Publications 2018

Title Authors Journal Published Online
Sensitive ADAR editing reporter in cancer cells enables high-throughput screening of small molecule libraries Fritzell K, Xu LD, Otrocka M, Andréasson C, Öhman M Nucleic Acids Res - (-) - 2018-12-22 2018-12-22
Zebrafish larvae as a model system for systematic characterization of drugs and genes in dyslipidemia and atherosclerosis Bandaru MK, Emmanouilidou A, Ranefall P, ..., Ingelsson E, den Hoed M - - (-) - 2018-12-20 2018-12-20
PRR14L mutations are associated with chromosome 22 acquired uniparental disomy, age-related clonal hematopoiesis and myeloid neoplasia. Chase A, Pellagatti A, Singh S, ..., Boultwood J, Cross NCP Leukemia - (-) - 2018-12-20 2018-12-20
Targeted Delivery of Stk25 Antisense Oligonucleotides to Hepatocytes Protects Mice Against Nonalcoholic Fatty Liver Disease. Cansby E, Nuñez-Durán E, Magnusson E, ..., Aghajan M, Mahlapuu M Cellular and Molecular Gastroenterology and Hepatology 7 (3) 597-618 2018-12-19 2018-12-19
Carbon's Three-Center, Four-Electron Tetrel Bond, Treated Experimentally. Karim A, Schulz N, Andersson H, ..., Keller S, Erdélyi M J. Am. Chem. Soc. 140 (50) 17571-17579 2018-12-19 2018-12-07
Red Fluorescent Chlamydia trachomatis Applied to Live Cell Imaging and Screening for Antibacterial Agents. Mojica SA, Eriksson AU, Davis RA, ..., Elofsson M, Gylfe Å Front Microbiol 9 (-) 3151 2018-12-18 2018-12-18
Rainbow Trout Maintain Intestinal Transport and Barrier Functions Following Exposure to Polystyrene Microplastics. Ašmonaitė G, Sundh H, Asker N, Carney Almroth B Environ. Sci. Technol. 52 (24) 14392-14401 2018-12-18 2018-12-05
A multigene typing system for human adenoviruses reveals a new genotype in a collection of Swedish clinical isolates. Kaján GL, Lipiec A, Bartha D, Allard A, Arnberg N PLoS ONE 13 (12) e0209038 2018-12-14 2018-12-14
Significantly altered peripheral blood cell DNA methylation profile as a result of immediate effect of metformin use in healthy individuals. Elbere I, Silamikelis I, Ustinova M, ..., Schiöth HB, Klovins J Clin Epigenetics 10 (1) 156 2018-12-13 2018-12-13
Transcriptional landscape of B cell precursor acute lymphoblastic leukemia based on an international study of 1,223 cases. Li JF, Dai YT, Lilljebjörn H, ..., Chen SJ, Huang JY Proc. Natl. Acad. Sci. U.S.A. 115 (50) E11711-E11720 2018-12-11 2018-11-28
Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by tandem mass spectrometry proteomics. Karlsson R, Gonzales-Siles L, Gomila M, ..., Kristiansson E, Moore ERB PLoS ONE 13 (12) e0208804 2018-12-10 2018-12-10
Progress on Identifying and Characterizing the Human Proteome: 2018 Metrics from the HUPO Human Proteome Project. Omenn GS, Lane L, Overall CM, ..., Baker MS, Deutsch EW J. Proteome Res. 17 (12) 4031-4041 2018-12-07 2018-08-23
PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud. Peters K, Bradbury J, Bergmann S, ..., Zanetti G, Steinbeck C Gigascience - (-) - 2018-12-07 2018-12-07
Cotranslational Folding of a Pentarepeat β-Helix Protein. Notari L, Martínez-Carranza M, Farías-Rico JA, Stenmark P, von Heijne G J. Mol. Biol. 430 (24) 5196-5206 2018-12-07 2018-10-27
Somatic Structural Alterations in Childhood Leukemia Can Be Backtracked in Neonatal Dried Blood Spots by Use of Whole-Genome Sequencing and Digital PCR. Taylan F, Bang B, Öfverholm II, ..., Zachariadis V, Nordgren A Clin. Chem. - (-) - 2018-12-05 2018-12-05
Porous Cellulose Nanofiber-Based Microcapsules for Biomolecular Sensing. Paulraj T, Wennmalm S, Riazanova AV, ..., Crespo GA, Svagan AJ ACS Appl Mater Interfaces 10 (48) 41146-41154 2018-12-05 2018-11-26
A Novel Inorganic Sulfur Compound Metabolizing Ferroplasma-Like Population Is Suggested to Mediate Extracellular Electron Transfer. Ni G, Simone D, Palma D, ..., Turner S, Dopson M Front Microbiol 9 (-) 2945 2018-12-05 2018-12-05
Spatially and functionally distinct subclasses of breast cancer-associated fibroblasts revealed by single cell RNA sequencing. Bartoschek M, Oskolkov N, Bocci M, ..., Björklund Å, Pietras K Nat Commun 9 (1) 5150 2018-12-04 2018-12-04
Membrane fluidity is regulated by the C. elegans transmembrane protein FLD-1 and its human homologs TLCD1/2. Ruiz M, Bodhicharla R, Svensk E, ..., Boren J, Pilon M Elife 7 (-) - 2018-12-04 2018-12-04
Crystal Structures and Cytotoxicity of ent-Kaurane-Type Diterpenoids from Two Aspilia Species. Yaouba S, Valkonen A, Coghi P, ..., Erdélyi M, Yenesew A Molecules 23 (12) 3199 2018-12-04 2018-12-04
Transcriptional and Epigenetic Changes Influencing Skeletal Muscle Metabolism in Women With Polycystic Ovary Syndrome. Nilsson E, Benrick A, Kokosar M, ..., Ling C, Stener-Victorin E J. Clin. Endocrinol. Metab. 103 (12) 4465-4477 2018-12-01 2018-08-17
Impact of forced fatty acid synthesis on metabolism and physiology of Saccharomyces cerevisiae. Gossing M, Smialowska A, Nielsen J FEMS Yeast Res. 18 (8) - 2018-12-01 2018-09-01
