IUID	c7eaedee44bf44398d6d28fee69c0d7f
Modified	2020-11-27T13:14:08.817Z
Created	2017-10-04T15:14:48.626Z

Year 2022

DOI Crossref

Systems Biology in ELIXIR: modelling in the spotlight

Martins dos Santos V, Anton M, Szomolay B, ..., Evelo CT, Hancock JM

F1000Res 11 (-) 1265 [2022-11-07; online 2022-11-07]

Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

Year 2021

DOI Crossref

Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR

Waterhouse RM, Adam-Blondon AF, Agosti D, ..., Willassen NP, Lanfear J

F1000Res 10 (-) 1238 [2021-12-03; online 2021-12-03]

Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

Highlights from the 2016-2020 NEUBIAS training schools for Bioimage Analysts: a success story and key asset for analysts and life scientists.

Martins GG, Cordelières FP, Colombelli J, ..., Tinevez JY, Miura K

F1000Res 10 (-) 334 [2021-04-30; online 2021-04-30]

BioImage Informatics [Collaborative]

PubMed DOI Crossref

Bioimage analysis workflows: community resources to navigate through a complex ecosystem.

Paul-Gilloteaux P, Tosi S, Hériché JK, ..., Miura K, Colombelli J

F1000Res 10 (-) 320 [2021-04-26; online 2021-04-26]

BioImage Informatics [Collaborative]

DOI Crossref

CytoBrowser: a browser-based collaborative annotation platform for whole slide images

Rydell C, Lindblad J

F1000Res 10 (-) 226 [2021-03-22; online 2021-03-22]

AIDA Data Hub [Service]

Year 2020

DOI Crossref

Chanjo: Clincal grade sequence coverage analysis

Andeer R, Magnusson M, Wedell A, Stranneheim H

F1000Res 9 (-) 615 [2020-06-16; online 2020-06-16]

Clinical Genomics Stockholm [Technology development]

PubMed DOI Crossref

Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants.

Garcia M, Juhos S, Larsson M, ..., Käller M, Nystedt B

F1000Res 9 (-) 63 [2020-01-29; online 2020-01-29]

Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Technology development] Bioinformatics Support and Infrastructure [Technology development] Bioinformatics Support, Infrastructure and Training [Technology development] Clinical Genomics Stockholm [Collaborative] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Year 2018

PubMed DOI Crossref

Ten steps to get started in Genome Assembly and Annotation

Dominguez Del Angel V, Hjerde E, Sterck L, ..., Binzer-Panchal M, Lantz H

F1000Res 7 (-) 148 [2018-02-05; online 2018-02-05]

Bioinformatics Compute and Storage [Service] Bioinformatics Support and Infrastructure [Technology development] Bioinformatics Support, Infrastructure and Training [Technology development] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]

Year 2017

PubMed DOI Crossref

Four simple recommendations to encourage best practices in research software

Jiménez RC, Kuzak M, Alhamdoosh M, ..., Watson-Haigh NS, Crouch S

F1000Res 6 (-) 876 [2017-06-13; online 2017-06-13]

Bioinformatics Support and Infrastructure [Technology development] Bioinformatics Support, Infrastructure and Training [Technology development]

PubMed DOI Crossref

A community proposal to integrate proteomics activities in ELIXIR

Vizcaíno JA, Walzer M, Jiménez RC, ..., Martens L, Kohlbacher O

F1000Res 6 (-) 875 [2017-06-13; online 2017-06-13]

Bioinformatics Support and Infrastructure [Technology development] Bioinformatics Support, Infrastructure and Training [Technology development]

PubMed DOI Crossref

TIDDIT, an efficient and comprehensive structural variant caller for massive parallel sequencing data.

Eisfeldt J, Vezzi F, Olason P, Nilsson D, Lindstrand A

F1000Res 6 (-) 664 [2017-05-10; online 2017-05-10]

Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Clinical Genomics Stockholm [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Year 2016

PubMed DOI Crossref

Cluster Flow: A user-friendly bioinformatics workflow tool.

Ewels P, Krueger F, Käller M, Andrews S

F1000Res 5 (-) 2824 [2016-12-06; online 2016-12-06]

NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Collaborative] National Genomics Infrastructure [Collaborative]