Mol. Biol. Evol.

ISSN	1537-1719
ISSN-L	0737-4038
IUID	5a99c60fb6c44cab8f97da70d2e3a69d
Modified	2020-11-27T13:14:04.942Z
Created	2017-05-09T09:12:28.261Z

Year 2023

PubMed DOI Crossref

Complex Evolutionary History With Extensive Ancestral Gene Flow in an African Primate Radiation.

Jensen A, Swift F, de Vries D, ..., Roos C, Guschanski K

Mol. Biol. Evol. 40 (12) - [2023-12-01; online 2023-11-21]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Low mutation load in a supergene underpinning alternative male mating strategies in ruff (Calidris pugnax).

Hill J, Enbody ED, Bi H, ..., Widemo F, Andersson L

Mol. Biol. Evol. 40 (12) msad224 [2023-10-06; online 2023-10-06]

Bioinformatics Support for Computational Resources [Service] NGI Long read [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles.

Kaufmann P, Wiberg RAW, Papachristos K, ..., Tellgren-Roth C, Immonen E

Mol. Biol. Evol. 40 (8) - [2023-08-03; online 2023-07-22]

Bioinformatics Support for Computational Resources [Service] NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]

PubMed DOI Crossref

SAG-RAD: A Method for Single-Cell Population Genomics of Unicellular Eukaryotes.

Gollnisch R, Wallenius J, Gribble KE, Ahrén D, Rengefors K

Mol. Biol. Evol. 40 (5) - [2023-05-02; online 2023-04-20]

Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Micro Germline-Restricted Chromosome in Blue Tits: Evidence for Meiotic Functions.

Mueller JC, Schlebusch SA, Pei Y, ..., Suh A, Kempenaers B

Mol. Biol. Evol. 40 (5) - [2023-05-02; online 2023-04-28]

Bioinformatics Support for Computational Resources [Service] NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

A Phylogenomic Assessment of Processes Underpinning Convergent Evolution in Open-Habitat Chats.

Alaei Kakhki N, Schweizer M, Lutgen D, ..., Schielzeth H, Burri R

Mol. Biol. Evol. 40 (1) - [2023-01-04; online 2022-12-30]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Year 2022

PubMed DOI Crossref

Blue Turns to Gray: Paleogenomic Insights into the Evolutionary History and Extinction of the Blue Antelope (Hippotragus leucophaeus).

Hempel E, Bibi F, Faith JT, ..., Hofreiter M, Westbury MV

Mol. Biol. Evol. 39 (12) - [2022-12-05; online 2022-11-03]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

The Dynamics of Adaptation to Stress from Standing Genetic Variation and de novo Mutations.

Ament-Velásquez SL, Gilchrist C, Rêgo A, ..., Rafati N, Stelkens R

Mol. Biol. Evol. 39 (11) - [2022-11-03; online 2022-11-06]

Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genomic Impact of Whaling in North Atlantic Fin Whales.

Wolf M, de Jong M, Halldórsson SD, Árnason Ú, Janke A

Mol. Biol. Evol. 39 (5) - [2022-05-03; online 2022-05-06]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genomic Signatures of Sexual Selection on Pollen-Expressed Genes in Arabis alpina.

Gutiérrez-Valencia J, Fracassetti M, Horvath R, ..., Kolář F, Slotte T

Mol. Biol. Evol. 39 (1) - [2022-01-07; online 2021-12-09]

Bioinformatics Long-term Support WABI [Service] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Year 2021

PubMed DOI Crossref

Adaptive Introgression Facilitates Adaptation to High Latitudes in European Aspen (Populus tremula L.).

Rendón-Anaya M, Wilson J, Sveinsson S, ..., Street NR, Ingvarsson PK

Mol. Biol. Evol. 38 (11) 5034-5050 [2021-10-27; online 2021-07-31]

Bioinformatics Support for Computational Resources [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Avian neo-sex chromosomes reveal dynamics of recombination suppression and W degeneration.