Whole Exome Sequencing of Patients from Multicase Families with Systemic Lupus Erythematosus Identifies Multiple Rare Variants Delgado-Vega AM, Martínez-Bueno M, Oparina NY, ..., Kozyrev SV, Alarcón-Riquelme ME Sci Rep 8 (1) - 2018-12-00 2018-06-08
Ulvan lyase from Formosa agariphila and its applicability in depolymerisation of ulvan extracted from three different Ulva species Konasani VR, Jin C, Karlsson NG, Albers E Algal Research 36 (-) 106-114 2018-12-00 2018-12-00
Transancestral GWAS of alcohol dependence reveals common genetic underpinnings with psychiatric disorders Walters RK, None , Polimanti R, ..., Edenberg HJ, Agrawal A Nat Neurosci 21 (12) 1656-1669 2018-12-00 2018-11-26
The gut microbiome participates in transgenerational inheritance of low-temperature responses in Drosophila melanogaster. Zare A, Johansson AM, Karlsson E, Delhomme N, Stenberg P FEBS Lett. 592 (24) 4078-4086 2018-12-00 2018-11-15
The Mutant p53-Targeting Compound APR-246 Induces ROS-Modulating Genes in Breast Cancer Cells. Synnott NC, Madden SF, Bykov VJN, ..., Wiman KG, Duffy MJ Transl Oncol 11 (6) 1343-1349 2018-12-00 2018-09-06
Targeting PFKFB3 radiosensitizes cancer cells and suppresses homologous recombination Gustafsson NMS, Färnegårdh K, Bonagas N, ..., Olin T, Helleday T Nat Commun 9 (1) - 2018-12-00 2018-09-24
T-cell transcriptomics from peripheral blood highlights differences between polymyositis and dermatomyositis patients Houtman M, Ekholm L, Hesselberg E, ..., Lundberg IE, Padyukov L Arthritis Res. Ther. 20 (1) - 2018-12-00 2018-08-29
Structure of a functional obligate complex III 2IV2 respiratory supercomplex from Mycobacterium smegmatis. Wiseman B, Nitharwal RG, Fedotovskaya O, ..., Brzezinski P, Högbom M Nat. Struct. Mol. Biol. 25 (12) 1128-1136 2018-12-00 2018-12-05
Stereocilin gene variants associated with episodic vertigo: expansion of the DFNB16 phenotype. Frykholm C, Klar J, Tomanovic T, Ameur A, Dahl N Eur. J. Hum. Genet. 26 (12) 1871-1874 2018-12-00 2018-09-24
Somatic mutagenesis in satellite cells associates with human skeletal muscle aging Franco I, Johansson A, Olsson K, ..., Fischer H, Eriksson M Nat Commun 9 (1) - 2018-12-00 2018-02-23
Sharing of photobionts in sympatric populations of Thamnolia and Cetraria lichens: evidence from high-throughput sequencing Onuț-Brännström I, Benjamin M, Scofield DG, ..., Lindström ES, Johannesson H Sci Rep 8 (1) - 2018-12-00 2018-03-13
RNA-sequencing reveals long-term effects of silver nanoparticles on human lung cells Gliga AR, Di Bucchianico S, Lindvall J, Fadeel B, Karlsson HL Sci Rep 8 (1) - 2018-12-00 2018-04-27
Publisher Correction: A DHODH inhibitor increases p53 synthesis and enhances tumor cell killing by p53 degradation blockage Ladds MJGW, van Leeuwen IMM, Drummond CJ, ..., McCormack E, Laín S Nat Commun 9 (1) - 2018-12-00 2018-05-22
Protein Profiling in Serum and Cerebrospinal Fluid Following Complex Surgery on the Thoracic Aorta Identifies Biological Markers of Neurologic Injury. Lindblom RPF, Shen Q, Axén S, ..., Kamali-Moghaddam M, Thelin S J. of Cardiovasc. Trans. Res. 11 (6) 503-516 2018-12-00 2018-10-26
Oxidatively stressed mitochondria-mimicking membranes: A molecular insight into their organization during apoptosis. Dingeldein APG, Sparrman T, Gröbner G Biochimica et Biophysica Acta (BBA) - Biomembranes 1860 (12) 2644-2654 2018-12-00 2018-10-05
Molecular Investigation of the Ciliate Spirostomum semivirescens, with First Transcriptome and New Geographical Records Hines HN, Onsbring H, Ettema TJG, Esteban GF Protist 169 (6) 875-886 2018-12-00 2018-12-00
Linking FOXO3, NCOA3, and TCF7L2 to Ras pathway phenotypes through a genome-wide forward genetic screen in human colorectal cancer cells Kundu S, Ali MA, Handin N, ..., Hellström M, Sjöblom T Genome Med 10 (1) - 2018-12-00 2018-01-04
Intramolecular 13C analysis of tree rings provides multiple plant ecophysiology signals covering decades Wieloch T, Ehlers I, Yu J, ..., Gessler A, Schleucher J Sci Rep 8 (1) - 2018-12-00 2018-03-22
Individual Genetic Variation Might Predict Acute Skin Reactions in Women Undergoing Adjuvant Breast Cancer Radiotherapy. Oliva D, Nilsson M, Strandéus M, ..., Laytragoon-Lewin N, Lewin F Anticancer Res. 38 (12) 6763-6770 2018-12-00 2018-12-07
Image-Based Detection of Patient-Specific Drug-Induced Cell-Cycle Effects in Glioblastoma. Matuszewski DJ, Wählby C, Krona C, Nelander S, Sintorn IM SLAS DISCOVERY: Advancing Life Sciences R&D 23 (10) 1030-1039 2018-12-00 2018-08-03
High-efficient bacterial production of human ApoA-I amyloidogenic variants. Del Giudice R, Lagerstedt JO Protein Sci. 27 (12) 2101-2109 2018-12-00 2018-10-07
Genomic screening in rare disorders: New mutations and phenotypes, highlighting ALG14 as a novel cause of severe intellectual disability. Kvarnung M, Taylan F, Nilsson D, ..., Nordgren A, Lundberg ES Clin. Genet. 94 (6) 528-537 2018-12-00 2018-10-15
