Clinical Genomics Linköping (16 publications)

Publications

SciLifeLab Infrastructure Unit Since 2019.

Primary: Shown in the list of current labels, if end date is not specified.

Started: 2019

Ended: Current

Year 2021

Increased diagnostic sensitivity of palpation-guided thyroid nodule fine-needle aspiration cytology by BRAF V600E-mutation analysis.

Gimm O, Ivansson K, Beka E, ..., Garvin S, Söderkvist P

J Pathol Clin Res 7 (6) 556-564 [2021-11-00; online 2021-06-22]

Clinical Genomics Linköping [Collaborative]

PubMed DOI Crossref

5´XP sRNA-seq: efficient identification of transcripts with and without 5´ phosphorylation reveals evolutionary conserved small RNA.

Kugelberg U, Nätt D, Skog S, Kutter C, Öst A

RNA Biol 18 (11) 1588-1599 [2021-11-00; online 2020-12-31]

Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Genetic Variant Score and Arrhythmogenic Right Ventricular Cardiomyopathy Phenotype in Plakophilin-2 Mutation Carriers.

Svensson A, Platonov PG, Haugaa KH, ..., Svendsen JH, Gunnarsson C

Cardiology 146 (6) 763-771 [2021-09-01; online 2021-09-01]

Clinical Genomics Linköping [Service]

PubMed DOI Crossref

EBF1 and PAX5 control pro-B cell expansion via opposing regulation of the Myc gene.

Somasundaram R, Jensen CT, Tingvall-Gustafsson J, ..., Ungerbäck J, Sigvardsson M

Blood 137 (22) 3037-3049 [2021-06-03; online 2021-02-24]

Clinical Genomics Linköping [Service]

PubMed DOI Crossref

B Lymphocyte Specification Is Preceded by Extensive Epigenetic Priming in Multipotent Progenitors.

Strid T, Okuyama K, Tingvall-Gustafsson J, ..., Ungerbäck J, Sigvardsson M

J. Immunol. 206 (11) 2700-2713 [2021-06-01; online 2021-05-21]

Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Complement-Opsonized HIV Modulates Pathways Involved in Infection of Cervical Mucosal Tissues: A Transcriptomic and Proteomic Study.

Svanberg C, Ellegård R, Crisci E, ..., Shankar EM, Larsson M

Front Immunol 12 (-) 625649 [2021-05-20; online 2021-05-20]

Bioinformatics Compute and Storage [Service] Clinical Genomics Linköping [Service]

PubMed DOI Crossref

X-chromosome variants are associated with aldosterone producing adenomas.

Dutta RK, Larsson M, Arnesen T, ..., Gimm O, Söderkvist P

Sci Rep 11 (1) 10562 [2021-05-18; online 2021-05-18]

Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Association between inflammasome-related polymorphisms and psoriatic arthritis.

Juneblad K, Kastbom A, Johansson L, ..., Söderkvist P, Alenius G

Scand. J. Rheumatol. 50 (3) 206-212 [2021-05-00; online 2020-12-10]

Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Deletions on Chromosome Y and Downregulation of the SRY Gene in Tumor Tissue Are Associated with Worse Survival of Glioblastoma Patients.

Łysiak M, Smits A, Roodakker KR, ..., Söderkvist P, Malmström A

Cancers (Basel) 13 (7) - [2021-03-31; online 2021-03-31]

Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Sex Disparities in MGMT Promoter Methylation and Survival in Glioblastoma: Further Evidence from Clinical Cohorts.

Smits A, Lysiak M, Magnusson A, ..., Söderkvist P, Malmström A

J Clin Med 10 (4) - [2021-02-03; online 2021-02-03]

Clinical Genomics Linköping [Service]

Year 2020

PubMed DOI Crossref

Activation of RAS Signalling is Associated with Altered Cell Adhesion in Phaeochromocytoma.

Rossitti HM, Dutta RK, Larsson C, ..., Söderkvist P, Gimm O

Int J Mol Sci 21 (21) 8072 [2020-10-29; online 2020-10-29]

Bioinformatics Compute and Storage [Service] Clinical Genomics Linköping [Service]

PubMed DOI Crossref

ABCB1 single-nucleotide variants and survival in patients with glioblastoma treated with radiotherapy concomitant with temozolomide.

Malmström A, Łysiak M, Åkesson L, ..., Green H, Söderkvist P

Pharmacogenomics J. 20 (2) 213-219 [2020-04-00; online 2019-10-17]

Bioinformatics Compute and Storage [Service] Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Do we really know who has an MGMT methylated glioma? Results of an international survey regarding use of MGMT analyses for glioma.

Malmström A, Łysiak M, Kristensen BW, ..., Henriksson R, Söderkvist P

Neurooncol Pract 7 (1) 68-76 [2020-01-00; online 2019-09-24]

Clinical Genomics Linköping [Service]

Year 2019

PubMed DOI Crossref

Novel BEST1 gene mutations associated with two different forms of macular dystrophy in Tunisian families.

Chibani Z, Abid IZ, Molbaek A, ..., Feki J, Hmani-Aifa M

Clin Exp Ophthalmol 47 (8) 1063-1073 [2019-11-00; online 2019-07-24]

Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Assessment of genetic and non-genetic risk factors for venous thromboembolism in glioblastoma - The predictive significance of B blood group.

Heenkenda MK, Malmström A, Lysiak M, ..., Uppugunduri S, Osman A

Thromb. Res. 183 (-) 136-142 [2019-11-00; online 2019-10-22]

Clinical Genomics Linköping [Service]

PubMed DOI Crossref

A somatic mutation in CLCN2 identified in a sporadic aldosterone-producing adenoma.

Dutta RK, Arnesen T, Heie A, ..., Söderkvist P, Gimm O

Eur. J. Endocrinol. 181 (5) K37-K41 [2019-11-00; online 2019-09-07]

Clinical Genomics Linköping [Service]