Sigeman H, Strandh M, Proux-Wéra E, ..., Westerdahl H, Hansson B

Mol. Biol. Evol. 38 (12) 5275-5291 [2021-09-20; online 2021-09-20]

Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]

PubMed DOI Crossref

Selection on accessible chromatin regions in Capsella grandiflora.

Horvath R, Josephs EB, Pesquet E, ..., Scofield D, Slotte T

Mol. Biol. Evol. - (-) - [2021-09-08; online 2021-09-08]

Bioinformatics Support for Computational Resources [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Ecological Specialization and Evolutionary Reticulation in Extant Hyaenidae.

Westbury MV, Le Duc D, Duchêne DA, ..., Schöneberg T, Hofreiter M

Mol. Biol. Evol. 38 (9) 3884-3897 [2021-08-23; online 2021-08-25]

NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genetic Barriers to Historical Gene Flow between Cryptic Species of Alpine Bumblebees Revealed by Comparative Population Genomics.

Christmas MJ, Jones JC, Olsson A, ..., Geib JC, Webster MT

Mol. Biol. Evol. 38 (8) 3126-3143 [2021-07-29; online 2021-04-07]

Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure

PubMed DOI Crossref

Size Variation of the Nonrecombining Region on the Mating-Type Chromosomes in the Fungal Podospora anserina Species Complex.

Hartmann FE, Ament-Velásquez SL, Vogan AA, ..., Silar P, Giraud T

Mol. Biol. Evol. 38 (6) 2475-2492 [2021-05-19; online 2021-02-09]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

How to Make a Rodent Giant: Genomic Basis and Tradeoffs of Gigantism in the Capybara, the World's Largest Rodent.

Herrera-Álvarez S, Karlsson E, Ryder OA, Lindblad-Toh K, Crawford AJ

Mol. Biol. Evol. 38 (5) 1715-1730 [2021-05-04; online 2020-11-11]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Divergence and Remarkable Diversity of the Y Chromosome in Guppies.

Almeida P, Sandkam BA, Morris J, ..., Breden F, Mank JE

Mol. Biol. Evol. 38 (2) 619-633 [2021-01-23; online 2020-10-07]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Embryo-Like Features in Developing Bacillus subtilis Biofilms.

Futo M, Opašić L, Koska S, ..., Mijakovic I, Domazet-Lošo T

Mol. Biol. Evol. 38 (1) 31-47 [2021-01-04; online 2020-09-02]

Glycoproteomics and MS Proteomics [Service]

Year 2020

PubMed DOI Crossref

Interspecific Gene Flow and the Evolution of Specialization in Black and White Rhinoceros.

Moodley Y, Westbury MV, Russo IM, ..., Dalén L, Bruford MW

Mol. Biol. Evol. 37 (11) 3105-3117 [2020-11-01; online 2020-06-26]

NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Collaborative] National Genomics Infrastructure [Collaborative]

PubMed DOI Crossref

Khoe-San Genomes Reveal Unique Variation and Confirm the Deepest Population Divergence in Homo sapiens.

Schlebusch CM, Sjödin P, Breton G, ..., Soodyall H, Jakobsson M

Mol. Biol. Evol. 37 (10) 2944-2954 [2020-10-01; online 2020-07-23]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Mutations Upstream of the TBX5 and PITX1 Transcription Factor Genes Are Associated with Feathered Legs in the Domestic Chicken.

Li J, Lee M, Davis BW, ..., Siegel PB, Andersson L

Mol. Biol. Evol. 37 (9) 2477-2486 [2020-09-01; online 2020-04-29]

NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Evolutionary Analysis of the Bacillus subtilis Genome Reveals New Genes Involved in Sporulation.

Shi L, Derouiche A, Pandit S, ..., Vlahoviček K, Mijakovic I

Mol. Biol. Evol. 37 (6) 1667-1678 [2020-06-01; online 2020-02-16]

Integrated Microscopy Technologies Gothenburg [Service]

PubMed DOI Crossref

Evolution of a New Function by Fusion between Phage DNA and a Bacterial Gene.

Warsi O, Knopp M, Surkov S, Jerlström Hultqvist J, Andersson DI

Mol. Biol. Evol. 37 (5) 1329-1341 [2020-05-01; online 2020-01-25]

Glycoproteomics and MS Proteomics [Service]

PubMed DOI Crossref

Paralogization and New Protein Architectures in Planctomycetes Bacteria with Complex Cell Structures.