Genomes from uncultivated prokaryotes: a comparison of metagenome-assembled and single-amplified genomes Alneberg J, Karlsson CMG, Divne AM, ..., Andersson AF, Pinhassi J Microbiome 6 (1) - 2018-12-00 2018-09-28
Genome sequencing and conservation genomics in the Scandinavian wolverine population Ekblom R, Brechlin B, Persson J, ..., Flagstad Ø, Ellegren H Conservation Biology 32 (6) 1301-1312 2018-12-00 2018-09-07
Genetic characterization of a novel picorna-like virus in Culex spp. mosquitoes from Mozambique Cholleti H, Hayer J, Fafetine J, Berg M, Blomström AL Virol J 15 (1) - 2018-12-00 2018-04-18
Gene expression correlated with delay in shell formation in larval Pacific oysters (Crassostrea gigas) exposed to experimental ocean acidification provides insights into shell formation mechanisms De Wit P, Durland E, Ventura A, Langdon CJ BMC Genomics 19 (1) - 2018-12-00 2018-02-22
GWAS and colocalization analyses implicate carotid intima-media thickness and carotid plaque loci in cardiovascular outcomes Franceschini N, None , Giambartolomei C, ..., Casas JP, O’Donnell CJ Nat Commun 9 (1) - 2018-12-00 2018-12-03
Extracellular nanovesicles released from the commensal yeast Malassezia sympodialis are enriched in allergens and interact with cells in human skin Johansson HJ, Vallhov H, Holm T, ..., Lehtiö J, Scheynius A Sci Rep 8 (1) - 2018-12-00 2018-06-15
Exploring benzimidazole resistance in Haemonchus contortus by next generation sequencing and droplet digital PCR Baltrušis P, Halvarsson P, Höglund J International Journal for Parasitology: Drugs and Drug Resistance 8 (3) 411-419 2018-12-00 2018-12-00
Epigenetics and early domestication: differences in hypothalamic DNA methylation between red junglefowl divergently selected for high or low fear of humans Bélteky J, Agnvall B, Bektic L, ..., Jensen P, Guerrero-Bosagna C Genet. Sel. Evol. 50 (1) - 2018-12-00 2018-04-02
Eleven percent intact PGM3 in a severely immunodeficient patient with a novel splice-site mutation, a case report Lundin KE, Wang Q, Hamasy A, ..., Ekwall O, Smith CIE BMC Pediatr 18 (1) 285 2018-12-00 2018-08-29
Effects of predation stress and food ration on perch gut microbiota Zha Y, Eiler A, Johansson F, Svanbäck R Microbiome 6 (1) - 2018-12-00 2018-02-06
EMBLmyGFF3: a converter facilitating genome annotation submission to European Nucleotide Archive Norling M, Jareborg N, Dainat J BMC Res Notes 11 (1) - 2018-12-00 2018-08-13
Convergent evolution of complex genomic rearrangements in two fungal meiotic drive elements Svedberg J, Hosseini S, Chen J, ..., Lascoux M, Johannesson H Nat Commun 9 (1) - 2018-12-00 2018-10-12
Comprehensive analysis of CTNNB1 in adrenocortical carcinomas: Identification of novel mutations and correlation to survival Maharjan R, Backman S, Åkerström T, Hellman P, Björklund P Sci Rep 8 (1) 8610 2018-12-00 2018-06-05
Comparative omics and feeding manipulations in chicken indicate a shift of the endocrine role of visceral fat towards reproduction Bornelöv S, Seroussi E, Yosefi S, ..., Andersson L, Friedman-Einat M BMC Genomics 19 (1) - 2018-12-00 2018-04-26
Anti-Rift Valley fever virus activity in vitro, pre-clinical pharmacokinetics and oral bioavailability of benzavir-2, a broad-acting antiviral compound Islam MK, Strand M, Saleeb M, ..., Elofsson M, Evander M Sci Rep 8 (1) - 2018-12-00 2018-01-31
Analysis of porcine body size variation using re-sequencing data of miniature and large pigs Reimer C, Rubin CJ, Sharifi AR, ..., Schlather M, Simianer H BMC Genomics 19 (1) - 2018-12-00 2018-09-19
Aberrant splicing and defective mRNA production induced by somatic spliceosome mutations in myelodysplasia Shiozawa Y, Malcovati L, Gallì A, ..., Ogawa S, Cazzola M Nat Commun 9 (1) - 2018-12-00 2018-09-07
A randomized controlled cross-over trial investigating the effect of anti-inflammatory diet on disease activity and quality of life in rheumatoid arthritis: the Anti-inflammatory Diet In Rheumatoid Arthritis (ADIRA) study protocol Winkvist A, Bärebring L, Gjertsson I, Ellegård L, Lindqvist HM Nutr J 17 (1) - 2018-12-00 2018-04-20
A novel ulvan lyase family with broad-spectrum activity from the ulvan utilisation loci of Formosa agariphila KMM 3901 Konasani VR, Jin C, Karlsson NG, Albers E Sci Rep 8 (1) - 2018-12-00 2018-10-02
A novel derivative of the fungal antimicrobial peptide plectasin is active against Mycobacterium tuberculosis. Tenland E, Krishnan N, Rönnholm A, ..., Robertson BD, Godaly G Tuberculosis 113 (-) 231-238 2018-12-00 2018-10-30
A major locus controls local adaptation and adaptive life history variation in a perennial plant Wang J, Ding J, Tan B, ..., Street NR, Ingvarsson PK Genome Biol. 19 (1) - 2018-12-00 2018-06-04
A drug screening assay on cancer cells chronically adapted to acidosis Pellegrini P, Serviss JT, Lundbäck T, ..., Linder S, De Milito A Cancer Cell Int 18 (1) - 2018-12-00 2018-09-25
