Publications 2015

Title Authors Journal Published Online
The Urinary Bladder Transcriptome and Proteome Defined by Transcriptomics and Antibody-Based Profiling. Habuka M, Fagerberg L, ..., Yamamoto T, Uhlen M PLoS ONE 10 (12) e0145301 2015-12-22 2015-12-22
Transcriptome analysis reveals mucin 4 to be highly associated with periodontitis and identifies pleckstrin as a link to systemic diseases. Lundmark A, Davanian H, ..., Lundeberg J, Yucel-Lindberg T Sci Rep 5 (-) 18475 2015-12-21 2015-12-21
Exploring water as building bricks in enzyme engineering. Hendil-Forssell P, Martinelle M, Syrén PO Chem. Commun. (Camb.) 51 (97) 17221-17224 2015-12-18 2015-10-02
Metagenome-assembled genomes uncover a global brackish microbiome. Hugerth LW, Larsson J, ..., Pinhassi J, Andersson AF Genome Biol. 16 (-) 279 2015-12-14 2015-12-14
Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation. Soler Artigas M, Wain LV, ..., Hall IP, Tobin MD Nat Commun 6 (-) 8658 2015-12-04 2015-12-04
Quantitative Trait Locus and Genetical Genomics Analysis Identifies Putatively Causal Genes for Fecundity and Brooding in the Chicken. Johnsson M, Jonsson KB, ..., Jensen P, Wright D G3 (Bethesda) 6 (2) 311-319 2015-12-04 2015-12-04
Structural insights into the DNA-binding specificity of E2F family transcription factors. Morgunova E, Yin Y, ..., Nilsson L, Taipale J Nat Commun 6 (-) 10050 2015-12-03 2015-12-03
Within-species divergence in the seminal fluid proteome and its effect on male and female reproduction in a beetle. Goenaga J, Yamane T, Rönn J, Arnqvist G BMC Evol. Biol. 15 (-) 266 2015-12-02 2015-12-02
A Combination of Culture Conditions and Gene Expression Analysis Can Be Used to Investigate and Predict hES Cell Differentiation Potential towards Male Gonadal Cells. Kjartansdóttir KR, Reda A, ..., Hovatta O, Stukenborg JB PLoS ONE 10 (12) e0144029 2015-12-02 2015-12-02
Multi-level omics analysis in a murine model of dystrophin loss and therapeutic restoration. Roberts TC, Johansson HJ, ..., El Andaloussi S, Wood MJ Hum. Mol. Genet. 24 (23) 6756-6768 2015-12-01 2015-09-20
Protein profiling reveals consequences of lifestyle choices on predicted biological aging. Enroth S, Enroth SB, Johansson Å, Gyllensten U Sci Rep 5 (-) 17282 2015-12-01 2015-12-01
Dietary Fiber-Induced Improvement in Glucose Metabolism Is Associated with Increased Abundance of Prevotella. Kovatcheva-Datchary P, Nilsson A, ..., Björck I, Bäckhed F Cell Metab. 22 (6) 971-982 2015-12-01 2015-11-11
Highly Sensitive FRET-FCS Detects Amyloid β-Peptide Oligomers in Solution at Physiological Concentrations. Wennmalm S, Chmyrov V, Widengren J, Tjernberg L Anal. Chem. 87 (23) 11700-11705 2015-12-01 2015-10-23
Metabolic Profiling of Chicken Embryos Exposed to Perfluorooctanoic Acid (PFOA) and Agonists to Peroxisome Proliferator-Activated Receptors. Mattsson A, Kärrman A, Pinto R, Brunström B PLoS ONE 10 (12) e0143780 2015-12-01 2015-12-01
Gene-based meta-analysis of genome-wide association studies implicates new loci involved in obesity. Hägg S, Ganna A, ..., Pawitan Y, Ingelsson E Hum. Mol. Genet. 24 (23) 6849-6860 2015-12-01 2015-09-18
Associations between circulating proteins and corresponding genes expressed in coronary thrombi in patients with acute myocardial infarction. Helseth R, Weiss TW, ..., Arnesen H, Seljeflot S Thromb. Res. 136 (6) 1240-1244 2015-12-00 2015-10-18
Bacterial diversity along a 2600 km river continuum. Savio D, Sinclair L, ..., Farnleitner AH, Eiler A Environ. Microbiol. 17 (12) 4994-5007 2015-12-00 2015-04-30
Identification of proteins from human permanent erupted enamel. Castiblanco GA, Rutishauser D, ..., Castellanos JE, Mejía W Eur. J. Oral Sci. 123 (6) 390-395 2015-12-00 2015-10-04
Captured metagenomics: large-scale targeting of genes based on 'sequence capture' reveals functional diversity in soils. Manoharan L, Kushwaha SK, Hedlund K, Ahrén D DNA Res. 22 (6) 451-460 2015-12-00 2015-10-23
Genetic fine mapping and genomic annotation defines causal mechanisms at type 2 diabetes susceptibility loci. Gaulton KJ, Ferreira T, ..., Morris AP, DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium None Nat. Genet. 47 (12) 1415-1425 2015-12-00 2015-11-10
Emmprin Expression Predicts Response and Survival following Cisplatin Containing Chemotherapy for Bladder Cancer: A Validation Study. Hemdan T, Malmström PU, Jahnson S, Segersten U J. Urol. 194 (6) 1575-1581 2015-12-00 2015-06-30
Genetic association analyses implicate aberrant regulation of innate and adaptive immunity genes in the pathogenesis of systemic lupus erythematosus. Bentham J, Morris DL, ..., Alarcón-Riquelme ME, Vyse TJ Nat. Genet. 47 (12) 1457-1464 2015-12-00 2015-10-27
The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome. Hurst LD, Ghanbarian AT, ..., FANTOM consortium None, Huminiecki L PLoS Biol. 13 (12) e1002315 2015-12-00 2015-12-18
The Plant Genome Integrative Explorer Resource: Sundell D, Mannapperuma C, ..., Hvidsten TR, Street NR New Phytol. 208 (4) 1149-1156 2015-12-00 2015-07-21
Amelioration of the Fitness Costs of Antibiotic Resistance Due To Reduced Outer Membrane Permeability by Upregulation of Alternative Porins. Knopp M, Andersson DI Mol. Biol. Evol. 32 (12) 3252-3263 2015-12-00 2015-09-12
Phenotypic expansion of visceral myopathy associated with ACTG2 tandem base substitution. Klar J, Raykova D, ..., Wanders A, Dahl N Eur. J. Hum. Genet. 23 (12) 1679-1683 2015-12-00 2015-03-19
The body mass index (BMI) is significantly correlated with levels of cytokines and chemokines in cerebrospinal fluid. Larsson A, Carlsson L, ..., Kamali-Moghaddam M, Thulin M Cytokine 76 (2) 514-518 2015-12-00 2015-07-21
Characterization of human organ donors testing positive for type 1 diabetes-associated autoantibodies. Wiberg A, Granstam A, ..., Korsgren O, Skog O Clin. Exp. Immunol. 182 (3) 278-288 2015-12-00 2015-08-28
Bioenergetic cues shift FXR splicing towards FXRα2 to modulate hepatic lipolysis and fatty acid metabolism. Correia JC, Massart J, ..., Groen AK, Ruas JL Mol Metab 4 (12) 891-902 2015-12-00 2015-09-26
Discovery of New Risk Markers for Ischemic Stroke Using a Novel Targeted Proteomics Chip. Lind L, Siegbahn A, ..., Sundström J, Ärnlöv J Stroke 46 (12) 3340-3347 2015-12-00 2015-11-07
Oral microbiota in patients with atherosclerosis. Fåk F, Tremaroli V, Bergström G, Bäckhed F Atherosclerosis 243 (2) 573-578 2015-12-00 2015-11-05
Nanocellulose from green algae modulates the in vitro inflammatory response of monocytes/macrophages Hua K, Strømme M, Mihranyan A, Ferraz N Cellulose 22 (6) 3673-3688 2015-12-00 2015-10-03
Susceptibility to infections, without concomitant hyper-IgE, reported in 1976, is caused by hypomorphic mutation in the phosphoglucomutase 3 (PGM3) gene. Lundin KE, Hamasy A, ..., Stenmark S, Smith CI Clin. Immunol. 161 (2) 366-372 2015-12-00 2015-10-21
Multi-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis. Paternoster L, Standl M, ..., Weidinger S, EArly Genetics and Lifecourse Epidemiology (EAGLE) Eczema Consortium None Nat. Genet. 47 (12) 1449-1456 2015-12-00 2015-10-21
Freshwater protists do not go with the flow: population structure in Gonyostomum semen independent of connectivity among lakes. Sassenhagen I, Sefbom J, ..., Godhe A, Rengefors K Environ. Microbiol. 17 (12) 5063-5072 2015-12-00 2015-07-18
Selenium metabolism to the trimethylselenonium ion (TMSe) varies markedly because of polymorphisms in the indolethylamine N-methyltransferase gene. Kuehnelt D, Engström K, ..., Broberg K, Vahter M Am. J. Clin. Nutr. 102 (6) 1406-1415 2015-12-00 2015-11-06
De novo assembly of Dekkera bruxellensis: a multi technology approach using short and long-read sequencing and optical mapping. Olsen RA, Bunikis I, ..., Käller M, Vezzi F Gigascience 4 (-) 56 2015-11-26 2015-11-26
Genome-Wide Association Study Identifies That the ABO Blood Group System Influences Interleukin-10 Levels and the Risk of Clinical Events in Patients with Acute Coronary Syndrome. Johansson Å, Alfredsson J, ..., Wallentin L, Siegbahn A PLoS ONE 10 (11) e0142518 2015-11-24 2015-11-24
Combinations of Genetic Data Present in Bipolar Patients, but Absent in Control Persons. Mellerup E, Andreassen OA, ..., Werge T, Moeller GL PLoS ONE 10 (11) e0143432 2015-11-20 2015-11-20
Complete genome sequence of Staphylococcus aureus, strain ILRI_Eymole1/1, isolated from a Kenyan dromedary camel. Zubair S, Fischer A, ..., Bongcam-Rudloff E, Jores J Stand Genomic Sci 10 (-) 109 2015-11-20 2015-11-20
A Conserved Odorant Receptor Detects the Same 1-Indanone Analogs in a Tortricid and a Noctuid Moth Gonzalez F, Bengtsson JM, ..., Ignell R, Bengtsson M Front. Ecol. Evol. 3 (-) - 2015-11-19 2015-11-19
RNA sequencing uncovers antisense RNAs and novel small RNAs in Streptococcus pyogenes. Le Rhun A, Beer YY, ..., Chylinski K, Charpentier E RNA Biol 13 (2) 177-195 2015-11-19 2015-11-19
DNA-dependent formation of transcription factor pairs alters their binding specificity. Jolma A, Yin Y, ..., Morgunova E, Taipale J Nature 527 (7578) 384-388 2015-11-19 2015-11-10
Single cell analysis of cancer cells using an improved RT-MLPA method has potential for cancer diagnosis and monitoring. Kvastad L, Werne Solnestam B, ..., Latta D, Lundeberg J Sci Rep 5 (-) 16519 2015-11-12 2015-11-12
Immunocapture strategies in translational proteomics. Fredolini C, Byström S, ..., Nilsson P, Schwenk JM Expert Rev Proteomics 13 (1) 83-98 2015-11-11 2015-11-11
Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3. Manzoor S, Müller B, ..., Schnürer A, Bongcam-Rudloff E Stand Genomic Sci 10 (-) 99 2015-11-11 2015-11-11
Normalization of Host Intestinal Mucus Layers Requires Long-Term Microbial Colonization. Johansson ME, Jakobsson HE, ..., Bäckhed F, Hansson GC Cell Host Microbe 18 (5) 582-592 2015-11-11 2015-11-04