Mahajan M, Yee B, Hägglund E, ..., Fuerst JA, Andersson SGE

Mol. Biol. Evol. 37 (4) 1020-1040 [2020-04-01; online 2019-12-07]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Convergent Evolution of Hydrogenosomes from Mitochondria by Gene Transfer and Loss.

Lewis WH, Lind AE, Sendra KM, ..., Ettema TJG, Embley TM

Mol. Biol. Evol. 37 (2) 524-539 [2020-02-01; online 2019-10-28]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Discovery of Novel Sequences in 1,000 Swedish Genomes.

Eisfeldt J, Mårtensson G, Ameur A, Nilsson D, Lindstrand A

Mol. Biol. Evol. 37 (1) 18-30 [2020-01-01; online 2019-09-29]

Bioinformatics Support for Computational Resources [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]

PubMed DOI Crossref

The Genome of the Endangered Dryas Monkey Provides New Insights into the Evolutionary History of the Vervets.

van der Valk T, Gonda CM, Silegowa H, ..., Detwiler KM, Guschanski K

Mol. Biol. Evol. 37 (1) 183-194 [2020-01-01; online 2019-09-19]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Year 2019

PubMed DOI Crossref

Along the Indian Ocean coast: genomic variation in Mozambique provides new insights into the Bantu expansion.

Semo A, Gayà-Vidal M, Fortes-Lima C, ..., Schlebusch C, Rocha J

Mol. Biol. Evol. - (-) - [2019-10-08; online 2019-10-08]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Skeletal Mineralization in Association with Type X Collagen Expression Is an Ancestral Feature for Jawed Vertebrates.

Debiais-Thibaud M, Simion P, Ventéo S, ..., Mazan S, Haitina T

Mol. Biol. Evol. 36 (10) 2265-2276 [2019-10-01; online 2019-07-05]

Bioinformatics Support for Computational Resources [Service] Genome Engineering Zebrafish [Service]

PubMed DOI Crossref

Extreme Differences in Recombination Rate between the Genomes of a Solitary and a Social Bee.

Jones JC, Wallberg A, Christmas MJ, Kapheim KM, Webster MT

Mol. Biol. Evol. 36 (10) 2277-2291 [2019-10-01; online 2019-05-31]

NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Ancestral Admixture Is the Main Determinant of Global Biodiversity in Fission Yeast.

Tusso S, Nieuwenhuis BPS, Sedlazeck FJ, ..., Jeffares DC, Wolf JBW

Mol. Biol. Evol. 36 (9) 1975-1989 [2019-09-01; online 2019-06-22]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genetic Affinities among Southern Africa Hunter-Gatherers and the Impact of Admixing Farmer and Herder Populations.

Vicente M, Jakobsson M, Ebbesen P, Schlebusch CM

Mol. Biol. Evol. 36 (9) 1849-1861 [2019-09-01; online 2019-07-10]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Year 2018

PubMed DOI Crossref

Extended and Continuous Decline in Effective Population Size Results in Low Genomic Diversity in the World's Rarest Hyena Species, the Brown Hyena.

Westbury MV, Hartmann S, Barlow A, ..., Dalén L, Hofreiter M

Mol. Biol. Evol. 35 (5) 1225-1237 [2018-05-01; online 2018-03-13]

NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Year 2017

PubMed DOI Crossref

Interspecific Plastome Recombination Reflects Ancient Reticulate Evolution in Picea (Pinaceae).

Sullivan AR, Schiffthaler B, Thompson SL, Street NR, Wang XR

Mol. Biol. Evol. 34 (7) 1689-1701 [2017-07-01; online 2017-04-07]

Bioinformatics Support for Computational Resources [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Year 2016

PubMed DOI Crossref

Evolutionary History of the Nesophontidae, the Last Unplaced Recent Mammal Family.