A comprehensive map coupling histone modifications with gene regulation in adult dopaminergic and serotonergic neurons Södersten E, Toskas K, Rraklli V, ..., Perlmann T, Holmberg J Nat Commun 9 (1) - 2018-12-00 2018-03-26
Using High Content Imaging to Quantify Target Engagement in Adherent Cells. Axelsson H, Almqvist H, Seashore-Ludlow B J Vis Exp - (141) - 2018-11-29 2018-11-29
The Human Salivary Antimicrobial Peptide Profile according to the Oral Microbiota in Health, Periodontitis and Smoking. Grant M, Kilsgård O, Åkerman S, ..., Malmström J, Jönsson D J Innate Immun 11 (5) 432-444 2018-11-28 2018-11-28
RollFISH achieves robust quantification of single-molecule RNA biomarkers in paraffin-embedded tumor tissue samples. Wu C, Simonetti M, Rossell C, ..., Crosetto N, Nilsson M Commun Biol 1 (-) 209 2018-11-28 2018-11-28
Metabolic control of PPAR activity by aldehyde dehydrogenase regulates invasive cell behavior and predicts survival in hepatocellular and renal clear cell carcinoma. Andrejeva D, Kugler JM, Nguyen HT, ..., Loya AC, Cohen SM BMC Cancer 18 (1) 1180 2018-11-28 2018-11-28
Folding pathway of an Ig domain is conserved on and off the ribosome. Tian P, Steward A, Kudva R, ..., Clarke J, Best RB Proc. Natl. Acad. Sci. U.S.A. 115 (48) E11284-E11293 2018-11-27 2018-11-09
Depth and Dissolved Organic Carbon Shape Microbial Communities in Surface Influenced but Not Ancient Saline Terrestrial Aquifers. Lopez-Fernandez M, Åström M, Bertilsson S, Dopson M Front Microbiol 9 (-) 2880 2018-11-27 2018-11-27
The shape of the bacterial ribosome exit tunnel affects cotranslational protein folding. Kudva R, Tian P, Pardo-Avila F, ..., Bernstein HD, von Heijne G Elife 7 (-) - 2018-11-26 2018-11-26
Out in the Cold: Identification of Genomic Regions Associated With Cold Tolerance in the Biocontrol Fungus Clonostachys rosea Through Genome-Wide Association Mapping. Broberg M, Dubey M, Sun MH, ..., Brandström Durling M, Karlsson M Front Microbiol 9 (-) 2844 2018-11-22 2018-11-22
Cell-free DNA profiling of metastatic prostate cancer reveals microsatellite instability, structural rearrangements and clonal hematopoiesis. Mayrhofer M, De Laere B, Whitington T, ..., Grönberg H, Lindberg J Genome Med 10 (1) 85 2018-11-21 2018-05-11
Metatranscriptomes Reveal That All Three Domains of Life Are Active but Are Dominated by Bacteria in the Fennoscandian Crystalline Granitic Continental Deep Biosphere Lopez-Fernandez M, Simone D, Wu X, ..., Bertilsson S, Dopson M MBio 9 (6) - 2018-11-20 2018-11-20
Quantitative Interpretation of Intracellular Drug Binding and Kinetics Using the Cellular Thermal Shift Assay Seashore-Ludlow B, Axelsson H, Almqvist H, ..., Jonsson M, Lundbäck T Biochemistry - (-) - 2018-11-19 2018-11-19
Genome-Wide Association Studies of Estimated Fatty Acid Desaturase Activity in Serum and Adipose Tissue in Elderly Individuals: Associations with Insulin Sensitivity Marklund M, Morris A, Mahajan A, ..., Lind L, Risérus U Nutrients 10 (11) 1791 2018-11-17 2018-11-17
Small-molecule inhibitor of OGG1 suppresses proinflammatory gene expression and inflammation. Visnes T, Cázares-Körner A, Hao W, ..., Boldogh I, Helleday T Science 362 (6416) 834-839 2018-11-16 2018-11-18
MutT homologue 1 (MTH1) catalyzes the hydrolysis of mutagenic O6-methyl-dGTP. Jemth AS, Gustafsson R, Bräutigam L, ..., Stenmark P, Helleday T Nucleic Acids Res. 46 (20) 10888-10904 2018-11-16 2018-10-12
Expression profiling and in situ screening of circular RNAs in human tissues. Zaghlool A, Ameur A, Wu C, ..., Nilsson M, Feuk L Sci Rep 8 (1) 16953 2018-11-16 2018-11-16
Diazotrophs and N2-Fixation Associated With Particles in Coastal Estuarine Waters. Pedersen JN, Bombar D, Paerl RW, Riemann L Front Microbiol 9 (-) 2759 2018-11-16 2018-11-16
Diet-dependent gene expression highlights the importance of Cytochrome P450 in detoxification of algal secondary metabolites in a marine isopod. De Wit P, Yamada K, Panova M, André C, Johannesson K Sci Rep 8 (1) 16824 2018-11-14 2018-11-14
Comparative Analysis of the Nodule Transcriptomes of Ceanothus thyrsiflorus (Rhamnaceae, Rosales) and Datisca glomerata (Datiscaceae, Cucurbitales). Salgado MG, van Velzen R, Nguyen TV, ..., Lundin D, Pawlowski K Front Plant Sci 9 (-) 1629 2018-11-14 2018-11-14
Satiety Factors Oleoylethanolamide, Stearoylethanolamide, and Palmitoylethanolamide in Mother's Milk Are Strongly Associated with Infant Weight at Four Months of Age-Data from the Odense Child Cohort. Bruun S, Gouveia-Figueira S, Domellöf M, ..., Fowler CJ, Zachariassen G Nutrients 10 (11) 1747 2018-11-13 2018-11-13
Integrative Analysis of Three RNA Sequencing Methods Identifies Mutually Exclusive Exons of MADS-Box Isoforms During Early Bud Development in Picea abies Akhter S, Kretzschmar WW, Nordal V, ..., Emanuelsson O, Sundström JF Front Plant Sci 9 (-) - 2018-11-13 2018-11-13
Parallel plumage colour evolution and introgressive hybridization in wheatears. Schweizer M, Warmuth V, Alaei Kakhki N, ..., Suh A, Burri R J. Evol. Biol. - (-) - 2018-11-12 2018-11-12