Effect of genetic and environmental factors on protein biomarkers for common non-communicable disease and use of personally normalized plasma protein profiles (PNPPP). Enroth S, Bosdotter Enroth S, Johansson Å, Gyllensten U Biomarkers 20 (6-7) 355-364 2015-11-09 2015-11-09
Meta-analysis identifies seven susceptibility loci involved in the atopic march. Marenholz I, Esparza-Gordillo J, ..., Henderson AJ, Lee YA Nat Commun 6 (-) 8804 2015-11-06 2015-11-06
Dominant Genetic Variation and Missing Heritability for Human Complex Traits: Insights from Twin versus Genome-wide Common SNP Models. Chen X, Kuja-Halkola R, ..., Pedersen NL, Magnusson PK Am. J. Hum. Genet. 97 (5) 708-714 2015-11-05 2015-11-07
Intra-mitochondrial Methylation Deficiency Due to Mutations in SLC25A26. Kishita Y, Pajak A, ..., Okazaki Y, Wedell A Am. J. Hum. Genet. 97 (5) 761-768 2015-11-05 2015-11-03
In search for symmetries in the metabolism of cancer. Gatto F, Nielsen J Wiley Interdiscip Rev Syst Biol Med 8 (1) 23-35 2015-11-05 2015-11-05
Quantitative proteogenomics of human pathogens using DIA-MS. Malmström L, Bakochi A, ..., Karlsson C, Malmström J J Proteomics 129 (-) 98-107 2015-11-03 2015-09-19
The Role of FTO and Vitamin D for the Weight Loss Effect of Roux-en-Y Gastric Bypass Surgery in Obese Patients. Bandstein M, Schultes B, ..., Schiöth HB, Benedict C Obes Surg 25 (11) 2071-2077 2015-11-00 2015-03-01
Resolving Evolutionary Relationships in Closely Related Species with Whole-Genome Sequencing Data. Nater A, Burri R, ..., Smeds L, Ellegren H Syst. Biol. 64 (6) 1000-1017 2015-11-00 2015-07-19
High-Throughput Sequencing Reveals Drastic Changes in Fungal Communities in the Phyllosphere of Norway Spruce (Picea abies) Following Invasion of the Spruce Bud Scale (Physokermes piceae). Menkis A, Marčiulynas A, ..., Lynikienė J, Povilaitienė A Microb. Ecol. 70 (4) 904-911 2015-11-00 2015-06-10
Mutation in CEP63 co-segregating with developmental dyslexia in a Swedish family. Einarsdottir E, Svensson I, ..., Kere J, Matsson H Hum. Genet. 134 (11-12) 1239-1248 2015-11-00 2015-09-25
Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin. Wu G, Zhao H, ..., Nagarajan N, Dawson TL PLoS Genet. 11 (11) e1005614 2015-11-00 2015-11-05
Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution. Martijn J, Schulz F, ..., Guy L, Ettema TJ ISME J 9 (11) 2373-2385 2015-11-00 2015-04-08
The Human Endometrium-Specific Proteome Defined by Transcriptomics and Antibody-Based Profiling. Zieba A, Sjöstedt E, ..., Uhlen M, Ponten F OMICS 19 (11) 659-668 2015-11-00 2015-10-22
Early Exposure to Dogs and Farm Animals and the Risk of Childhood Asthma. Fall T, Lundholm C, ..., Ingelsson E, Almqvist C JAMA Pediatr 169 (11) e153219 2015-11-00 2015-11-02
Herring and Beef Meals Lead to Differences in Plasma 2-Aminoadipic Acid, β-Alanine, 4-Hydroxyproline, Cetoleic Acid, and Docosahexaenoic Acid Concentrations in Overweight Men. Ross AB, Svelander C, ..., Pinto R, Sandberg AS J. Nutr. 145 (11) 2456-2463 2015-11-00 2015-09-25
Rescue of primary ubiquinone deficiency due to a novel COQ7 defect using 2,4-dihydroxybensoic acid. Freyer C, Stranneheim H, ..., Wredenberg A, Wedell A J. Med. Genet. 52 (11) 779-783 2015-11-00 2015-06-19
HaloPlex Targeted Resequencing for Mutation Detection in Clinical Formalin-Fixed, Paraffin-Embedded Tumor Samples. Moens LN, Falk-Sörqvist E, ..., Nilsson M, Botling J J Mol Diagn 17 (6) 729-739 2015-11-00 2015-09-12
Assessing the consistency of public human tissue RNA-seq data sets. Danielsson F, James T, Gomez-Cabrero D, Huss M Brief. Bioinformatics 16 (6) 941-949 2015-11-00 2015-04-02
Exploring the genetics of irritable bowel syndrome: a GWA study in the general population and replication in multinational case-control cohorts. Ek WE, Reznichenko A, ..., Wouters MM, D'Amato M Gut 64 (11) 1774-1782 2015-11-00 2014-09-25
Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers. Burri R, Nater A, ..., Török J, Ellegren H Genome Res. 25 (11) 1656-1665 2015-11-00 2015-09-12
Variant Profiling of Candidate Genes in Pancreatic Ductal Adenocarcinoma. Huang J, Löhr JM, ..., Zheng Z, Ye W Clin. Chem. 61 (11) 1408-1416 2015-11-00 2015-09-18
Impact of asymmetric male and female gamete dispersal on allelic diversity and spatial genetic structure in valley oak (Quercus lobata Née) Sork VL, Smouse PE, Grivet D, Scofield DG Evol Ecol 29 (6) 927-945 2015-11-00 2015-11-12
Metagenomic sequencing of marine periphyton: taxonomic and functional insights into biofilm communities. Sanli K, Bengtsson-Palme J, ..., Blanck H, Eriksson KM Front Microbiol 6 (-) 1192 2015-10-30 2015-10-30
Quinolone resistance mutations in the faecal microbiota of Swedish travellers to India. Johnning A, Kristiansson E, ..., Johansson A, Larsson DG BMC Microbiol. 15 (-) 235 2015-10-24 2015-10-24
Genetic Polymorphisms in Vitamin D Metabolism and Signaling Genes and Risk of Breast Cancer: A Nested Case-Control Study. Clendenen TV, Ge W, ..., Sund M, Zeleniuch-Jacquotte A PLoS ONE 10 (10) e0140478 2015-10-21 2015-10-21
Nurr1 and Retinoid X Receptor Ligands Stimulate Ret Signaling in Dopamine Neurons and Can Alleviate α-Synuclein Disrupted Gene Expression. Volakakis N, Tiklova K, ..., Björklund A, Perlmann T J. Neurosci. 35 (42) 14370-14385 2015-10-21 2015-10-23
Membrane vesicle-mediated release of bacterial RNA. Sjöström AE, Sandblad L, Uhlin BE, Wai SN Sci Rep 5 (-) 15329 2015-10-20 2015-10-20
Structure-activity relationships for lipoprotein lipase agonists that lower plasma triglycerides in vivo. Caraballo R, Larsson M, ..., Enquist PA, Elofsson M Eur J Med Chem 103 (-) 191-209 2015-10-20 2015-09-12
Noncanoncial signal recognition particle RNAs in a major eukaryotic phylum revealed by purification of SRP from the human pathogen Cryptococcus neoformans. Dumesic PA, Rosenblad MA, ..., Yates JR, Madhani HD Nucleic Acids Res. 43 (18) 9017-9027 2015-10-15 2015-08-16
Mutation in NRAS in familial Noonan syndrome--case report and review of the literature. Ekvall S, Wilbe M, ..., Annerén G, Bondeson ML BMC Med. Genet. 16 (-) 95 2015-10-14 2015-10-14
The folate-coupled enzyme MTHFD2 is a nuclear protein and promotes cell proliferation. Gustafsson Sheppard N, Jarl L, ..., Jain M, Nilsson R Sci Rep 5 (-) 15029 2015-10-13 2015-10-13
Brachyspira suanatina sp. nov., an enteropathogenic intestinal spirochaete isolated from pigs and mallards: genomic and phenotypic characteristics. Mushtaq M, Zubair S, ..., Bongcam-Rudloff E, Jansson DS BMC Microbiol. 15 (-) 208 2015-10-12 2015-10-12
Genome-wide transcriptional and physiological responses to drought stress in leaves and roots of two willow genotypes. Pucholt P, Sjödin P, ..., Rönnberg-Wästljung AC, Berlin S BMC Plant Biol. 15 (-) 244 2015-10-12 2015-10-12
Evaluation of whole-genome sequencing of four Chinese crested dogs for variant detection using the ion proton system. Viluma A, Sayyab S, ..., Andersson G, Bergström TF Canine Genet Epidemiol 2 (-) 16 2015-10-08 2015-10-08
Many obesity-associated SNPs strongly associate with DNA methylation changes at proximal promoters and enhancers. Voisin S, Almén MS, ..., Rask-Andersen M, Schiöth HB Genome Med 7 (-) 103 2015-10-08 2015-10-08
Comparative Sigma Factor-mRNA Levels in Mycobacterium marinum under Stress Conditions and during Host Infection. Pettersson BM, Das S, ..., Ennis DG, Kirsebom LA PLoS ONE 10 (10) e0139823 2015-10-07 2015-10-07
Crosstalk between Gut Microbiota and Dietary Lipids Aggravates WAT Inflammation through TLR Signaling. Caesar R, Tremaroli V, ..., Cani PD, Bäckhed F Cell Metab. 22 (4) 658-668 2015-10-06 2015-09-01
Standing genetic variation as a major contributor to adaptation in the Virginia chicken lines selection experiment. Sheng Z, Pettersson ME, ..., Siegel PB, Carlborg Ö Genome Biol. 16 (-) 219 2015-10-01 2015-10-01
Candidate gene analysis and exome sequencing confirm LBX1 as a susceptibility gene for idiopathic scoliosis. Grauers A, Wang J, ..., Kere J, Gerdhem P Spine J 15 (10) 2239-2246 2015-10-01 2015-05-20
Spatiotemporal Heterogeneity Characterizes the Genetic Landscape of Pheochromocytoma and Defines Early Events in Tumorigenesis. Crona J, Backman S, ..., Hellman P, Björklund P Clin. Cancer Res. 21 (19) 4451-4460 2015-10-01 2015-05-21
Transcriptome Profiling Reveals Degree of Variability in Induced Pluripotent Stem Cell Lines: Impact for Human Disease Modeling. Schuster J, Halvardson J, ..., Feuk L, Dahl N Cell Reprogram 17 (5) 327-337 2015-10-00 2015-09-09
Genetic variance estimation with imputed variants finds negligible missing heritability for human height and body mass index. Yang J, Bakshi A, ..., Goddard ME, Visscher PM Nat. Genet. 47 (10) 1114-1120 2015-10-00 2015-09-01
Signatures of post-zygotic structural genetic aberrations in the cells of histologically normal breast tissue that can predispose to sporadic breast cancer. Forsberg LA, Rasi C, ..., Tot T, Dumanski JP Genome Res. 25 (10) 1521-1535 2015-10-00 2015-10-03
The Human Glioblastoma Cell Culture Resource: Validated Cell Models Representing All Molecular Subtypes. Xie Y, Bergström T, ..., Forsberg-Nilsson K, Uhrbom L EBioMedicine 2 (10) 1351-1363 2015-10-00 2015-08-15
Acid-Base Catalyst Discriminates between a Fructose 6-Phosphate Aldolase and a Transaldolase Stellmacher L, Sandalova T, ..., Sprenger GA, Samland AK ChemCatChem 7 (19) 3140-3151 2015-10-00 2015-08-06
Cytostatic Effect of Repeated Exposure to Simvastatin: A Mechanism for Chronic Myotoxicity Revealed by the Use of Mesodermal Progenitors Derived from Human Pluripotent Stem Cells. Peric D, Barragan I, ..., Laustriat D, Peschanski M Stem Cells 33 (10) 2936-2948 2015-10-00 2015-07-18
Quantitative Mass Spectrometry Reveals Partial Translational Regulation for Dosage Compensation in Chicken. Uebbing S, Konzer A, ..., Bergquist J, Ellegren H Mol. Biol. Evol. 32 (10) 2716-2725 2015-10-00 2015-06-26
