Clinical Genomics Umeå (13 publications)

SciLifeLab Infrastructure Unit Since 2019.

Primary: Shown in the list of current labels, if end date is not specified.

Started: 2019

Ended: Current

Year 2022

Plasma concentrations of gut hormones acyl ghrelin and Peptide YY and subsequent risk of colorectal cancer and molecular tumor subtypes.

Bodén S, Harbs J, Sundkvist A, ..., Harlid S, Van Guelpen B

Cancer Prev Res (Phila) - (-) - [2022-11-11; online 2022-11-11]

Clinical Genomics Umeå [Service]

PubMed DOI Crossref

Parvimonas micra is associated with tumour immune profiles in molecular subtypes of colorectal cancer.

Löwenmark T, Li X, Löfgren-Burström A, ..., Edin S, Palmqvist R

Cancer Immunol. Immunother. 71 (10) 2565-2575 [2022-10-00; online 2022-03-17]

Affinity Proteomics Uppsala [Service] Clinical Genomics Umeå [Service]

PubMed DOI Crossref

Implementing precision medicine in a regionally organized healthcare system in Sweden

Fioretos T, Wirta V, Cavelier L, ..., Edsjö A, Rosenquist R

Nat Med 28 (10) 1980-1982 [2022-10-00; online 2022-09-19]

Clinical Genomics Gothenburg [Collaborative] Clinical Genomics Linköping [Service] Clinical Genomics Umeå [Service] Clinical Genomics Uppsala [Collaborative]

PubMed DOI Crossref

To Modify or Not to Modify: Allele-Specific Effects of 3'UTR-KCNQ1 Single Nucleotide Polymorphisms on Clinical Phenotype in a Long QT 1 Founder Population Segregating a Dominant-Negative Mutation.

Winbo A, Diamant UB, Persson J, Jensen SM, Rydberg A

J Am Heart Assoc 11 (18) e025981 [2022-09-20; online 2022-09-14]

Clinical Genomics Umeå [Service]

PubMed DOI Crossref

TCF4 trinucleotide repeat expansion in Swedish cases with Fuchs' endothelial corneal dystrophy.

Viberg A, Westin IM, Golovleva I, Byström B

Acta Ophthalmol 100 (5) 541-548 [2022-08-00; online 2021-10-13]

Clinical Genomics Umeå [Service]

PubMed DOI Crossref

Long-Term Follow-Up of Newborns with 22q11 Deletion Syndrome and Low TRECs

Framme JL, Lundqvist C, Lundell AC, ..., Oskarsdóttir S, Ekwall O

J Clin Immunol 42 (3) 618-633 [2022-04-00; online 2022-01-26]

Clinical Genomics Umeå [Service]

PubMed DOI Crossref

A Study Protocol for Validation and Implementation of Whole-Genome and -Transcriptome Sequencing as a Comprehensive Precision Diagnostic Test in Acute Leukemias.

Berglund E, Barbany G, Orsmark-Pietras C, ..., Fioretos T, Rosenquist R

Front Med (Lausanne) 9 (-) 842507 [2022-03-24; online 2022-03-24]

Clinical Genomics Gothenburg [Collaborative] Clinical Genomics Umeå [Service] Clinical Genomics Uppsala [Collaborative]

PubMed DOI Crossref

Clinical and biological relevance of the transcriptomic-based prostate cancer metastasis subtypes MetA-C.

Thysell E, Köhn L, Semenas J, ..., Bergh A, Wikström P

Mol Oncol 16 (4) 846-859 [2022-02-00; online 2021-12-27]

Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Clinical Genomics Umeå [Service]

Year 2021

PubMed DOI Crossref

A modified protein marker panel to identify four consensus molecular subtypes in colorectal cancer using immunohistochemistry.

Li X, Larsson P, Ljuslinder I, ..., Edin S, Palmqvist R

Pathol Res Pract 220 (-) 153379 [2021-04-00; online 2021-03-05]

Bioinformatics Compute and Storage [Service] Clinical Genomics Umeå [Collaborative]

Year 2020

PubMed DOI Crossref

Parvimonas micra as a putative non-invasive faecal biomarker for colorectal cancer.

Löwenmark T, Löfgren-Burström A, Zingmark C, ..., Edin S, Palmqvist R

Sci Rep 10 (1) 15250 [2020-09-17; online 2020-09-17]

Clinical Genomics Umeå [Collaborative]

PubMed DOI Crossref

DNA methylation and copy number variation profiling of T-cell lymphoblastic leukemia and lymphoma.

Haider Z, Landfors M, Golovleva I, ..., Hultdin M, Degerman S

Blood Cancer J 10 (4) 45 [2020-04-28; online 2020-04-28]

Clinical Genomics Umeå [Service]

PubMed DOI Crossref

Ex Vivo Organoid Cultures Reveal the Importance of the Tumor Microenvironment for Maintenance of Colorectal Cancer Stem Cells.

Li X, Larsson P, Ljuslinder I, ..., Edin S, Palmqvist R

Cancers (Basel) 12 (4) 923 [2020-04-10; online 2020-04-10]

Clinical Genomics Umeå [Collaborative]

Year 2019

PubMed DOI Crossref

An integrated transcriptome analysis in T-cell acute lymphoblastic leukemia links DNA methylation subgroups to dysregulated TAL1 and ANTP homeobox gene expression.

Haider Z, Larsson P, Landfors M, ..., Hultdin M, Degerman S

Cancer Med 8 (1) 311-324 [2019-01-00; online 2018-12-21]

Clinical Genomics Umeå [Collaborative]