Brace S, Thomas JA, Dalén L, ..., Barnes I, Turvey ST

Mol. Biol. Evol. 33 (12) 3095-3103 [2016-12-00; online 2016-09-15]

NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Variation in Linked Selection and Recombination Drive Genomic Divergence during Allopatric Speciation of European and American Aspens.

Wang J, Street NR, Scofield DG, Ingvarsson PK

Mol. Biol. Evol. 33 (7) 1754-1767 [2016-07-00; online 2016-03-18]

Bioinformatics Support for Computational Resources [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Year 2015

PubMed DOI Crossref

Amelioration of the Fitness Costs of Antibiotic Resistance Due To Reduced Outer Membrane Permeability by Upregulation of Alternative Porins.

Knopp M, Andersson DI

Mol. Biol. Evol. 32 (12) 3252-3263 [2015-12-00; online 2015-09-12]

Mass Spectrometry-based Proteomics, Uppsala

PubMed DOI Crossref

Quantitative Mass Spectrometry Reveals Partial Translational Regulation for Dosage Compensation in Chicken.

Uebbing S, Konzer A, Xu L, ..., Bergquist J, Ellegren H

Mol. Biol. Evol. 32 (10) 2716-2725 [2015-10-00; online 2015-06-26]

NGI Uppsala (SNP&SEQ Technology Platform) National Genomics Infrastructure

PubMed DOI Crossref

Cis-Regulatory Changes Associated with a Recent Mating System Shift and Floral Adaptation in Capsella.

Steige KA, Reimegård J, Koenig D, Scofield DG, Slotte T

Mol. Biol. Evol. 32 (10) 2501-2514 [2015-10-00; online 2015-08-28]

Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Inbreeding Affects Gene Expression Differently in Two Self-Incompatible Arabidopsis lyrata Populations with Similar Levels of Inbreeding Depression.

Menzel M, Sletvold N, Ågren J, Hansson B

Mol. Biol. Evol. 32 (8) 2036-2047 [2015-08-00; online 2015-04-10]

Bioinformatics Support and Infrastructure Bioinformatics Support, Infrastructure and Training

PubMed DOI Crossref

Human adaptation to arsenic-rich environments.

Schlebusch CM, Gattepaille LM, Engström K, ..., Jakobsson M, Broberg K

Mol. Biol. Evol. 32 (6) 1544-1555 [2015-06-00; online 2015-03-03]

NGI Uppsala (SNP&SEQ Technology Platform) National Genomics Infrastructure

Year 2014

PubMed DOI Crossref

Old but not (so) degenerated--slow evolution of largely homomorphic sex chromosomes in ratites.

Yazdi HP, Ellegren H

Mol. Biol. Evol. 31 (6) 1444-1453 [2014-06-00; online 2014-03-13]

NGI Uppsala (SNP&SEQ Technology Platform) National Genomics Infrastructure

PubMed DOI Crossref

Why time matters: codon evolution and the temporal dynamics of dN/dS.

Mugal CF, Wolf JB, Kaj I

Mol. Biol. Evol. 31 (1) 212-231 [2014-01-00; online 2013-10-17]

NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) National Genomics Infrastructure

Year 2013

PubMed DOI Crossref

Protein expansion is primarily due to indels in intrinsically disordered regions.

Light S, Sagit R, Sachenkova O, Ekman D, Elofsson A

Mol. Biol. Evol. 30 (12) 2645-2653 [2013-12-00; online 2013-09-17]

Bioinformatics Support and Infrastructure Bioinformatics Support, Infrastructure and Training

PubMed DOI Crossref

Lack of dosage compensation accompanies the arrested stage of sex chromosome evolution in ostriches.

Adolfsson S, Ellegren H

Mol. Biol. Evol. 30 (4) 806-810 [2013-04-00; online 2013-01-19]

NGI Uppsala (SNP&SEQ Technology Platform) National Genomics Infrastructure

Year 2010

PubMed DOI Crossref

Ontogenetic complexity of sexual dimorphism and sex-specific selection.

Mank JE, Nam K, Brunström B, Ellegren H

Mol. Biol. Evol. 27 (7) 1570-1578 [2010-07-00; online 2010-02-10]

Array and Analysis Facility