The Influence of Age and Sex on Genetic Associations with Adult Body Size and Shape: A Large-Scale Genome-Wide Interaction Study. Winkler TW, Justice AE, ..., Kutalik Z, Loos RJ PLoS Genet. 11 (10) e1005378 2015-10-00 2015-10-01
Trimeric microsomal glutathione transferase 2 displays one third of the sites reactivity. Ahmad S, Thulasingam M, ..., Haeggström JZ, Rinaldo-Matthis A Biochim. Biophys. Acta 1854 (10 Pt A) 1365-1371 2015-10-00 2015-06-13
A New Method for Detecting Associations with Rare Copy-Number Variants. Tzeng JY, Magnusson PK, ..., Swedish Schizophrenia Consortium None, Szatkiewicz JP PLoS Genet. 11 (10) e1005403 2015-10-00 2015-10-02
Cis-Regulatory Changes Associated with a Recent Mating System Shift and Floral Adaptation in Capsella. Steige KA, Reimegård J, ..., Scofield DG, Slotte T Mol. Biol. Evol. 32 (10) 2501-2514 2015-10-00 2015-09-01
BCG Skin Infection Triggers IL-1R-MyD88-Dependent Migration of EpCAMlow CD11bhigh Skin Dendritic cells to Draining Lymph Node During CD4+ T-Cell Priming. Bollampalli VP, Harumi Yamashiro L, ..., Nylén S, Rothfuchs AG PLoS Pathog. 11 (10) e1005206 2015-10-00 2015-10-06
The effects of age and gender on plasma levels of 63 cytokines. Larsson A, Carlsson L, ..., Thulin M, Kamali-Moghaddam M J. Immunol. Methods 425 (-) 58-61 2015-10-00 2015-06-17
Isolation of novel IncA/C and IncN fluoroquinolone resistance plasmids from an antibiotic-polluted lake. Flach CF, Johnning A, ..., Kristiansson E, Larsson DG J. Antimicrob. Chemother. 70 (10) 2709-2717 2015-10-00 2015-07-01
The Human Gut Microbiome as a Transporter of Antibiotic Resistance Genes between Continents. Bengtsson-Palme J, Angelin M, ..., Larsson DG, Johansson A Antimicrob. Agents Chemother. 59 (10) 6551-6560 2015-10-00 2015-08-12
The use of gene arrays and corresponding connectivity mapping (Cmap) to identify novel anti-ageing ingredients. Gillbro JM, Merinville E, ..., Visdal-Johnsen L, Mavon A Int J Cosmet Sci 37 Suppl 1 (-) 9-14 2015-10-00 2015-06-27
Dibenzocyclooctadiene lignans from Schisandra spp. selectively inhibit the growth of the intracellular bacteria Chlamydia pneumoniae and Chlamydia trachomatis. Hakala E, Hanski L, ..., Elofsson M, Vuorela PM J. Antibiot. 68 (10) 609-614 2015-10-00 2015-05-07
Profound parental bias associated with chromosome 14 acquired uniparental disomy indicates targeting of an imprinted locus. Chase A, Leung W, ..., Dumanski JP, Cross NC Leukemia 29 (10) 2069-2074 2015-10-00 2015-06-27
A comprehensive 1,000 Genomes-based genome-wide association meta-analysis of coronary artery disease. Nikpay M, Goel A, ..., Farrall M, CARDIoGRAMplusC4D Consortium None Nat. Genet. 47 (10) 1121-1130 2015-10-00 2015-09-08
Cerebrospinal fluid monoamine metabolite concentrations as intermediate phenotypes between glutamate-related genes and psychosis. Andreou D, Söderman E, ..., Agartz I, Jönsson EG Psychiatry Res 229 (1-2) 497-504 2015-09-30 2015-07-06
Identification of Novel Epigenetic Markers of Prostate Cancer by NotI-Microarray Analysis. Dmitriev AA, Rosenberg EE, ..., Senchenko VN, Kashuba VI Dis. Markers 2015 (-) 241301 2015-09-28 2015-09-28
Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies). Delhomme N, Sundström G, ..., Grabherr MG, Street NR PLoS ONE 10 (9) e0139080 2015-09-28 2015-09-28
Exploring microbial dark matter to resolve the deep archaeal ancestry of eukaryotes. Saw JH, Spang A, ..., Guy L, Ettema TJ Philos. Trans. R. Soc. Lond., B, Biol. Sci. 370 (1678) 20140328 2015-09-26 2015-09-02
The genomes of three stocks comprising the most widely utilized live sporozoite Theileria parva vaccine exhibit very different degrees and patterns of sequence divergence. Norling M, Bishop RP, ..., Daubenberger CA, Silva JC BMC Genomics 16 (-) 729 2015-09-24 2015-09-24
Ancient genomes link early farmers from Atapuerca in Spain to modern-day Basques. Günther T, Valdiosera C, ..., Götherström A, Jakobsson M Proc. Natl. Acad. Sci. U.S.A. 112 (38) 11917-11922 2015-09-22 2015-09-10
Dormant phages of Helicobacter pylori reveal distinct populations in Europe. Vale FF, Vadivelu J, ..., Mégraud F, Lehours P Sci Rep 5 (-) 14333 2015-09-21 2015-09-21
Draft genome sequence of 'Treponema phagedenis' strain V1, isolated from bovine digital dermatitis. Mushtaq M, Manzoor S, ..., Rosander A, Bongcam-Rudloff E Stand Genomic Sci 10 (-) 67 2015-09-21 2015-09-21
Gene expression profiling of pre-eclamptic placentae by RNA sequencing. Kaartokallio T, Cervera A, ..., Laivuori H, FINNPEC Core Investigator Group None Sci Rep 5 (-) 14107 2015-09-21 2015-09-21
PARP1- and CTCF-Mediated Interactions between Active and Repressed Chromatin at the Lamina Promote Oscillating Transcription. Zhao H, Sifakis EG, ..., Imreh MP, Göndör A Mol. Cell 59 (6) 984-997 2015-09-17 2015-09-01
Genetic and morphological evidence for introgression between three species of willows. Fogelqvist J, Verkhozina AV, ..., Lascoux M, Berlin S BMC Evol. Biol. 15 (-) 193 2015-09-16 2015-09-16
Comprehensive analysis of microRNA expression in regionalized human neural progenitor cells reveals microRNA-10 as a caudalizing factor. Jönsson ME, Nelander Wahlestedt J, ..., Jakobsson J, Parmar M Development 142 (18) 3166-3177 2015-09-15 2015-09-24
WNT3 involvement in human bladder exstrophy and cloaca development in zebrafish. Baranowska Körberg I, Hofmeister W, ..., Lindstrand A, Nordenskjöld A Hum. Mol. Genet. 24 (18) 5069-5078 2015-09-15 2015-06-25
Genetics and Prognostication in Splenic Marginal Zone Lymphoma: Revelations from Deep Sequencing. Parry M, Rose-Zerilli MJ, ..., Oscier D, Strefford JC Clin. Cancer Res. 21 (18) 4174-4183 2015-09-15 2015-03-18
HLA class I is most tightly linked to levels of tapasin compared with other antigen-processing proteins in glioblastoma. Thuring C, Follin E, ..., Buus S, Paulsson KM Br. J. Cancer 113 (6) 952-962 2015-09-15 2015-08-28
Surface Chemistry of Nanocellulose Fibers Directs Monocyte/Macrophage Response. Hua K, Ålander E, ..., Strømme M, Ferraz N Biomacromolecules 16 (9) 2787-2795 2015-09-14 2015-08-08
Determination of obesity associated gene variants related to TMEM18 through ultra-deep targeted re-sequencing in a case-control cohort for pediatric obesity. Rask-Andersen M, Sällman Almén M, ..., Fredriksson R, Schiöth HB Genet Res (Camb) 97 (-) e16 2015-09-14 2015-09-14
Rare and low-frequency variants and their association with plasma levels of fibrinogen, FVII, FVIII, and vWF. Huffman JE, de Vries PS, ..., O'Donnell CJ, Smith NL Blood 126 (11) e19-e29 2015-09-10 2015-06-25
The epigenetic signature of subcutaneous fat cells is linked to altered expression of genes implicated in lipid metabolism in obese women. Arner P, Sinha I, ..., Dahlman-Wright K, Dahlman I Clin Epigenetics 7 (-) 93 2015-09-08 2015-09-08
Paternally expressed imprinted genes establish postzygotic hybridization barriers in Arabidopsis thaliana. Wolff P, Jiang H, ..., Santos-González J, Köhler C Elife 4 (-) - 2015-09-07 2015-09-07
Metrics for the Human Proteome Project 2015: Progress on the Human Proteome and Guidelines for High-Confidence Protein Identification. Omenn GS, Lane L, ..., Nesvizhskii AI, Deutsch EW J. Proteome Res. 14 (9) 3452-3460 2015-09-04 2015-07-15
Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project. Horvatovich P, Lundberg EK, ..., Paik YK, Hancock WS J. Proteome Res. 14 (9) 3415-3431 2015-09-04 2015-06-16
High cortisol in 5-year-old children causes loss of DNA methylation in SINE retrotransposons: a possible role for ZNF263 in stress-related diseases. Nätt D, Johansson I, ..., Ludvigsson J, Thorsell A Clin Epigenetics 7 (-) 91 2015-09-04 2015-09-04
Pseudomonas aeruginosa lasI/rhlI quorum sensing genes promote phagocytosis and aquaporin 9 redistribution to the leading and trailing regions in macrophages. Holm A, Karlsson T, Vikström E Front Microbiol 6 (-) 915 2015-09-03 2015-09-03
Mutations in SLC12A5 in epilepsy of infancy with migrating focal seizures. Stödberg T, McTague A, ..., Wedell A, Kurian MA Nat Commun 6 (-) 8038 2015-09-03 2015-09-03
An Exopolysaccharide-Deficient Mutant of Lactobacillus rhamnosus GG Efficiently Displays a Protective Llama Antibody Fragment against Rotavirus on Its Surface. Álvarez B, Krogh-Andersen K, ..., Hammarström L, Marcotte H Appl. Environ. Microbiol. 81 (17) 5784-5793 2015-09-01 2015-06-21
Transplanted Bone Marrow-Derived Cells Contribute to Human Adipogenesis. Rydén M, Uzunel M, ..., Mattsson J, Arner P Cell Metab. 22 (3) 408-417 2015-09-01 2015-07-21
Whole exome sequencing identifies LRP1 as a pathogenic gene in autosomal recessive keratosis pilaris atrophicans. Klar J, Schuster J, ..., Baig SM, Dahl N J. Med. Genet. 52 (9) 599-606 2015-09-00 2015-07-05
Half-of-the-Sites Reactivity of the Castor Δ9-18:0-Acyl Carrier Protein Desaturase. Liu Q, Chai J, ..., Lindqvist Y, Shanklin J Plant Physiol. 169 (1) 432-441 2015-09-00 2015-08-01
Acute Sleep Loss Induces Tissue-Specific Epigenetic and Transcriptional Alterations to Circadian Clock Genes in Men. Cedernaes J, Osler ME, ..., Schiöth HB, Benedict C J. Clin. Endocrinol. Metab. 100 (9) E1255-E1261 2015-09-00 2015-07-15
Transcriptomics of colour patterning and coloration shifts in crows. Poelstra JW, Vijay N, Hoeppner MP, Wolf JB Mol. Ecol. 24 (18) 4617-4628 2015-09-00 2015-08-25
Use of a proximity extension assay proteomics chip to discover new biomarkers for human atherosclerosis. Lind L, Ärnlöv J, ..., Sundström J, Ingelsson E Atherosclerosis 242 (1) 205-210 2015-09-00 2015-07-24
Exome sequencing followed by genotyping suggests SYPL2 as a susceptibility gene for morbid obesity. Jiao H, Arner P, ..., Kere J, Dahlman I Eur. J. Hum. Genet. 23 (9) 1216-1222 2015-09-00 2014-11-20
Shared immunological targets in the lungs and joints of patients with rheumatoid arthritis: identification and validation. Ytterberg AJ, Joshua V, ..., Klareskog L, Catrina AI Ann. Rheum. Dis. 74 (9) 1772-1777 2015-09-00 2014-05-13
