Stadler C

Spatial profiling of the mouse colonic immune landscape associated with colitis and sex.

Holm M, Stepanauskaitė L, Bäckström A, ..., Stadler C, Williams C

Commun Biol 7 (1) 1595 [2024-11-29; online 2024-11-29] Open Access

Affinity Proteomics Stockholm [Service] Spatial Proteomics [Collaborative]

Making Multiplexed Imaging Flexible: Combining Essential Markers With Established Antibody Panels.

Deen AJ, Thorsson J, O'Roberts EM, ..., Oses C, Stadler C

J. Histochem. Cytochem. 72 (8-9) 517-544 [2024-08-31; online 2024-08-31]

BioImage Informatics [Service] Bioinformatics (NBIS) [Service] Spatial Proteomics [Technology development]

N-terminal proteoforms may engage in different protein complexes.

Bogaert A, Fijalkowska D, Staes A, ..., Calderwood MA, Gevaert K

Life Sci. Alliance 6 (8) - [2023-08-00; online 2023-06-14]

Spatial Proteomics [Collaborative]

DOI Crossref

Subcellular mapping of the protein landscape of SARS-CoV-2 infected cells for target-centric drug repurposing

Kaimal JM, Tampere M, Le TH, ..., Östling P, Stadler C

- - (-) - [2022-03-29; online 2022-03-29]

Subcellular proteomics.

Christopher JA, Stadler C, Martin CE, ..., Emili A, Lilley KS

Nat Rev Methods Primers 1 (1) - [2021-04-29; online 2021-04-29]

Spatiotemporal dissection of the cell cycle with single-cell proteogenomics.

Mahdessian D, Cesnik AJ, Gnann C, ..., Sullivan DP, Lundberg E

Nature 590 (7847) 649-654 [2021-02-00; online 2021-02-24]

Eukaryotic Single Cell Genomics (ESCG) [Service] NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) National Genomics Infrastructure Spatial Proteomics [Collaborative]

A Sample Preparation Protocol for High Throughput Immunofluorescence of Suspension Cells on an Adherent Surface.

Bäckström A, Kugel L, Gnann C, ..., Lundberg E, Stadler C

J. Histochem. Cytochem. 68 (7) 473-489 [2020-07-00; online 2020-06-20]

Affinity Proteomics Stockholm [Collaborative] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service] Spatial Proteomics [Collaborative]

The human secretome

Uhlén M, Karlsson MJ, Hober A, ..., Fagerberg L, Sivertsson Å

Sci. Signal. 12 (609) eaaz0274 [2019-11-26; online 2019-11-26]

TcellSubC: An Atlas of the Subcellular Proteome of Human T Cells.

Joshi RN, Stadler C, Lehmann R, ..., Schmidt A, Vesterlund M

Front Immunol 10 (-) 2708 [2019-11-26; online 2019-11-26]

Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service] Global Proteomics and Proteogenomics [Technology development] Spatial Proteomics [Collaborative]

A subcellular map of the human proteome.

Thul PJ, Åkesson L, Wiking M, ..., Uhlén M, Lundberg E

Science 356 (6340) - [2017-05-26; online 2017-05-11]

Bioinformatics Support for Computational Resources [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service] Spatial Proteomics [Collaborative]

Antibody Validation in Bioimaging Applications Based on Endogenous Expression of Tagged Proteins.

Skogs M, Stadler C, Schutten R, ..., Uhlén M, Lundberg E

J. Proteome Res. 16 (1) 147-155 [2017-01-06; online 2016-10-12]

Analysis of the Human Prostate-Specific Proteome Defined by Transcriptomics and Antibody-Based Profiling Identifies TMEM79 and ACOXL as Two Putative, Diagnostic Markers in Prostate Cancer.

O'Hurley G, Busch C, Fagerberg L, ..., Uhlén M, Pontén F

PLoS ONE 10 (8) e0133449 [2015-08-03; online 2015-08-03]

Affinity Proteomics Stockholm NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) National Genomics Infrastructure Spatial Proteomics Tissue Profiling [Technology development]

RNA- and antibody-based profiling of the human proteome with focus on chromosome 19.

Stadler C, Fagerberg L, Sivertsson Å, ..., Lundberg E, Uhlén M

J. Proteome Res. 13 (4) 2019-2027 [2014-04-04; online 2014-03-04]

NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) National Genomics Infrastructure Spatial Proteomics

Immunofluorescence and fluorescent-protein tagging show high correlation for protein localization in mammalian cells.

Stadler C, Rexhepaj E, Singan VR, ..., Simpson JC, Lundberg E

Nat. Methods 10 (4) 315-323 [2013-04-00; online 2013-02-26]

RNA deep sequencing as a tool for selection of cell lines for systematic subcellular localization of all human proteins.

Danielsson F, Wiking M, Mahdessian D, ..., Uhlén M, Lundberg E

J. Proteome Res. 12 (1) 299-307 [2013-01-04; online 2012-12-12]

Systematic validation of antibody binding and protein subcellular localization using siRNA and confocal microscopy.

Stadler C, Hjelmare M, Neumann B, ..., Uhlén M, Lundberg E

J Proteomics 75 (7) 2236-2251 [2012-04-03; online 2012-03-01]

Generation of monospecific antibodies based on affinity capture of polyclonal antibodies.

Hjelm B, Forsström B, Igel U, ..., Johansson C, Uhlén M

Protein Sci. 20 (11) 1824-1835 [2011-11-00; online 2011-09-08]

Affinity Proteomics Stockholm [Technology development] Autoimmunity and Serology Profiling [Technology development] Spatial Proteomics

Mapping the subcellular protein distribution in three human cell lines.

Fagerberg L, Stadler C, Skogs M, ..., Uhlén M, Lundberg E

J. Proteome Res. 10 (8) 3766-3777 [2011-08-05; online 2011-06-17]

A single fixation protocol for proteome-wide immunofluorescence localization studies.

Stadler C, Skogs M, Brismar H, Uhlén M, Lundberg E

J Proteomics 73 (6) 1067-1078 [2010-04-18; online 2009-11-10]