Disease-specific oligodendrocyte lineage cells arise in multiple sclerosis Falcão AM, van Bruggen D, Marques S, ..., Guerreiro-Cacais AO, Castelo-Branco G Nat Med - (-) - 2018-11-12 2018-11-12
New tools for automated high-resolution cryo-EM structure determination in RELION-3 Zivanov J, Nakane T, Forsberg BO, ..., Lindahl E, Scheres SH Elife 7 (-) - 2018-11-09 2018-11-09
Affinity to cellulose is a shared property among coiled-coil domains of intermediate filaments and prokaryotic intermediate filament-like proteins. Söderholm N, Javadi A, Flores IS, Flärdh K, Sandblad L Sci Rep 8 (1) 16524 2018-11-08 2018-11-08
Markers of Basement Membrane Remodeling Are Associated With Higher Mortality in Patients With Known Atherosclerosis. Holm Nielsen S, Tengryd C, Edsfeldt A, ..., Nilsson J, Goncalves I J Am Heart Assoc 7 (21) e009193 2018-11-06 2019-01-05
Vandermonde Factorization of Hankel Matrix for Complex Exponential Signal Recovery—Application in Fast NMR Spectroscopy Ying J, Cai JF, Guo D, ..., Chen Z, Qu X IEEE Trans. Signal Process. 66 (21) 5520-5533 2018-11-01 2018-11-01
Computational and Statistical Analysis of Array-Based DNA Methylation Data. Nordlund J, Bäcklin C, Raine A Methods Mol. Biol. 1878 (-) 173-191 2018-11-01 2018-11-01
VEGF receptor-2/neuropilin 1 trans-complex formation between endothelial and tumor cells is an independent predictor of pancreatic cancer survival Morin E, Sjöberg E, Tjomsland V, ..., Sjöblom T, Claesson-Welsh L J. Pathol 246 (3) 311-322 2018-11-00 2018-09-04
Upregulated BMP-Smad signaling activity in the glucuronyl C5-epimerase knock out MEF cells Batool T, Fang J, Jansson V, ..., Moustakas A, Li JP Cellular Signalling - (-) - 2018-11-00 2018-11-00
Uncovering the regional localization of inhaled salmeterol retention in the lung. Bäckström E, Hamm G, Nilsson A, ..., Goodwin RJA, Fridén M Drug Deliv 25 (1) 838-845 2018-11-00 2018-03-29
Serum, plasma and erythrocyte membrane lipidomes in infants fed formula supplemented with bovine milk fat globule membranes. Grip T, Dyrlund TS, Ahonen L, ..., Orešič M, Timby N Pediatr. Res. 84 (5) 726-732 2018-11-00 2018-08-04
Replicative and non-replicative mechanisms in the formation of clustered CNVs are indicated by whole genome characterization. Nazaryan-Petersen L, Eisfeldt J, Pettersson M, ..., Tümer Z, Lindstrand A PLoS Genet. 14 (11) e1007780 2018-11-00 2018-11-12
Preparation of plant tissue to enable Spatial Transcriptomics profiling using barcoded microarrays. Giacomello S, Lundeberg J Nat Protoc 13 (11) 2425-2446 2018-11-00 2018-10-26
One-view breast tomosynthesis versus two-view mammography in the Malmö Breast Tomosynthesis Screening Trial (MBTST): a prospective, population-based, diagnostic accuracy study Zackrisson S, Lång K, Rosso A, ..., Tingberg A, Andersson I The Lancet Oncology 19 (11) 1493-1503 2018-11-00 2018-11-00
Notch signaling promotes a HIF2α-driven hypoxic response in multiple tumor cell types. Mutvei AP, Landor SK, Fox R, ..., Jin S, Lendahl U Oncogene 37 (46) 6083-6095 2018-11-00 2018-07-11
Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens. Srinivas V, Lebrette H, Lundin D, ..., Sjöberg BM, Högbom M Nature 563 (7731) 416-420 2018-11-00 2018-10-31
LMO7 and LIMCH1 interact with LRIG proteins in lung cancer, with prognostic implications for early-stage disease. Karlsson T, Kvarnbrink S, Holmlund C, ..., Johansson M, Hedman H Lung Cancer 125 (-) 174-184 2018-11-00 2018-09-24
Isomeric Separation and Recognition of Anionic and Zwitterionic N-glycans from Royal Jelly Glycoproteins. Hykollari A, Malzl D, Eckmair B, ..., Wilson IBH, Paschinger K Mol. Cell Proteomics 17 (11) 2177-2196 2018-11-00 2018-08-13
Glycomics@ExPASy: Bridging the Gap. Mariethoz J, Alocci D, Gastaldello A, ..., Packer NH, Lisacek F Mol. Cell Proteomics 17 (11) 2164-2176 2018-11-00 2018-08-10
Genomes of two archaeal endosymbionts show convergent adaptations to an intracellular lifestyle Lind AE, Lewis WH, Spang A, ..., Embley TM, Ettema TJG ISME J 12 (11) 2655-2667 2018-11-00 2018-07-10
Genome Analyses of >200,000 Individuals Identify 58 Loci for Chronic Inflammation and Highlight Pathways that Link Inflammation and Complex Disorders Ligthart S, Vaez A, Võsa U, ..., Frayling TM, Slagboom EP The American Journal of Human Genetics 103 (5) 691-706 2018-11-00 2018-11-00
Fine-mapping type 2 diabetes loci to single-variant resolution using high-density imputation and islet-specific epigenome maps. Mahajan A, Taliun D, Thurner M, ..., Boehnke M, McCarthy MI Nat. Genet. 50 (11) 1505-1513 2018-11-00 2018-10-08
Detection of autoantibodies against cancer-testis antigens in non-small cell lung cancer. Djureinovic D, Dodig-Crnković T, Hellström C, ..., Schwenk JM, Micke P Lung Cancer 125 (-) 157-163 2018-11-00 2018-09-17
Convergent evolution of 11p allelic loss in multifocal Wilms tumors arising in WT1 mutation carriers. Valind A, Wessman S, Pal N, ..., Sandstedt B, Gisselsson D Pediatr Blood Cancer 65 (11) e27301 2018-11-00 2018-07-03
Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections. Salmén F, Ståhl PL, Mollbrink A, ..., Frisén J, Lundeberg J Nat Protoc 13 (11) 2501-2534 2018-11-00 2018-10-26
Gene-level associations in suicide attempter families show overrepresentation of synaptic genes and genes differentially expressed in brain development Sokolowski M, Wasserman J, Wasserman D Am. J. Med. Genet. - (-) - 2018-10-31 2018-10-31
Copper Chaperone Atox1 Interacts with Cell Cycle Proteins. Matson Dzebo M, Blockhuys S, Valenzuela S, ..., Esbjörner EK, Wittung-Stafshede P Computational and Structural Biotechnology Journal 16 (-) 443-449 2018-10-31 2018-10-31
SMAD4 Is Essential for Human Cardiac Mesodermal Precursor Cell Formation. Xu J, Gruber PJ, Chien KR Stem Cells - (-) - 2018-10-30 2018-10-30
Quantitative proteomic characterization of the lung extracellular matrix in chronic obstructive pulmonary disease and idiopathic pulmonary fibrosis. Åhrman E, Hallgren O, Malmström L, ..., Westergren-Thorsson G, Malmström J J Proteomics 189 (-) 23-33 2018-10-30 2018-03-01
Cigarette smoking affects microRNAs and inflammatory biomarkers in healthy individuals and an association to single nucleotide polymorphisms is indicated Andersson BÅ, Sayardoust S, Löfgren S, Rutqvist LE, Laytragoon-Lewin N Biomarkers - (-) 1-17 2018-10-30 2018-10-30
Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen Lin YC, Wang J, Delhomme N, ..., Ingvarsson PK, Street NR Proc Natl Acad Sci USA - (-) 201801437 2018-10-29 2018-10-29
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Targeted NUDT5 inhibitors block hormone signaling in breast cancer cells. Page BDG, Valerie NCK, Wright RHG, ..., Beato M, Helleday T Nat Commun 9 (1) 250 2018-01-17 2018-01-17
Genome-wide association study in 79,366 European-ancestry individuals informs the genetic architecture of 25-hydroxyvitamin D levels. Jiang X, O'Reilly PF, Aschard H, ..., Kraft P, Kiel DP Nat Commun 9 (1) 260 2018-01-17 2018-01-17
Alpha-actinin of the chlorarchiniophyte Bigelowiella natans. Backman L PeerJ 6 (-) e4288 2018-01-17 2018-01-17
Spotty Carotid Plaques Are Associated with Inflammation and the Occurrence of Cerebrovascular Symptoms. Halak S, Östling G, Edsfeldt A, ..., Gonçalves I, Asciutto G Cerebrovasc Dis Extra 8 (1) 16-25 2018-01-15 2018-01-15
Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D Jenjaroenpun P, Wongsurawat T, Pereira R, ..., Nielsen J, Nookaew I Nucleic Acids Res - (-) - 2018-01-13 2018-01-13
Rapid hybrid speciation in Darwin’s finches Lamichhaney S, Han F, Webster MT, ..., Grant BR, Grant PR Science 359 (6372) 224-228 2018-01-12 2017-11-23
Meta-analysis of exome array data identifies six novel genetic loci for lung function. Jackson VE, Latourelle JC, Wain LV, ..., Tobin MD, London SJ Wellcome Open Res 3 (-) 4 2018-01-12 2018-01-12
Identification of shared genetic variants between schizophrenia and lung cancer. Zuber V, Jönsson EG, Frei O, ..., Mills IG, Andreassen OA Sci Rep 8 (1) 674 2018-01-12 2018-01-12
The Global Acetylome of the Human Pathogen Vibrio cholerae V52 Reveals Lysine Acetylation of Major Transcriptional Regulators. Jers C, Ravikumar V, Lezyk M, ..., Wai SN, Mijakovic I Front. Cell. Infect. Microbiol. 7 (-) 537 2018-01-11 2018-01-11
Splicing of platelet resident pre-mRNAs upon activation by physiological stimuli results in functionally relevant proteome modifications. Nassa G, Giurato G, Cimmino G, ..., Weisz A, Tarallo R Sci Rep 8 (1) 498 2018-01-11 2018-01-11
Sample handling of gastric tissue and O-glycan alterations in paired gastric cancer and non-tumorigenic tissues. Adamczyk B, Jin C, Polom K, ..., Roviello F, Karlsson NG Sci Rep 8 (1) 242 2018-01-10 2018-01-10
Bifidobacteria or Fiber Protects against Diet-Induced Microbiota-Mediated Colonic Mucus Deterioration. Schroeder BO, Birchenough GMH, Ståhlman M, ..., Hansson GC, Bäckhed F Cell Host Microbe 23 (1) 27-40.e7 2018-01-10 2017-12-21
A protein interaction network centered on leucine-rich repeats and immunoglobulin-like domains 1 (LRIG1) regulates growth factor receptors Faraz M, Herdenberg C, Holmlund C, Henriksson R, Hedman H J. Biol. Chem. - (-) jbc.M117.807487 2018-01-09 2018-01-09
Discovering viral genomes in human metagenomic data by predicting unknown protein families. Barrientos-Somarribas M, Messina DN, Pou C, ..., Andersson B, Sonnhammer ELL Sci Rep 8 (1) 28 2018-01-08 2018-01-08
Comprehensive Mass Spectrometric Survey of Streptococcus pyogenes Subcellular Proteomes. Wilk L, Happonen L, Malmström J, Herwald H J. Proteome Res. 17 (1) 600-617 2018-01-05 2017-12-04
The ATPase activity of Asna1/TRC40 is required for pancreatic progenitor cell survival. Norlin S, Parekh V, Edlund H Development 145 (1) dev154468 2018-01-03 2018-01-03
Evaluating vacquinol-1 in rats carrying glioblastoma models RG2 and NS1 Ahlstedt J, Förnvik K, Zolfaghari S, ..., Salford LG, Redebrandt HN Oncotarget - (-) - 2018-01-03 2018-01-03