Synthesis of enantiopure angiotensin II type 2 receptor [AT2R] antagonist EMA401 Wakchaure PB, Bremberg U, Wannberg J, Larhed M Tetrahedron 71 (38) 6881-6887 2015-09-00 2015-09-00
Analysis of the genetic architecture of susceptibility to cervical cancer indicates that common SNPs explain a large proportion of the heritability. Chen D, Cui T, ..., Wang H, Gyllensten U Carcinogenesis 36 (9) 992-998 2015-09-00 2015-06-06
Polymorphisms in the FK506 binding protein 5 gene are associated with attention deficit hyperactivity disorder and diurnal cortisol levels. Isaksson J, Allen M, Nilsson KW, Lindblad F Acta Paediatr. 104 (9) 910-915 2015-09-00 2015-06-03
Altered serotonin (5-HT) 1D and 2A receptor expression may contribute to defective insulin and glucagon secretion in human type 2 diabetes. Bennet H, Balhuizen A, ..., Wierup N, Fex M Peptides 71 (-) 113-120 2015-09-00 2015-07-25
Auxotrophy and intrapopulation complementary in the 'interactome' of a cultivated freshwater model community. Garcia SL, Buck M, ..., Eiler A, Warnecke F Mol. Ecol. 24 (17) 4449-4459 2015-09-00 2015-07-17
Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel. Kharaziha P, Chioureas D, ..., Nilsson S, Panaretakis T Oncotarget 6 (25) 21740-21754 2015-08-28 2015-04-07
BEX1 acts as a tumor suppressor in acute myeloid leukemia. Lindblad O, Li T, ..., Rönnstrand L, Kazi JU Oncotarget 6 (25) 21395-21405 2015-08-28 2015-06-06
Microfluidic screening and whole-genome sequencing identifies mutations associated with improved protein secretion by yeast. Huang M, Bai Y, ..., Andersson-Svahn H, Nielsen J Proc. Natl. Acad. Sci. U.S.A. 112 (34) E4689-E4696 2015-08-25 2015-08-12
Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica. Gkarmiri K, Finlay RD, ..., Cubeta MA, Högberg N BMC Genomics 16 (-) 630 2015-08-22 2015-08-22
Structure of the Glycosyltransferase Ktr4p from Saccharomyces cerevisiae. Possner DD, Claesson M, Guy JE PLoS ONE 10 (8) e0136239 2015-08-21 2015-08-21
In Vitro and In Vivo Response to Low-Modulus PMMA-Based Bone Cement. Carlsson E, Mestres G, ..., Larsson S, Persson C Biomed Res Int 2015 (-) 594284 2015-08-20 2015-08-20
Personality and intelligence: persistence, not self-directedness, cooperativeness or self-transcendence, is related to twins' cognitive abilities. Mousavi F, Rozsa S, ..., Anckarsäter H, Garcia D PeerJ 3 (-) e1195 2015-08-20 2015-08-20
Experiences with workflows for automating data-intensive bioinformatics. Spjuth O, Bongcam-Rudloff E, ..., Siretskiy A, Vassilev D Biol. Direct 10 (-) 43 2015-08-19 2015-08-19
Complementing tissue characterization by integrating transcriptome profiling from the Human Protein Atlas and from the FANTOM5 consortium. Yu NY, Hallström BM, ..., Uhlén M, Daub CO Nucleic Acids Res. 43 (14) 6787-6798 2015-08-18 2015-06-29
The Ty1-copia LTR retroelement family PARTC is highly conserved in conifers over 200 MY of evolution. Zuccolo A, Scofield DG, De Paoli E, Morgante M Gene 568 (1) 89-99 2015-08-15 2015-05-20
Genome-wide association study of toxic metals and trace elements reveals novel associations. Ng E, Lind PM, ..., Morris A, Lind L Hum. Mol. Genet. 24 (16) 4739-4745 2015-08-15 2015-05-31
Gene × dietary pattern interactions in obesity: analysis of up to 68 317 adults of European ancestry. Nettleton JA, Follis JL, ..., Loos RJ, Franks PW Hum. Mol. Genet. 24 (16) 4728-4738 2015-08-15 2015-05-23
Sex-Specific Effects of Adiponectin on Carotid Intima-Media Thickness and Incident Cardiovascular Disease. Persson J, Strawbridge RJ, ..., Hamsten A, IMPROVE Study Group None J Am Heart Assoc 4 (8) e001853 2015-08-14 2015-08-14
Adaptive mutations in sugar metabolism restore growth on glucose in a pyruvate decarboxylase negative yeast strain. Zhang Y, Liu G, ..., Siewers V, Nielsen J Microb. Cell Fact. 14 (-) 116 2015-08-08 2015-08-08
Microstructural White Matter Properties Mediate the Association between APOE and Perceptual Speed in Very Old Persons without Dementia. Laukka EJ, Lövdén M, ..., Fratiglioni L, Bäckman L PLoS ONE 10 (8) e0134766 2015-08-07 2015-08-07
Effect of a Bromo Substituent on the Glutathione Peroxidase Activity of a Pyridoxine-like Diselenide. Singh VP, Poon JF, ..., Ott MK, Engman L J. Org. Chem. 80 (15) 7385-7395 2015-08-07 2015-07-03
Comparative Proteomic Analysis of Human Liver Tissue and Isolated Hepatocytes with a Focus on Proteins Determining Drug Exposure. Vildhede A, Wiśniewski JR, ..., Karlgren M, Artursson P J. Proteome Res. 14 (8) 3305-3314 2015-08-07 2015-07-15
Comprehensive genomic profiles of small cell lung cancer. George J, Lim JS, ..., Sage J, Thomas RK Nature 524 (7563) 47-53 2015-08-06 2015-07-15
Crystal structure, biochemical and cellular activities demonstrate separate functions of MTH1 and MTH2. Carter M, Jemth AS, ..., Helleday T, Stenmark P Nat Commun 6 (-) 7871 2015-08-04 2015-08-04
Roux-en-Y Gastric Bypass and Vertical Banded Gastroplasty Induce Long-Term Changes on the Human Gut Microbiome Contributing to Fat Mass Regulation. Tremaroli V, Karlsson F, ..., Nielsen J, Bäckhed F Cell Metab. 22 (2) 228-238 2015-08-04 2015-08-06
MicroRNA-132 enhances transition from inflammation to proliferation during wound healing. Li D, Wang A, ..., Ståhle M, Landén NX J. Clin. Invest. 125 (8) 3008-3026 2015-08-03 2015-06-30
Genome-wide mapping of promoter-anchored interactions with close to single-enhancer resolution. Sahlén P, Abdullayev I, ..., Lundeberg J, Sandberg R Genome Biol. 16 (-) 156 2015-08-03 2015-08-03
Heat differentiated complement factor profiling. Hamsten C, Skattum L, ..., Nilsson P, Neiman M J Proteomics 126 (-) 155-162 2015-08-03 2015-06-07
Identifying and Assessing Interesting Subgroups in a Heterogeneous Population. Lee W, Alexeyenko A, ..., Lehtiö J, Pawitan Y Biomed Res Int 2015 (-) 462549 2015-08-03 2015-08-03
Analysis of the Human Prostate-Specific Proteome Defined by Transcriptomics and Antibody-Based Profiling Identifies TMEM79 and ACOXL as Two Putative, Diagnostic Markers in Prostate Cancer. O'Hurley G, Busch C, ..., Uhlén M, Pontén F PLoS ONE 10 (8) e0133449 2015-08-03 2015-08-03
Effect of genetic variations on ticagrelor plasma levels and clinical outcomes. Varenhorst C, Eriksson N, ..., Wallentin L, PLATO Investigators None Eur. Heart J. 36 (29) 1901-1912 2015-08-01 2015-05-04
Manganese lipoxygenase of F. oxysporum and the structural basis for biosynthesis of distinct 11-hydroperoxy stereoisomers. Wennman A, Magnuson A, Hamberg M, Oliw EH J. Lipid Res. 56 (8) 1606-1615 2015-08-00 2015-06-27
Representation of selected-reaction monitoring data in the mzQuantML data standard. Qi D, Lawless C, ..., Hubbard S, Jones AR Proteomics 15 (15) 2592-2596 2015-08-00 2015-04-18
Whole-exome sequencing of Ethiopian patients with ichthyosis vulgaris and atopic dermatitis. Taylan F, Nilsson D, ..., Nordenskjöld M, Bradley M J. Allergy Clin. Immunol. 136 (2) 507-9.e19 2015-08-00 2015-03-31
A prezygotic transmission distorter acting equally in female and male zebra finches Taeniopygia guttata. Knief U, Schielzeth H, ..., Kempenaers B, Forstmeier W Mol. Ecol. 24 (15) 3846-3859 2015-08-00 2015-06-20
Association of the LINGO2-related SNP rs10968576 with body mass in a cohort of elderly Swedes. Rask-Andersen M, Almén MS, Lind L, Schiöth HB Mol. Genet. Genomics 290 (4) 1485-1491 2015-08-00 2015-02-26
Inbreeding Affects Gene Expression Differently in Two Self-Incompatible Arabidopsis lyrata Populations with Similar Levels of Inbreeding Depression. Menzel M, Sletvold N, Ågren J, Hansson B Mol. Biol. Evol. 32 (8) 2036-2047 2015-08-00 2015-04-10
Prevalence of polymorphisms with significant resistance to NS5A inhibitors in treatment-naive patients with hepatitis C virus genotypes 1a and 3a in Sweden. Lindström I, Kjellin M, ..., Lannergard A, Lennerstrand J Infect Dis (Lond) 47 (8) 555-562 2015-08-00 2015-04-09
Bioinformatic Challenges in Clinical Diagnostic Application of Targeted Next Generation Sequencing: Experience from Pheochromocytoma. Crona J, Ljungström V, ..., Hellman P, Björklund P PLoS ONE 10 (7) e0133210 2015-07-31 2015-07-31
Identification of New Potential Interaction Partners for Human Cytoplasmic Copper Chaperone Atox1: Roles in Gene Regulation? Öhrvik H, Wittung-Stafshede P Int J Mol Sci 16 (8) 16728-16739 2015-07-23 2015-07-23
Directional dominance on stature and cognition in diverse human populations. Joshi PK, Esko T, ..., Polašek O, Wilson JF Nature 523 (7561) 459-462 2015-07-23 2015-07-02
Compaction of rolling circle amplification products increases signal integrity and signal-to-noise ratio. Clausson CM, Arngården L, ..., Wählby C, Söderberg O Sci Rep 5 (-) 12317 2015-07-23 2015-07-23
lobChIP: from cells to sequencing ready ChIP libraries in a single day. Wallerman O, Nord H, ..., Borghini L, Wadelius C Epigenetics Chromatin 8 (-) 25 2015-07-21 2015-07-21
Two new loci and gene sets related to sex determination and cancer progression are associated with susceptibility to testicular germ cell tumor. Kristiansen W, Karlsson R, ..., Grotmol T, Wiklund F Hum. Mol. Genet. 24 (14) 4138-4146 2015-07-15 2015-04-17
Predisposition to Childhood Otitis Media and Genetic Polymorphisms within the Toll-Like Receptor 4 (TLR4) Locus. Hafrén L, Einarsdottir E, ..., Kere J, Mattila PS PLoS ONE 10 (7) e0132551 2015-07-15 2015-07-15
Distinguishing Mast Cell Progenitors from Mature Mast Cells in Mice. Dahlin JS, Ding Z, Hallgren J Stem Cells Dev. 24 (14) 1703-1711 2015-07-15 2015-03-10
Evaluation of the protein biomarkers and the analgesic response to systemic methylene blue in patients with refractory neuropathic pain: a double-blind, controlled study. Miclescu AA, Svahn M, Gordh TE J Pain Res 8 (-) 387-397 2015-07-15 2015-07-15
Differential Expression Analysis by RNA-Seq Reveals Perturbations in the Platelet mRNA Transcriptome Triggered by Pathogen Reduction Systems. Osman A, Hitzler WE, Ameur A, Provost P PLoS ONE 10 (7) e0133070 2015-07-14 2015-07-14
