G3 (Bethesda)

ISSN	2160-1836
ISSN-L	2160-1836
IUID	ade63f54b7c6477b9fbff045a5f9966d
Modified	2020-11-27T13:14:09.333Z
Created	2017-05-09T09:12:11.065Z

A chromosome-level genome assembly of the European green toad (Bufotes viridis).

Rödin-Mörch P, Bunikis I, Choi E, ..., Proux-Wéra E, Höglund J

G3 (Bethesda) - (-) - [2025-02-19; online 2025-02-19]

NGI Long read [Collaborative] NGI Stockholm (Genomics Production) [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]

PubMed DOI Crossref

Male-biased recombination at chromosome ends in a songbird revealed by precisely mapping crossover positions.

Zhang H, Lundberg M, Ponnikas S, Hasselquist D, Hansson B

G3 (Bethesda) 14 (9) - [2024-09-04; online 2024-07-10]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

The genetic architecture of dog ownership: large-scale genome-wide association study in 97,552 European-ancestry individuals.

Gong T, Karlsson R, Yao S, ..., Fall T, Almqvist C

G3 (Bethesda) 14 (8) - [2024-08-07; online 2024-05-31]

NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Detection of rare variants among nuclei populating the arbuscular mycorrhizal fungal model species Rhizophagus irregularis DAOM197198.

Manyara D, Sánchez-García M, Montoliu-Nerin M, Rosling A

G3 (Bethesda) 14 (6) - [2024-06-05; online 2024-04-24]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

A chromosome-level assembly of the seed beetle Callosobruchus maculatus genome with annotation of its repetitive elements.

Arnqvist G, Westerberg I, Galbraith J, ..., Ewels P, Suh A

G3 (Bethesda) - (-) - [2023-12-13; online 2023-12-13]

Bioinformatics Support for Computational Resources [Service] NGI Other [Service] NGI Short read [Service] NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Demographic reconstruction of the Western sheep expansion from whole-genome sequences.

Morell Miranda P, Soares AER, Günther T

G3 (Bethesda) 13 (11) - [2023-11-01; online 2023-09-07]

Bioinformatics Support for Computational Resources [Service]

PubMed DOI Crossref

Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae).

Steffen K, Proux-Wéra E, Soler L, ..., Sundh J, Cárdenas P

G3 (Bethesda) 13 (10) - [2023-09-30; online 2023-08-25]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Long read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

A chromosome-level genome assembly for the Rock Ptarmigan (Lagopus muta).

Squires TE, Rödin-Mörch P, Formenti G, ..., Höglund J, Magnússon KP

G3 (Bethesda) 13 (7) - [2023-07-05; online 2023-05-04]

Bioinformatics Support for Computational Resources [Service]

PubMed DOI Crossref

An annotated chromosome-scale reference genome for Eastern black-eared wheatear (Oenanthe melanoleuca).

Peona V, Palacios-Gimenez OM, Lutgen D, ..., Suh A, Burri R

G3 (Bethesda) 13 (6) - [2023-06-01; online 2023-04-25]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genetics of tibia bone properties of crossbred commercial laying hens in different housing systems.

Johnsson M, Wall H, Lopes Pinto FA, ..., Kindmark A, de Koning DJ

G3 (Bethesda) - (-) - [2022-12-01; online 2022-12-01]

NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genomic and gene expression associations to morphology of a sexual ornament in the chicken.

Bakovic V, Höglund A, Martin Cerezo ML, Henriksen R, Wright D

G3 (Bethesda) 12 (9) jkac174 [2022-08-25; online 2022-07-09]

Bioinformatics Support for Computational Resources [Service] NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

An empirical evaluation of genotype imputation of ancient DNA.

Ausmees K, Sanchez-Quinto F, Jakobsson M, Nettelblad C

G3 (Bethesda) 12 (6) - [2022-05-30; online 2022-04-29]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genome assemblies of three closely related leaf beetle species (Galerucella spp.).

Yang X, Slotte T, Dainat J, Hambäck PA

G3 (Bethesda) 11 (8) - [2021-08-07; online 2021-12-02]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

Draft Genome Assembly of the Freshwater Apex Predator Wels Catfish (Silurus glanis) Using Linked-Read Sequencing.

Ozerov MY, Flajšhans M, Noreikiene K, Vasemägi A, Gross R

G3 (Bethesda) 10 (11) 3897-3906 [2020-11-05; online 2020-11-05]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Inferring the Genomic Landscape of Recombination Rate Variation in European Aspen ( Populus tremula).

Apuli RP, Bernhardsson C, Schiffthaler B, ..., Street NR, Ingvarsson PK

G3 (Bethesda) - (-) - [2019-11-19; online 2019-11-19]

Bioinformatics Support for Computational Resources [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genome Sequencing of Pleurozium schreberi: The Assembled and Annotated Draft Genome of a Pleurocarpous Feather Moss.

Pederson ERA, Warshan D, Rasmussen U

G3 (Bethesda) 9 (9) 2791-2797 [2019-09-04; online 2019-09-04]

Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Bidirectional Selection for Body Weight on Standing Genetic Variation in a Chicken Model.

Lillie M, Honaker CF, Siegel PB, Carlborg Ö

G3 (Bethesda) 9 (4) 1165-1173 [2019-04-09; online 2019-04-09]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Targeted Long-Read Sequencing of a Locus Under Long-Term Balancing Selection in Capsella

Bachmann JA, Tedder A, Laenen B, Steige KA, Slotte T

G3 (Bethesda) 8 (4) 1327-1333 [2018-02-23; online 2018-02-23]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Heterogeneous Patterns of Genetic Diversity and Differentiation in European and Siberian Chiffchaff ( Phylloscopus collybita abietinus/P. tristis).

Talla V, Kalsoom F, Shipilina D, Marova I, Backström N

G3 (Bethesda) 7 (12) 3983-3998 [2017-12-04; online 2017-12-04]

NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genetic and Targeted eQTL Mapping Reveals Strong Candidate Genes Modulating the Stress Response During Chicken Domestication

Fallahsharoudi A, de Kock N, Johnsson M, ..., Wright D, Jensen P

G3 (Bethesda) 7 (2) 497-504 [2017-02-00; online 2016-12-14]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Imputation-Based Fine-Mapping Suggests That Most QTL in an Outbred Chicken Advanced Intercross Body Weight Line Are Due to Multiple, Linked Loci.

Brandt M, Ahsan M, Honaker CF, Siegel PB, Carlborg Ö

G3 (Bethesda) 7 (1) 119-128 [2017-01-05; online 2017-01-05]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Large Deletions at the SHOX Locus in the Pseudoautosomal Region Are Associated with Skeletal Atavism in Shetland Ponies.

Rafati N, Andersson LS, Mikko S, ..., Lindgren G, Rubin CJ

G3 (Bethesda) 6 (7) 2213-2223 [2016-07-07; online 2016-07-07]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Whole-Genome Sequencing of a Canine Family Trio Reveals a FAM83G Variant Associated with Hereditary Footpad Hyperkeratosis.

Sayyab S, Viluma A, Bergvall K, ..., Andersson G, Bergström TF

G3 (Bethesda) 6 (3) 521-527 [2016-01-08; online 2016-01-08]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Quantitative Trait Locus and Genetical Genomics Analysis Identifies Putatively Causal Genes for Fecundity and Brooding in the Chicken.

Johnsson M, Jonsson KB, Andersson L, Jensen P, Wright D

G3 (Bethesda) 6 (2) 311-319 [2015-12-04; online 2015-12-04]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

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