Analysis of the hybrid genomes of two field isolates of the soil-borne fungal species Verticillium longisporum. Fogelqvist J, Tzelepis G, Bejai S, ..., Schwelm A, Dixelius C BMC Genomics 19 (1) 14 2018-01-03 2018-01-03
A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of​ ​​Populus​​ ​trees. Obudulu O, Mähler N, Skotare T, ..., Trygg J, Tuominen H BMC Genomics 19 (1) 11 2018-01-03 2018-01-03
Differential impact of RB status on E2F1 reprogramming in human cancer. McNair C, Xu K, Mandigo AC, ..., Brown M, Knudsen KE J. Clin. Invest. 128 (1) 341-358 2018-01-02 2017-12-04
Angiopoietin-1 deficiency increases renal capillary rarefaction and tubulointerstitial fibrosis in mice Loganathan K, Salem Said E, Winterrowd E, ..., Quaggin SE, Jeansson M PLoS ONE 13 (1) e0189433 2018-01-02 2018-01-02
SMLocalizer, a GPU accelerated ImageJ plugin for single molecule localization microscopy Bernhem K, Brismar H Bioinformatics 34 (1) 137-138 2018-01-01 2017-09-04
Metabolism and Whole-Body Fat Oxidation Following Postexercise Carbohydrate or Protein Intake. Andersson-Hall U, Pettersson S, Edin F, ..., Malmodin D, Madsen K International Journal of Sport Nutrition and Exercise Metabolism 28 (1) 37-45 2018-01-01 2018-01-17
Metabolic and functional phenotypic profiling of Drosophila melanogaster reveals reduced sex differentiation under stressful environmental conditions Ørsted M, Malmendal A, Muñoz J, Kristensen TN Biol J Linn Soc Lond 123 (1) 155-162 2018-01-01 2017-10-31
Cytokine Autoantibody Screening in the Swedish Addison Registry Identifies Patients With Undiagnosed APS1 Eriksson D, Dalin F, Eriksson GN, ..., Munoz KD, None J. Clin. Endocrinol. Metab. 103 (1) 179-186 2018-01-01 2017-10-20
Viral metagenomics reveals the presence of highly divergent quaranjavirus in Rhipicephalus ticks from Mozambique Cholleti H, Hayer J, Mulandane FC, ..., Berg M, Blomström AL Infect Ecol Epidemiol 8 (1) 1478585 2018-01-00 2018-05-28
Urban landscape genomics identifies fine-scale gene flow patterns in an avian invasive. Low GW, Chattopadhyay B, Garg KM, ..., Wu S, Rheindt FE Heredity (Edinb) 120 (2) 138-153 2018-01-00 2017-12-11
The SubCons webserver: A user friendly web interface for state-of-the-art subcellular localization prediction. Salvatore M, Shu N, Elofsson A Protein Sci. 27 (1) 195-201 2018-01-00 2017-10-24
Surface treatment of cellulose nanocrystals (CNC): effects on dispersion rheology Sahlin K, Forsgren L, Moberg T, ..., Rigdahl M, Westman G Cellulose 25 (1) 331-345 2018-01-00 2017-11-28
Solid and fluid segments within the same molecule of stratum corneum ceramide lipid. Pham QD, Mojumdar EH, Gooris GS, ..., Sparr E, Topgaard D Quart. Rev. Biophys. 51 (-) e7 2018-01-00 2018-01-01
Single-molecule DNA sequencing of acute myeloid leukemia and myelodysplastic syndromes with multiple TP53 alterations. Lodé L, Ameur A, Coste T, ..., Lavabre-Bertrand T, Soussi T Haematologica 103 (1) e13-e16 2018-01-00 2017-10-27
Protein-altering variants associated with body mass index implicate pathways that control energy intake and expenditure in obesity. Turcot V, Lu Y, Highland HM, ..., MAGIC Investigators , Understanding Society Scientific Group Nat. Genet. 50 (1) 26-41 2018-01-00 2017-12-22
Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation. Günther T, Malmström H, Svensson EM, ..., Götherström A, Jakobsson M PLoS Biol. 16 (1) e2003703 2018-01-00 2018-01-09
Perspectives on NMR studies of CO2 adsorption Bernin D, Hedin N Current Opinion in Colloid & Interface Science 33 (-) 53-62 2018-01-00 2018-01-00
Normalization of mass spectrometry data (NOMAD). Murie C, Sandri B, Sandberg AS, ..., Wendt C, Larsson O Adv Biol Regul 67 (-) 128-133 2018-01-00 2017-11-20
Natural product inspired library synthesis - Identification of 2,3-diarylbenzofuran and 2,3-dihydrobenzofuran based inhibitors of Chlamydia trachomatis Saleeb M, Mojica S, Eriksson AU, ..., Gylfe Å, Elofsson M European Journal of Medicinal Chemistry 143 (-) 1077-1089 2018-01-00 2018-01-00
Minimizing inequality in access to precision medicine in breast cancer by real-time population-based molecular analysis in the SCAN-B initiative. Rydén L, Loman N, Larsson C, ..., Saal LH, Borg Å Br J Surg 105 (2) e158-e168 2018-01-00 2018-01-18
MicroRNA expression profiles in non‑epithelial ovarian tumors. Chang RK, Li X, Mu N, ..., Larsson C, Lui WO Int. J. Oncol. 52 (1) 55-66 2018-01-00 2017-11-10
Leucocyte recruitment and molecular fortification of keratinocytes triggered by streptococcal M1 protein. Persson ST, Hauri S, Malmström J, Herwald H Cell. Microbiol. 20 (1) - 2018-01-00 2017-10-19
Homozygosity for a missense variant in COMP gene associated with severe pseudoachondroplasia Tariq M, Khan TN, Lundin L, ..., Dahl N, Klar J Clin Genet 93 (1) 182-186 2018-01-00 2017-11-21