Metagenomic insights into strategies of aerobic and anaerobic carbon and nitrogen transformation in boreal lakes. Peura S, Sinclair L, Bertilsson S, Eiler A Sci Rep 5 (-) 12102 2015-07-10 2015-07-10
SF3B1 mutation identifies a distinct subset of myelodysplastic syndrome with ring sideroblasts. Malcovati L, Karimi M, ..., Cazzola M, Hellström Lindberg E Blood 126 (2) 233-241 2015-07-09 2015-05-10
Cell periphery-related proteins as major genomic targets behind the adaptive evolution of an industrial Saccharomyces cerevisiae strain to combined heat and hydrolysate stress. Wallace-Salinas V, Brink DP, Ahrén D, Gorwa-Grauslund MF BMC Genomics 16 (-) 514 2015-07-09 2015-07-09
Identification of large variation in pfcrt, pfmdr-1 and pfubp-1 markers in Plasmodium falciparum isolates from Ethiopia and Tanzania. Golassa L, Kamugisha E, ..., Choy A, Swedberg G Malar. J. 14 (-) 264 2015-07-08 2015-07-08
Structural basis for cellobiose dehydrogenase action during oxidative cellulose degradation. Tan TC, Kracher D, ..., Ludwig R, Divne C Nat Commun 6 (-) 7542 2015-07-07 2015-07-07
Scaffolding of a bacterial genome using MinION nanopore sequencing. Karlsson E, Lärkeryd A, ..., Forsman M, Stenberg P Sci Rep 5 (-) 11996 2015-07-07 2015-07-07
Genome Characterization, Prevalence and Distribution of a Macula-Like Virus from Apis mellifera and Varroa destructor. de Miranda JR, Cornman RS, ..., Neumann P, Gauthier L Viruses 7 (7) 3586-3602 2015-07-06 2015-07-06
Foxf2 Is Required for Brain Pericyte Differentiation and Development and Maintenance of the Blood-Brain Barrier. Reyahi A, Nik AM, ..., Johansson BR, Carlsson P Dev. Cell 34 (1) 19-32 2015-07-06 2015-06-30
The TOPCONS web server for consensus prediction of membrane protein topology and signal peptides. Tsirigos KD, Peters C, ..., Käll L, Elofsson A Nucleic Acids Res. 43 (W1) W401-W407 2015-07-01 2015-05-15
Potential role of milk fat globule membrane in modulating plasma lipoproteins, gene expression, and cholesterol metabolism in humans: a randomized study. Rosqvist F, Smedman A, ..., Dahlman I, Risérus U Am. J. Clin. Nutr. 102 (1) 20-30 2015-07-00 2015-05-29
Polymorphisms in DCDC2 and S100B associate with developmental dyslexia. Matsson H, Huss M, ..., Peyrard-Janvid M, Kere J J. Hum. Genet. 60 (7) 399-401 2015-07-00 2015-04-17
HHEX_23 AA Genotype Exacerbates Effect of Diabetes on Dementia and Alzheimer Disease: A Population-Based Longitudinal Study. Xu WL, Pedersen NL, ..., Bäckman L, Fratiglioni L PLoS Med. 12 (7) e1001853 2015-07-00 2015-07-14
Using Genetic Variants to Assess the Relationship Between Circulating Lipids and Type 2 Diabetes. Fall T, Xie W, ..., Frayling TM, Ingelsson E Diabetes 64 (7) 2676-2684 2015-07-00 2015-05-08
UV irradiation responses in Giardia intestinalis. Einarsson E, Svärd SG, Troell K Exp. Parasitol. 154 (-) 25-32 2015-07-00 2015-04-01
Epigenetic activation of a cryptic TBC1D16 transcript enhances melanoma progression by targeting EGFR. Vizoso M, Ferreira HJ, ..., Marais R, Esteller M Nat. Med. 21 (7) 741-750 2015-07-00 2015-06-02
Discovery and Fine-Mapping of Glycaemic and Obesity-Related Trait Loci Using High-Density Imputation. Horikoshi M, Mӓgi R, ..., Morris AP, ENGAGE Consortium None PLoS Genet. 11 (7) e1005230 2015-07-00 2015-07-01
Function of Isolated Pancreatic Islets From Patients at Onset of Type 1 Diabetes: Insulin Secretion Can Be Restored After Some Days in a Nondiabetogenic Environment In Vitro: Results From the DiViD Study. Krogvold L, Skog O, ..., Korsgren O, Dahl-Jørgensen K Diabetes 64 (7) 2506-2512 2015-07-00 2015-02-14
Elevated Plasma Levels of MMP-12 Are Associated With Atherosclerotic Burden and Symptomatic Cardiovascular Disease in Subjects With Type 2 Diabetes. Goncalves I, Bengtsson E, ..., Nilsson J, SUMMIT Consortium None Arterioscler. Thromb. Vasc. Biol. 35 (7) 1723-1731 2015-07-00 2015-05-09
Genome-wide association study identifies new susceptibility loci for cutaneous lupus erythematosus. Kunz M, König IR, ..., Kuhn A, Ibrahim SM Exp. Dermatol. 24 (7) 510-515 2015-07-00 2015-04-02
Genome-wide association study of plasma levels of polychlorinated biphenyls disclose an association with the CYP2B6 gene in a population-based sample. Ng E, Salihovic S, ..., Morris AP, Lind L Environ. Res. 140 (-) 95-101 2015-07-00 2015-04-04
CTCF/cohesin-binding sites are frequently mutated in cancer. Katainen R, Dave K, ..., Taipale J, Aaltonen LA Nat. Genet. 47 (7) 818-821 2015-07-00 2015-06-09
Global Multilocus Sequence Type Analysis of Chlamydia trachomatis Strains from 16 Countries. Herrmann B, Isaksson J, ..., Gravningen K, Bruisten S J. Clin. Microbiol. 53 (7) 2172-2179 2015-07-00 2015-05-01
Proteomics for the detection of indirect markers of steroids treatment in bovine muscle. Stella R, Biancotto G, ..., Angeletti R, James P Proteomics 15 (13) 2332-2341 2015-07-00 2015-03-12
Detection of leukemia-associated mutations in peripheral blood DNA of hematologically normal elderly individuals. Score J, Chase A, ..., Gale RE, Cross NC Leukemia 29 (7) 1600-1602 2015-07-00 2015-01-30
Meta-analysis of Genome-wide Association Studies for Neuroticism, and the Polygenic Association With Major Depressive Disorder. Genetics of Personality Consortium None, de Moor MH, ..., Martin NG, Boomsma DI JAMA Psychiatry 72 (7) 642-650 2015-07-00 2015-05-21
Toward Rare Blood Cell Preservation for RNA Sequencing. Vickovic S, Ahmadian A, Lewensohn R, Lundeberg J J Mol Diagn 17 (4) 352-359 2015-07-00 2015-05-20
Identifying glycoside hydrolase family 18 genes in the mycoparasitic fungal species Clonostachys rosea. Tzelepis G, Dubey M, Jensen DF, Karlsson M Microbiology (Reading, Engl.) 161 (7) 1407-1419 2015-07-00 2015-04-18
Structural Basis for the Specificity of Human NUDT16 and Its Regulation by Inosine Monophosphate. Trésaugues L, Lundbäck T, ..., Gräslund S, Nordlund P PLoS ONE 10 (6) e0131507 2015-06-29 2015-06-29
Ebf1 heterozygosity results in increased DNA damage in pro-B cells and their synergistic transformation by Pax5 haploinsufficiency. Prasad MA, Ungerbäck J, ..., Hagman J, Sigvardsson M Blood 125 (26) 4052-4059 2015-06-25 2015-04-04
The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling. Lindskog C, Linné J, ..., Pontén F, Uhlén M BMC Genomics 16 (-) 475 2015-06-25 2015-06-25
Structure of the nuclease subunit of human mitochondrial RNase P. Reinhard L, Sridhara S, Hällberg BM Nucleic Acids Res. 43 (11) 5664-5672 2015-06-23 2015-05-09
The Plasmodiophora brassicae genome reveals insights in its life cycle and ancestry of chitin synthases. Schwelm A, Fogelqvist J, ..., Ludwig-Müller J, Dixelius C Sci Rep 5 (-) 11153 2015-06-18 2015-06-18
Dynamics of Cell Generation and Turnover in the Human Heart. Bergmann O, Zdunek S, ..., Druid H, Frisén J Cell 161 (7) 1566-1575 2015-06-18 2015-06-16
Confrontation of fibroblasts with cancer cells in vitro: gene network analysis of transcriptome changes and differential capacity to inhibit tumor growth. Alexeyenko A, Alkasalias T, ..., Guven H, Klein G J. Exp. Clin. Cancer Res. 34 (-) 62 2015-06-18 2015-06-18
Transglutaminase 4 as a prostate autoantigen in male subfertility. Landegren N, Sharon D, ..., Snyder M, Kämpe O Sci Transl Med 7 (292) 292ra101 2015-06-17 2015-06-19
Characterization of Three Mycobacterium spp. with Potential Use in Bioremediation by Genome Sequencing and Comparative Genomics. Das S, Pettersson BM, ..., Bhattacharya A, Kirsebom LA Genome Biol Evol 7 (7) 1871-1886 2015-06-16 2015-06-16
IFN-α production by plasmacytoid dendritic cell associations with polymorphisms in gene loci related to autoimmune and inflammatory diseases. Berggren O, Alexsson A, ..., Rönnblom L, Eloranta ML Hum. Mol. Genet. 24 (12) 3571-3581 2015-06-15 2015-03-18
Defining the Human Brain Proteome Using Transcriptomics and Antibody-Based Profiling with a Focus on the Cerebral Cortex. Sjöstedt E, Fagerberg L, ..., Uhlén M, Mulder J PLoS ONE 10 (6) e0130028 2015-06-15 2015-06-15
Whiteboard: a framework for the programmatic visualization of complex biological analyses. Sundström G, Zamani N, Grabherr MG, Mauceli E Bioinformatics 31 (12) 2054-2055 2015-06-15 2015-02-11
Phasing of single DNA molecules by massively parallel barcoding. Borgström E, Redin D, ..., Andersson AF, Ahmadian A Nat Commun 6 (-) 7173 2015-06-09 2015-06-09
Functional Identification of Target by Expression Proteomics (FITExP) reveals protein targets and highlights mechanisms of action of small molecule drugs. Chernobrovkin A, Marin-Vicente C, Visa N, Zubarev RA Sci Rep 5 (-) 11176 2015-06-08 2015-06-08
A quantitative assessment of the Hadoop framework for analyzing massively parallel DNA sequencing data. Siretskiy A, Sundqvist T, Voznesenskiy M, Spjuth O Gigascience 4 (-) 26 2015-06-04 2015-06-04
Evolutionary analysis of the female-specific avian W chromosome. Smeds L, Warmuth V, ..., Török J, Ellegren H Nat Commun 6 (-) 7330 2015-06-04 2015-06-04
Functional loss of IκBε leads to NF-κB deregulation in aggressive chronic lymphocytic leukemia. Mansouri L, Sutton LA, ..., Nilsson M, Rosenquist R J. Exp. Med. 212 (6) 833-843 2015-06-01 2015-05-20
Ancient wolf genome reveals an early divergence of domestic dog ancestors and admixture into high-latitude breeds. Skoglund P, Ersmark E, Palkopoulou E, Dalén L Curr. Biol. 25 (11) 1515-1519 2015-06-01 2015-05-26
Human adaptation to arsenic-rich environments. Schlebusch CM, Gattepaille LM, ..., Jakobsson M, Broberg K Mol. Biol. Evol. 32 (6) 1544-1555 2015-06-00 2015-03-06
Zebrafish: A possible tool to evaluate bioactive ions. Montazerolghaem M, Nyström L, Engqvist H, Karlsson Ott M Acta Biomater 19 (-) 10-14 2015-06-00 2015-03-17
NLRC4 Inflammasome Is an Important Regulator of Interleukin-18 Levels in Patients With Acute Coronary Syndromes: Genome-Wide Association Study in the PLATelet inhibition and patient Outcomes Trial (PLATO). Johansson Å, Eriksson N, ..., Siegbahn A, PLATO Investigators None Circ Cardiovasc Genet 8 (3) 498-506 2015-06-00 2015-03-10