Herpesvirus deconjugases inhibit the IFN response by promoting TRIM25 autoubiquitination and functional inactivation of the RIG-I signalosome. Gupta S, Ylä-Anttila P, Callegari S, ..., Delecluse HJ, Masucci MG PLoS Pathog. 14 (1) e1006852 2018-01-00 2018-01-22
Genomic consequences of intensive inbreeding in an isolated wolf population Kardos M, Åkesson M, Fountain T, ..., Wikenros C, Ellegren H Nat Ecol Evol 2 (1) 124-131 2018-01-00 2017-11-20
Exome sequencing reveals NAA15 and PUF60 as candidate genes associated with intellectual disability. Zhao JJ, Halvardson J, Zander CS, ..., Thuresson AC, Feuk L Am. J. Med. Genet. B Neuropsychiatr. Genet. 177 (1) 10-20 2018-01-00 2017-10-09
Epigenetic Changes in the CRH Gene are Related to Severity of Suicide Attempt and a General Psychiatric Risk Score in Adolescents. Jokinen J, Boström AE, Dadfar A, ..., Åsberg M, Schiöth HB EBioMedicine 27 (-) 123-133 2018-01-00 2017-12-18
Complex effects of mammalian grazing on extramatrical mycelial biomass in the Scandes forest-tundra ecotone Vowles T, Lindwall F, Ekblad A, ..., Ryberg M, Björk RG Ecol Evol 8 (2) 1019-1030 2018-01-00 2017-12-14
Clofazimine protects against Mycobacterium tuberculosis dissemination in the central nervous system following aerosol challenge in a murine model. Baijnath S, Moodley C, Ngcobo B, ..., Pym A, Govender T International Journal of Antimicrobial Agents 51 (1) 77-81 2018-01-00 2017-08-24
Circulating proteins as predictors of incident heart failure in the elderly. Stenemo M, Nowak C, Byberg L, ..., Fall T, Ärnlöv J Eur. J. Heart Fail. 20 (1) 55-62 2018-01-00 2017-10-02
Characterization of gamma-tubulin filaments in mammalian cells. Lindström L, Alvarado-Kristensson M Biochimica et Biophysica Acta (BBA) - Molecular Cell Research 1865 (1) 158-171 2018-01-00 2017-10-16
Abundant recent activity of retrovirus-like retrotransposons within and among flycatcher species implies a rich source of structural variation in songbird genomes Suh A, Smeds L, Ellegren H Mol Ecol 27 (1) 99-111 2018-01-00 2017-12-12
Whole Slide Image Registration for the Study of Tumor Heterogeneity Solorzano L, Almeida GM, Mesquita B, ..., Oliveira C, Wählby C - - (-) 95-102 2018-00-00 2018-09-14
The CO<sub>2</sub>capturing ability of cellulose dissolved in NaOH(aq) at low temperature Gunnarsson M, Bernin D, Östlund Å, Hasani M Green Chem. 20 (14) 3279-3286 2018-00-00 2018-00-00
The CO2 capturing ability of cellulose dissolved in NaOH(aq) at low temperature Gunnarsson M, Bernin D, Östlund Å, Hasani M Green Chem. 20 (14) 3279-3286 2018-00-00 2018-00-00
Synthesis of novel 1,2,4-thiadiazinane 1,1-dioxides via three component SuFEx type reaction Khumalo MF, Akpan ED, Chinthakindi PK, ..., Naicker T, Arvidsson PI RSC Adv. 8 (65) 37503-37507 2018-00-00 2018-00-00
Phylogeny, species delimitation and revision of Pleioluma (Sapotaceae) in New Caledonia, a frequently gynodioecious genus Swenson U, Nylander JAA, Munzinger J Aust. Systematic Bot. 31 (2) 120 2018-00-00 2018-00-00
Orange is the new white: rapid curing of an ethylene-glycidyl methacrylate copolymer with a Ti-bisphenolate type catalyst Mauri M, Svenningsson L, Hjertberg T, ..., Prieto O, Müller C Polym. Chem. 9 (13) 1710-1718 2018-00-00 2018-00-00
Optimising methods for the recovery and quantification of di- and tripeptides in soil Jämtgård S, Robinson N, Moritz T, Colgrave ML, Schmidt S Soil Res. 56 (4) 404 2018-00-00 2018-00-00
Improved Reconstruction of Low Intensity Magnetic Resonance Spectroscopy With Weighted Low Rank Hankel Matrix Completion Guo D, Qu X IEEE Access 6 (-) 4933-4940 2018-00-00 2018-00-00
High-fidelity spectroscopy reconstruction in accelerated NMR Qu X, Qiu T, Guo D, ..., Orekhov V, Chen Z Chem. Commun. 54 (78) 10958-10961 2018-00-00 2018-00-00
High purity and viability cell separation of a bacterivorous jakobid flagellate based on a steep velocity gradient induced soft inertial force Deng P, Fu CJ, Wu Z RSC Adv. 8 (62) 35512-35520 2018-00-00 2018-00-00
Efficient C–C coupling of bio-based furanics and carbonyl compounds to liquid hydrocarbon precursors over lignosulfonate derived acidic carbocatalysts Konwar LJ, Samikannu A, Mäki-Arvela P, Mikkola JP Catal. Sci. Technol. 8 (9) 2449-2459 2018-00-00 2018-00-00
Effect of various structure directing agents (SDAs) on low-temperature deactivation of Cu/SAPO-34 during NH<sub>3</sub>-SCR reaction Woo J, Leistner K, Bernin D, ..., Zammit M, Olsson L Catal. Sci. Technol. 8 (12) 3090-3106 2018-00-00 2018-00-00
Effect of various structure directing agents (SDAs) on low-temperature deactivation of Cu/SAPO-34 during NH3-SCR reaction Woo J, Leistner K, Bernin D, ..., Zammit M, Olsson L Catal. Sci. Technol. 8 (12) 3090-3106 2018-00-00 2018-00-00
An unexpected re-arrangement of the antibiotic carbapenem core to new 1,4-diazepin-5-one scaffolds Peters BK, Razuwika R, Samipillai M, ..., Govender T, Naicker T RSC Adv. 8 (1) 190-193 2018-00-00 2018-00-00

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