Non-reciprocal Interspecies Hybridization Barriers in the Capsella Genus Are Established in the Endosperm. Rebernig CA, Lafon-Placette C, ..., Slotte T, Köhler C PLoS Genet. 11 (6) e1005295 2015-06-00 2015-06-18
Differential Gene Regulation in Fibroblasts in Co-culture with Keratinocytes and Head and Neck SCC Cells. Hakelius M, Saiepour D, ..., Gerdin B, Nowinski D Anticancer Res. 35 (6) 3253-3265 2015-06-00 2015-05-31
Effect of host plant and immune challenge on the levels of chemosensory and odorant-binding proteins in caterpillar salivary glands. Celorio-Mancera Mde L, Ytterberg AJ, ..., Janz N, Zubarev RA Insect Biochem. Mol. Biol. 61 (-) 34-45 2015-06-00 2015-05-03
Multiple Changes of Gene Expression and Function Reveal Genomic and Phenotypic Complexity in SLE-like Disease. Wilbe M, Kozyrev SV, ..., Hansson-Hamlin H, Lindblad-Toh K PLoS Genet. 11 (6) e1005248 2015-06-00 2015-06-09
Consequences of increased terrestrial dissolved organic matter and temperature on bacterioplankton community composition during a Baltic Sea mesocosm experiment. Lindh MV, Lefébure R, ..., Andersson A, Pinhassi J Ambio 44 Suppl 3 (-) 402-412 2015-06-00 2015-05-30
A nucleosome turnover map reveals that the stability of histone H4 Lys20 methylation depends on histone recycling in transcribed chromatin. Svensson JP, Shukla M, ..., Allshire RC, Ekwall K Genome Res. 25 (6) 872-883 2015-06-00 2015-03-18
High-throughput mutational screening adds clinically important information in myelodysplastic syndromes and secondary or therapy-related acute myeloid leukemia. Karimi M, Nilsson C, ..., Kere J, Hellström-Lindberg E Haematologica 100 (6) e223-e225 2015-06-00 2015-03-15
Whole-genome Linkage Analysis and Sequence Analysis of Candidate Loci in Familial Breast Cancer. Marikkannu R, Aravidis C, ..., Nilsson D, Lindblom A Anticancer Res. 35 (6) 3155-3165 2015-06-00 2015-05-31
Microbial metagenomics in the Baltic Sea: Recent advancements and prospects for environmental monitoring. Ininbergs K, Bergman B, Larsson J, Ekman M Ambio 44 Suppl 3 (-) 439-450 2015-06-00 2015-05-30
The impact of low-frequency and rare variants on lipid levels. Surakka I, Horikoshi M, ..., Ripatti S, ENGAGE Consortium None Nat. Genet. 47 (6) 589-597 2015-06-00 2015-05-12
Exome Sequencing and CNV Analysis on Chromosome 18 in Small Intestinal Neuroendocrine Tumors: Ruling Out a Suspect? Delgado Verdugo A, Crona J, ..., Westin G, Björklund P Horm. Metab. Res. 47 (6) 452-455 2015-06-00 2014-10-30
Hemophagocytic lymphohistiocytosis in 2 patients with underlying IFN-γ receptor deficiency. Tesi B, Sieni E, ..., Azzari C, Bryceson YT J. Allergy Clin. Immunol. 135 (6) 1638-1641 2015-06-00 2015-01-17
Exome sequencing of contralateral breast cancer identifies metastatic disease. Klevebring D, Lindberg J, ..., Sandberg M, Czene K Breast Cancer Res. Treat. 151 (2) 319-324 2015-06-00 2015-04-30
Circulating microRNA expression pattern separates patients with anti-neutrophil cytoplasmic antibody associated vasculitis from healthy controls. Skoglund C, Carlsen AL, ..., Heegaard NH, Segelmark M Clin. Exp. Rheumatol. 33 (2 Suppl 89) S-64-71 2015-05-26 2015-05-26
Phylogeny, evolution and classification of gall wasps: the plot thickens. Ronquist F, Nieves-Aldrey JL, ..., Liljeblad J, Nylander JA PLoS ONE 10 (5) e0123301 2015-05-20 2015-05-20
Complete genomes reveal signatures of demographic and genetic declines in the woolly mammoth. Palkopoulou E, Mallick S, ..., Reich D, Dalén L Curr. Biol. 25 (10) 1395-1400 2015-05-18 2015-04-29
CGGBP1 mitigates cytosine methylation at repetitive DNA sequences. Agarwal P, Collier P, ..., Westermark B, Singh U BMC Genomics 16 (-) 390 2015-05-16 2015-05-16
Complex archaea that bridge the gap between prokaryotes and eukaryotes. Spang A, Saw JH, ..., Guy L, Ettema TJ Nature 521 (7551) 173-179 2015-05-14 2015-05-07
Phylogeographical pattern of Francisella tularensis in a nationwide outbreak of tularaemia in Norway, 2011. Afset JE, Larssen KW, ..., Johansson A, Forsman M Euro Surveill. 20 (19) 9-14 2015-05-14 2015-05-14
Human genomics. Effect of predicted protein-truncating genetic variants on the human transcriptome. Rivas MA, Pirinen M, ..., Lappalainen T, MacArthur DG Science 348 (6235) 666-669 2015-05-08 2015-05-09
Complement inhibitor CD55 governs the integrity of membrane rafts in pancreatic beta cells, but plays no role in insulin secretion. Nagaraj V, King B, ..., Blom AM, Renström E Biochem. Biophys. Res. Commun. 460 (3) 518-524 2015-05-08 2015-03-24
Design, Synthesis and Inhibitory Activity of Photoswitchable RET Kinase Inhibitors. Ferreira R, Nilsson JR, ..., Andréasson J, Grøtli M Sci Rep 5 (-) 9769 2015-05-06 2015-05-06
Intestinal dysbiosis in children with short bowel syndrome is associated with impaired outcome. Engstrand Lilja H, Wefer H, ..., Finkel Y, Engstrand L Microbiome 3 (-) 18 2015-05-04 2015-05-04
Quantifying the impact of transporters on cellular drug permeability. Matsson P, Fenu LA, ..., Kansy M, Artursson P Trends Pharmacol. Sci. 36 (5) 255-262 2015-05-00 2015-03-24
Cooperative genetic changes in pediatric B-cell precursor acute lymphoblastic leukemia with deletions or mutations of IKZF1. Olsson L, Albitar F, ..., Paulsson K, Johansson B Genes Chromosomes Cancer 54 (5) 315-325 2015-05-00 2015-03-03
Genetic regulation of bone metabolism in the chicken: similarities and differences to Mammalian systems. Johnsson M, Jonsson KB, ..., Jensen P, Wright D PLoS Genet. 11 (5) e1005250 2015-05-00 2015-05-29
Genome-wide meta-analysis identifies six novel loci associated with habitual coffee consumption. Coffee and Caffeine Genetics Consortium None, Cornelis MC, ..., van Dam RM, Chasman DI Mol. Psychiatry 20 (5) 647-656 2015-05-00 2014-10-08
Mixed ancestry and admixture in Kauai's feral chickens: invasion of domestic genes into ancient Red Junglefowl reservoirs. Gering E, Johnsson M, ..., Getty T, Wright D Mol. Ecol. 24 (9) 2112-2124 2015-05-00 2015-02-07
Age- and sex-specific causal effects of adiposity on cardiovascular risk factors. Fall T, Hägg S, ..., Ingelsson E, ENGAGE Consortium None Diabetes 64 (5) 1841-1852 2015-05-00 2015-02-26
Tracking the origin of metastatic prostate cancer. Lindberg J, Kristiansen A, ..., Grönberg H, Egevad L Eur. Urol. 67 (5) 819-822 2015-05-00 2014-09-24
Diagnostic urinary proteome profile for immunoglobulin a nephropathy. Samavat S, Kalantari S, ..., Parvin M, Zubarev RA Iran J Kidney Dis 9 (3) 239-248 2015-05-00 2015-05-10
Autosomal recessive mutations in the COL2A1 gene cause severe spondyloepiphyseal dysplasia. Tham E, Nishimura G, ..., Nordenskjöld M, Grigelioniene G Clin. Genet. 87 (5) 496-498 2015-05-00 2014-07-26
Dietary fat quality impacts genome-wide DNA methylation patterns in a cross-sectional study of Greek preadolescents. Voisin S, Almén MS, ..., Manios Y, Schiöth HB Eur. J. Hum. Genet. 23 (5) 654-662 2015-05-00 2014-07-31
The role of genetic factors for hearing deterioration across 20 years: a twin study. Bogo R, Farah A, ..., Svartengren M, Skjönsberg Å J. Gerontol. A Biol. Sci. Med. Sci. 70 (5) 647-653 2015-05-00 2015-02-11
Plant-mediated gene silencing restricts growth of the potato late blight pathogen Phytophthora infestans. Jahan SN, Åsman AK, ..., Vetukuri RR, Dixelius C J. Exp. Bot. 66 (9) 2785-2794 2015-05-00 2015-03-20
Nanoparticle-stabilized microbubbles for multimodal imaging and drug delivery. Mørch Ý, Hansen R, ..., de Lange Davies C, Stenstad PM Contrast Media Mol Imaging 10 (5) 356-366 2015-04-30 2015-04-30
Deep sequencing and SNP array analyses of pediatric T-cell acute lymphoblastic leukemia reveal NOTCH1 mutations in minor subclones and a high incidence of uniparental isodisomies affecting CDKN2A. Karrman K, Castor A, ..., Paulsson K, Johansson B J Hematol Oncol 8 (-) 42 2015-04-24 2015-04-24
Genetically determined height and coronary artery disease. Nelson CP, Hamby SE, ..., Samani NJ, CARDIoGRAM+C4D Consortium None N. Engl. J. Med. 372 (17) 1608-1618 2015-04-23 2015-04-09
Circulating carnosine dipeptidase 1 associates with weight loss and poor prognosis in gastrointestinal cancer. Arner P, Henjes F, ..., Nilsson P, Rydén M PLoS ONE 10 (4) e0123566 2015-04-21 2015-04-21
Polymorphisms in chloroquine resistance-associated genes in Plasmodium vivax in Ethiopia. Golassa L, Erko B, ..., Aseffa A, Swedberg G Malar. J. 14 (-) 164 2015-04-16 2015-04-16
AP-1-mediated chromatin looping regulates ZEB2 transcription: new insights into TNFα-induced epithelial-mesenchymal transition in triple-negative breast cancer. Qiao Y, Shiue CN, ..., Zhao C, Dahlman-Wright K Oncotarget 6 (10) 7804-7814 2015-04-10 2015-03-13
Common genetic variants influence human subcortical brain structures. Hibar DP, Stein JL, ..., Thompson PM, Medland SE Nature 520 (7546) 224-229 2015-04-09 2015-01-22
Inter-relationships between the metrics of instrumental meat color and microbial growth during aerobic storage of beef at 4°C Li S, Zamaratskaia G, ..., Borch E, Johansson M Acta Agriculturae Scandinavica, Section A - Animal Science 65 (2) 97-106 2015-04-03 2015-09-00
Transplant experiments uncover Baltic Sea basin-specific responses in bacterioplankton community composition and metabolic activities. Lindh MV, Figueroa D, ..., Legrand C, Pinhassi J Front Microbiol 6 (-) 223 2015-04-01 2015-04-01
A prognosis based classification of undifferentiated uterine sarcomas: identification of mitotic index, hormone receptors and YWHAE-FAM22 translocation status as predictors of survival. Gremel G, Liew M, ..., Pontén F, Carlson JW Int. J. Cancer 136 (7) 1608-1618 2015-04-01 2014-08-19
Is label-free LC-MS/MS ready for biomarker discovery? Sandin M, Chawade A, Levander F Proteomics Clin Appl 9 (3-4) 289-294 2015-04-00 2015-02-07
Adiposity as a cause of cardiovascular disease: a Mendelian randomization study. Hägg S, Fall T, ..., Ingelsson E, European Network for Genetic and Genomic Epidemiology Consortium None Int J Epidemiol 44 (2) 578-586 2015-04-00 2015-05-27
Using genetics to test the causal relationship of total adiposity and periodontitis: Mendelian randomization analyses in the Gene-Lifestyle Interactions and Dental Endpoints (GLIDE) Consortium. Shungin D, Cornelis MC, ..., Johansson I, Franks PW Int J Epidemiol 44 (2) 638-650 2015-04-00 2015-06-06
GWAS-identified loci for coronary heart disease are associated with intima-media thickness and plaque presence at the carotid artery bulb. den Hoed M, Strawbridge RJ, ..., Melander O, Lind L Atherosclerosis 239 (2) 304-310 2015-04-00 2015-02-16
Mixture effects of levonorgestrel and ethinylestradiol: estrogenic biomarkers and hormone receptor mRNA expression during sexual programming. Säfholm M, Jansson E, Fick J, Berg C Aquat. Toxicol. 161 (-) 146-153 2015-04-00 2015-02-24
Birth weight as an independent predictor of ADHD symptoms: a within-twin pair analysis. Pettersson E, Sjölander A, ..., Lichtenstein P, Larsson H J Child Psychol Psychiatry 56 (4) 453-459 2015-04-00 2014-07-22
Fluctuating expression of microRNAs in adenovirus infected cells. Zhao H, Chen M, Tellgren-Roth C, Pettersson U Virology 478 (-) 99-111 2015-04-00 2015-03-07
Functional anti-CD94/NKG2A and anti-CD94/NKG2C autoantibodies in patients with systemic lupus erythematosus. Hagberg N, Theorell J, ..., Bryceson YT, Rönnblom L Arthritis & rheumatology (Hoboken, N.J.) 67 (4) 1000-1011 2015-04-00 2014-12-17
Oseltamivir-resistant influenza A (H1N1) virus strain with an H274Y mutation in neuraminidase persists without drug pressure in infected mallards. Gillman A, Muradrasoli S, ..., Olsen B, Järhult JD Appl. Environ. Microbiol. 81 (7) 2378-2383 2015-04-00 2015-01-27
Methylation levels of SLC23A2 and NCOR2 genes correlate with spinal muscular atrophy severity. Zheleznyakova GY, Nilsson EK, ..., Baranov VS, Schiöth HB PLoS ONE 10 (3) e0121964 2015-03-30 2015-03-30
Site-specific programming of the host epithelial transcriptome by the gut microbiota. Sommer F, Nookaew I, ..., Fogelstrand P, Bäckhed F Genome Biol. 16 (-) 62 2015-03-28 2015-03-28
Age-associated DNA methylation changes in immune genes, histone modifiers and chromatin remodeling factors within 5 years after birth in human blood leukocytes. Acevedo N, Reinius LE, ..., Greco D, Kere J Clin Epigenetics 7 (-) 34 2015-03-26 2015-03-26
Crystal structures of the kinase domain of the sulfate-activating complex in Mycobacterium tuberculosis. Poyraz Ö, Brunner K, ..., Schnell R, Schneider G PLoS ONE 10 (3) e0121494 2015-03-25 2015-03-25
Discovery of molecular markers to discriminate corneal endothelial cells in the human body. Yoshihara M, Ohmiya H, ..., Tsujikawa M, Nishida K PLoS ONE 10 (3) e0117581 2015-03-25 2015-03-25
Complete genome sequence of Borrelia afzelii K78 and comparative genome analysis. Schüler W, Bunikis I, ..., Bergström S, Lundberg U PLoS ONE 10 (3) e0120548 2015-03-23 2015-03-23
Structural basis for lack of ADP-ribosyltransferase activity in poly(ADP-ribose) polymerase-13/zinc finger antiviral protein. Karlberg T, Klepsch M, ..., Linusson A, Schüler H J. Biol. Chem. 290 (12) 7336-7344 2015-03-20 2015-01-31
Complete Genome Sequence of Francisella guangzhouensis Strain 08HL01032T, Isolated from Air-Conditioning Systems in China. Svensson D, Öhrman C, ..., Forsman M, Sjödin A Genome Announc 3 (2) - 2015-03-19 2015-03-19
Comparative proteomic analysis of hyphae and germinating cysts of Phytophthora pisi and Phytophthora sojae. Hosseini S, Resjö S, ..., Andreasson E, Karlsson M J Proteomics 117 (-) 24-40 2015-03-18 2015-01-24
Conservation of transcription factor binding specificities across 600 million years of bilateria evolution. Nitta KR, Jolma A, ..., Furlong EE, Taipale J Elife 4 (-) - 2015-03-17 2015-03-17
Local hopping mobile DNA implicated in pseudogene formation and reductive evolution in an obligate cyanobacteria-plant symbiosis. Vigil-Stenman T, Larsson J, Nylander JA, Bergman B BMC Genomics 16 (-) 193 2015-03-17 2015-03-17
SLC10A4 is a vesicular amine-associated transporter modulating dopamine homeostasis. Larhammar M, Patra K, ..., Wallén-Mackenzie Å, Kullander K Biol. Psychiatry 77 (6) 526-536 2015-03-15 2014-09-02
Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer. Birgisson H, Edlund K, ..., Glimelius B, Sundström M BMC Cancer 15 (-) 125 2015-03-14 2015-03-14
Variations of gastric corpus microbiota are associated with early esophageal squamous cell carcinoma and squamous dysplasia. Nasrollahzadeh D, Malekzadeh R, ..., Dawsey SM, Ye W Sci Rep 5 (-) 8820 2015-03-06 2015-03-06
Hybrid origins and the earliest stages of diploidization in the highly successful recent polyploid Capsella bursa-pastoris. Douglas GM, Gos G, ..., Slotte T, Wright SI Proc. Natl. Acad. Sci. U.S.A. 112 (9) 2806-2811 2015-03-03 2015-02-19
Genomewide association study of body weight traits in Baluchi sheep. Gholizadeh M, Rahimi-Mianji G, Nejati-Javaremi A J. Genet. 94 (1) 143-146 2015-03-00 2015-04-08
Targeted next-generation sequencing in chronic lymphocytic leukemia: a high-throughput yet tailored approach will facilitate implementation in a clinical setting. Sutton LA, Ljungström V, ..., Stamatopoulos K, Rosenquist R Haematologica 100 (3) 370-376 2015-03-00 2014-12-07
MuSK: a new target for lethal fetal akinesia deformation sequence (FADS). Wilbe M, Ekvall S, ..., Annerén G, Bondeson ML J. Med. Genet. 52 (3) 195-202 2015-03-00 2015-01-24
High-resolution crystal structure of a polyextreme GH43 glycosidase from Halothermothrix orenii with α-L-arabinofuranosidase activity. Hassan N, Kori LD, ..., Divne C, Tan TC Acta Crystallogr F Struct Biol Commun 71 (Pt 3) 338-345 2015-03-00 2015-02-19
Evaluation of human papillomavirus DNA detection in samples obtained for routine Chlamydia trachomatis screening. Söderlund-Strand A, Wikström A, Dillner J J. Clin. Virol. 64 (-) 88-91 2015-03-00 2015-01-13
Amplification-free sequencing of cell-free DNA for prenatal non-invasive diagnosis of chromosomal aberrations. Karlsson K, Sahlin E, ..., Nordenskjöld M, Linnarsson S Genomics 105 (3) 150-158 2015-03-00 2014-12-30
A genomic duplication is associated with ectopic eomesodermin expression in the embryonic chicken comb and two duplex-comb phenotypes. Dorshorst B, Harun-Or-Rashid M, ..., Hallböök F, Andersson L PLoS Genet. 11 (3) e1004947 2015-03-00 2015-03-19
The Fun30 chromatin remodeler Fft3 controls nuclear organization and chromatin structure of insulators and subtelomeres in fission yeast. Steglich B, Strålfors A, ..., Javerzat JP, Ekwall K PLoS Genet. 11 (3) e1005101 2015-03-00 2015-03-23
The H1-receptor antagonist cetirizine ameliorates high-fat diet-induced glucose intolerance in male C57BL/6 mice, but not diabetes outcome in female non-obese diabetic (NOD) mice. Anvari E, Wang X, Sandler S, Welsh N Ups. J. Med. Sci. 120 (1) 40-46 2015-03-00 2014-10-08
Structural characterization of substrate and inhibitor binding to farnesyl pyrophosphate synthase from Pseudomonas aeruginosa. Schmidberger JW, Schnell R, Schneider G Acta Crystallogr. D Biol. Crystallogr. 71 (Pt 3) 721-731 2015-03-00 2015-02-26
Effects of ecological engineered oxygenation on the bacterial community structure in an anoxic fjord in western Sweden. Forth M, Liljebladh B, ..., Hall PO, Treusch AH ISME J 9 (3) 656-669 2015-03-00 2014-09-23
Preclinical characterization of acyl sulfonimidamides: potential carboxylic acid bioisosteres with tunable properties. Borhade SR, Svensson R, ..., Arvidsson PI, Sandström A ChemMedChem 10 (3) 455-460 2015-03-00 2015-01-30
FGF2 as a potential prognostic biomarker for proneural glioma patients. Sooman L, Freyhult E, ..., Bergqvist M, Ekman S Acta Oncol 54 (3) 385-394 2015-03-00 2014-09-30
MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics. Kushwaha SK, Manoharan L, ..., Hedlund K, Ahrén D BMC Bioinformatics 16 (-) 65 2015-02-28 2015-02-28
Roux-en Y gastric bypass surgery induces genome-wide promoter-specific changes in DNA methylation in whole blood of obese patients. Nilsson EK, Ernst B, ..., Schultes B, Schiöth HB PLoS ONE 10 (2) e0115186 2015-02-24 2015-02-24
The roles of SNF2/SWI2 nucleosome remodeling enzymes in blood cell differentiation and leukemia. Prasad P, Lennartsson A, Ekwall K Biomed Res Int 2015 (-) 347571 2015-02-19 2015-02-19
Evolution of Darwin's finches and their beaks revealed by genome sequencing. Lamichhaney S, Berglund J, ..., Webster MT, Andersson L Nature 518 (7539) 371-375 2015-02-19 2015-02-18
DNA methylation-based subtype prediction for pediatric acute lymphoblastic leukemia. Nordlund J, Bäcklin CL, ..., Forestier E, Syvänen AC Clin Epigenetics 7 (-) 11 2015-02-17 2015-02-17
Genetic studies of body mass index yield new insights for obesity biology. Locke AE, Kahali B, ..., Loos RJ, Speliotes EK Nature 518 (7538) 197-206 2015-02-12 2015-02-13
Clonal distribution of BCR-ABL1 mutations and splice isoforms by single-molecule long-read RNA sequencing. Cavelier L, Ameur A, ..., Olsson-Strömberg U, Hermanson M BMC Cancer 15 (-) 45 2015-02-12 2015-02-12
New genetic loci link adipose and insulin biology to body fat distribution. Shungin D, Winkler TW, ..., Lindgren CM, Mohlke KL Nature 518 (7538) 187-196 2015-02-12 2015-02-13
Data processing has major impact on the outcome of quantitative label-free LC-MS analysis. Chawade A, Sandin M, ..., Malmström J, Levander F J. Proteome Res. 14 (2) 676-687 2015-02-06 2014-11-20
Microbial community composition and diversity via 16S rRNA gene amplicons: evaluating the illumina platform. Sinclair L, Osman OA, Bertilsson S, Eiler A PLoS ONE 10 (2) e0116955 2015-02-03 2015-02-03
Risk of childhood asthma is associated with CpG-site polymorphisms, regional DNA methylation and mRNA levels at the GSDMB/ORMDL3 locus. Acevedo N, Reinius LE, ..., Kere J, Söderhäll C Hum. Mol. Genet. 24 (3) 875-890 2015-02-01 2014-09-27
The GH receptor exon 3 deleted/full-length polymorphism is associated with central adiposity in the general population. Glad CA, Carlsson LM, ..., Svensson PA, Johannsson G Eur. J. Endocrinol. 172 (2) 123-128 2015-02-00 2014-11-14
Novel high-throughput screening method for identification of fungal dimorphism blockers. Stylianou M, Uvell H, ..., Elofsson M, Urban CF J Biomol Screen 20 (2) 285-291 2015-02-00 2014-10-05
Transcriptional responses of the bacterial antagonist Serratia plymuthica to the fungal phytopathogen Rhizoctonia solani. Neupane S, Finlay RD, ..., Elfstrand M, Högberg N Environ Microbiol Rep 7 (1) 123-127 2015-02-00 2014-08-21
Environmental and genetic factors in the development of anticitrullinated protein antibodies (ACPAs) and ACPA-positive rheumatoid arthritis: an epidemiological investigation in twins. Hensvold AH, Magnusson PK, ..., Klareskog L, Catrina AI Ann. Rheum. Dis. 74 (2) 375-380 2015-02-00 2013-11-28
Biochemical and structural characterization of a thermostable β-glucosidase from Halothermothrix orenii for galacto-oligosaccharide synthesis. Hassan N, Nguyen TH, ..., Divne C, Tan TC Appl. Microbiol. Biotechnol. 99 (4) 1731-1744 2015-02-00 2014-09-01
Proposal of Thorsellia kenyensis sp. nov. and Thorsellia kandunguensis sp. nov., isolated from larvae of Anopheles arabiensis, as members of the family Thorselliaceae fam. nov. Kämpfer P, Glaeser SP, ..., Busse HJ, Terenius O Int. J. Syst. Evol. Microbiol. 65 (Pt 2) 444-451 2015-02-00 2014-11-12
Genome and physiology of the ascomycete filamentous fungus Xeromyces bisporus, the most xerophilic organism isolated to date. Leong SL, Lantz H, ..., Tellgren-Roth C, Schnürer J Environ. Microbiol. 17 (2) 496-513 2015-02-00 2014-08-22
CTNND2-a candidate gene for reading problems and mild intellectual disability. Hofmeister W, Nilsson D, ..., Syk Lundberg E, Lindstrand A J. Med. Genet. 52 (2) 111-122 2015-02-00 2014-12-05
Expression of human skin-specific genes defined by transcriptomics and antibody-based profiling. Edqvist PH, Fagerberg L, ..., Uhlén M, Pontén F J. Histochem. Cytochem. 63 (2) 129-141 2015-02-00 2014-11-21
Multi-omic data analysis using Galaxy. Boekel J, Chilton JM, ..., Moerland PD, Griffin TJ Nat. Biotechnol. 33 (2) 137-139 2015-02-00 2015-02-07
Associations between the 17q21 region and allergic rhinitis in 5 birth cohorts. Fuertes E, Söderhäll C, ..., Carlsten C, Melén E J. Allergy Clin. Immunol. 135 (2) 573-576 2015-02-00 2014-09-30
Predicting venous thrombosis in women using a combination of genetic markers and clinical risk factors. Bruzelius M, Bottai M, ..., Hamsten A, Odeberg J J. Thromb. Haemost. 13 (2) 219-227 2015-02-00 2014-12-05
The composition of the gut microbiota shapes the colon mucus barrier. Jakobsson HE, Rodríguez-Piñeiro AM, ..., Hansson GC, Johansson ME EMBO Rep. 16 (2) 164-177 2015-02-00 2014-12-20
Prognostic impact of COX-2 in non-small cell lung cancer: a comprehensive compartment-specific evaluation of tumor and stromal cell expression. Mattsson JS, Bergman B, ..., Micke P, Gulyas M Cancer Lett. 356 (2 Pt B) 837-845 2015-01-28 2014-12-03
Endonuclease specificity and sequence dependence of type IIS restriction enzymes. Lundin S, Jemt A, ..., Lexow P, Lundeberg J PLoS ONE 10 (1) e0117059 2015-01-28 2015-01-28
Next-generation sequencing reveals low-dose effects of cationic dendrimers in primary human bronchial epithelial cells. Feliu N, Kohonen P, ..., Nyström A, Fadeel B ACS Nano 9 (1) 146-163 2015-01-27 2014-12-23
Intratumoral genome diversity parallels progression and predicts outcome in pediatric cancer. Mengelbier LH, Karlsson J, ..., Mayrhofer M, Gisselsson D Nat Commun 6 (-) 6125 2015-01-27 2015-01-27
TGF-β1-Induced Epithelial-Mesenchymal Transition Promotes Monocyte/Macrophage Properties in Breast Cancer Cells. Johansson J, Tabor V, ..., Jalkanen S, Fuxe J Front Oncol 5 (-) 3 2015-01-26 2015-01-26
Proteomics. Tissue-based map of the human proteome. Uhlén M, Fagerberg L, ..., Nielsen J, Pontén F Science 347 (6220) 1260419 2015-01-23 2015-01-24
Drug-induced mRNA signatures are enriched for the minority of genes that are highly heritable. Gao T, Brodin P, Davis MM, Jojic V Pac Symp Biocomput - (-) 395-406 2015-01-17 2015-01-17
Variation in the human immune system is largely driven by non-heritable influences. Brodin P, Jojic V, ..., Maecker HT, Davis MM Cell 160 (1-2) 37-47 2015-01-15 2015-01-17
Transcription-coupled recruitment of human CHD1 and CHD2 influences chromatin accessibility and histone H3 and H3.3 occupancy at active chromatin regions. Siggens L, Cordeddu L, ..., Lennartsson A, Ekwall K Epigenetics Chromatin 8 (1) 4 2015-01-15 2015-01-15
The statistical geometry of transcriptome divergence in cell-type evolution and cancer. Liang C, FANTOM Consortium None, Forrest AR, Wagner GP Nat Commun 6 (-) 6066 2015-01-14 2015-01-14
Comparison of heritability of Cystatin C- and creatinine-based estimates of kidney function and their relation to heritability of cardiovascular disease. Arpegård J, Viktorin A, ..., Magnusson PK, Svensson P J Am Heart Assoc 4 (1) e001467 2015-01-14 2015-01-14
Defects of CRB2 cause steroid-resistant nephrotic syndrome. Ebarasi L, Ashraf S, ..., Hildebrandt F, Majumdar A Am. J. Hum. Genet. 96 (1) 153-161 2015-01-08 2015-01-06
Insights on the evolution of mycoparasitism from the genome of Clonostachys rosea. Karlsson M, Durling MB, ..., Lee YH, Jensen DF Genome Biol Evol 7 (2) 465-480 2015-01-08 2015-01-08
The higher frequency of IgA deficiency among Swedish twins is not explained by HLA haplotypes. Frankowiack M, Kovanen RM, ..., Pedersen NL, Hammarström L Genes Immun. 16 (3) 199-205 2015-01-08 2015-01-08
A secretagogin locus of the mammalian hypothalamus controls stress hormone release. Romanov RA, Alpár A, ..., Hökfelt T, Harkany T EMBO J. 34 (1) 36-54 2015-01-02 2014-11-29
Mutagenesis. Smoking is associated with mosaic loss of chromosome Y. Dumanski JP, Rasi C, ..., Ingelsson E, Forsberg LA Science 347 (6217) 81-83 2015-01-02 2014-12-06
Scavenging effect of Trolox released from brushite cements. Mestres G, Santos CF, ..., Persson C, Ott MK Acta Biomater 11 (-) 459-466 2015-01-00 2014-09-18
Body composition and bone mineral density in women with Cushing's syndrome in remission and the association with common genetic variants influencing glucocorticoid sensitivity. Ragnarsson O, Glad CA, ..., Wängberg B, Johannsson G Eur. J. Endocrinol. 172 (1) 1-10 2015-01-00 2014-11-26
Expression of human leukocyte antigen class I in endocrine and exocrine pancreatic tissue at onset of type 1 diabetes. Skog O, Korsgren S, ..., Korsgren O, Dahl-Jørgensen K Am. J. Pathol. 185 (1) 129-138 2015-01-00 2014-12-20
Identification and functional characterization of G6PC2 coding variants influencing glycemic traits define an effector transcript at the G6PC2-ABCB11 locus. Mahajan A, Sim X, ..., Gloyn AL, T2D-GENES consortium and GoT2D consortium None PLoS Genet. 11 (1) e1004876 2015-01-00 2015-01-27
Phenotypic plasticity and differentiation in an invasive freshwater microalga Sassenhagen I, Wilken S, Godhe A, Rengefors K Harmful Algae 41 (-) 38-45 2015-01-00 2015-01-00
Reprogramming of Yersinia from virulent to persistent mode revealed by complex in vivo RNA-seq analysis. Avican K, Fahlgren A, ..., Dersch P, Fällman M PLoS Pathog. 11 (1) e1004600 2015-01-00 2015-01-15
Lessons and implications from association studies and post-GWAS analyses of cervical cancer. Chen D, Gyllensten U Trends Genet. 31 (1) 41-54 2015-01-00 2014-12-04
The Biobanking Analysis Resource Catalogue (BARCdb): a new research tool for the analysis of biobank samples. Galli J, Oelrich J, ..., Ortega-Paino E, Landegren U Nucleic Acids Res. 43 (Database issue) D1158-D1162 2015-01-00 2014-10-23
The human gastrointestinal tract-specific transcriptome and proteome as defined by RNA sequencing and antibody-based profiling. Gremel G, Wanders A, ..., Uhlén M, Pontén F J. Gastroenterol. 50 (1) 46-57 2015-01-00 2014-05-03
High plasma levels of heparin-binding epidermal growth factor are associated with a more stable plaque phenotype and reduced incidence of coronary events. Rattik S, Wigren M, ..., Gonçalves I, Nilsson J Arterioscler. Thromb. Vasc. Biol. 35 (1) 222-228 2015-01-00 2014-11-02
Methylated RASSF1A in malignant peripheral nerve sheath tumors identifies neurofibromatosis type 1 patients with inferior prognosis. Danielsen SA, Lind GE, ..., Picci P, Lothe RA Neuro-oncology 17 (1) 63-69 2015-01-00 2014-07-20
A Machine Learning Approach to Explain Drug Selectivity to Soluble and Membrane Protein Targets. Freyhult E, Gustafsson MG, Strömbergsson H Mol Inform 34 (1) 44-52 2015-01-00 2015-01-08
Healthy Nordic diet downregulates the expression of genes involved in inflammation in subcutaneous adipose tissue in individuals with features of the metabolic syndrome. Kolehmainen M, Ulven SM, ..., Arner P, Dahlman I Am. J. Clin. Nutr. 101 (1) 228-239 2015-01-00 2014-12-21
The mutational landscape in pediatric acute lymphoblastic leukemia deciphered by whole genome sequencing. Lindqvist CM, Nordlund J, ..., Syvänen AC, Berglund EC Hum. Mutat. 36 (1) 118-128 2015-01-00 2014-10-31
Anti-Obesity Effects and Metabolism in DIO Mice of a Novel Hybrid Lipid with Lauric and Lipoic Acid Madawala SR, Manubolu M, ..., Malmlöf K, Dutta PC J Obes Weight Loss Ther 05 (02) - 2015-00-00 2015-00-00
Cytotoxicity, in Vivo Skin Irritation and Acute Systemic Toxicity of the Mesoporous Magnesium Carbonate Upsalite Frykstrand S, Forsgren J, ..., Strømme M, Ferraz N JBNB 06 (04) 257-266 2015-00-00 2015-00-00
Assessing the Barley Genome Zipper and Genomic Resources for Breeding Purposes Silvar C, Martis MM, ..., Ordon F, Perovic D Plant Genome 8 (3) 0 2015-00-00 2015-00-00