Publications 2018

Title Authors Journal Published Online
Gene expression correlated with delay in shell formation in larval Pacific oysters (Crassostrea gigas) exposed to experimental ocean acidification provides insights into shell formation mechanisms De Wit P, Durland E, Ventura A, Langdon CJ BMC Genomics 19 (1) - 2018-12-00 2018-02-22
Discovery of coding regions in the human genome by integrated proteogenomics analysis workflow Zhu Y, Orre LM, ..., Branca RMM, Lehtiö J Nat Commun 9 (1) - 2018-12-00 2018-03-02
Somatic mutagenesis in satellite cells associates with human skeletal muscle aging Franco I, Johansson A, ..., Fischer H, Eriksson M Nat Commun 9 (1) - 2018-12-00 2018-02-23
A DHODH inhibitor increases p53 synthesis and enhances tumor cell killing by p53 degradation blockage Ladds MJGW, van Leeuwen IMM, ..., McCormack E, Laín S Nat Commun 9 (1) - 2018-12-00 2018-03-16
Effects of predation stress and food ration on perch gut microbiota Zha Y, Eiler A, Johansson F, Svanbäck R Microbiome 6 (1) - 2018-12-00 2018-02-06
Targeted NUDT5 inhibitors block hormone signaling in breast cancer cells Page BDG, Valerie NCK, ..., Beato M, Helleday T Nat Commun 9 (1) - 2018-12-00 2018-01-17
Linking FOXO3, NCOA3, and TCF7L2 to Ras pathway phenotypes through a genome-wide forward genetic screen in human colorectal cancer cells Kundu S, Ali MA, ..., Hellström M, Sjöblom T Genome Med 10 (1) - 2018-12-00 2018-01-04
Topology of membrane proteins — predictions, limitations and variations Tsirigos KD, Govindarajan S, ..., Shu N, Elofsson A Current Opinion in Structural Biology 50 (-) 9-17 2018-06-00 2018-06-00
Ezerskyte M, Paredes JA, ..., Scicchitano DA, Dreij K Proc. Natl. Acad. Sci. U.S.A. - (-) - 2018-04-17 2018-04-17
Active and inactive β1 integrins segregate into distinct nanoclusters in focal adhesions Spiess M, Hernandez-Varas P, ..., Lakadamyali M, Strömblad S J. Cell Biol. - (-) jcb.201707075 2018-04-09 2018-04-09
Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor Boerema AP, Aibara S, ..., Lindahl E, Amunts A NPLANTS 4 (4) 212-217 2018-04-00 2018-04-02
Identification of Poly(ADP-Ribose) Polymerase Macrodomain Inhibitors Using an AlphaScreen Protocol Ekblad T, Verheugd P, ..., Elofsson M, Schüler H SLAS DISCOVERY: Advancing Life Sciences R&D 23 (4) 353-362 2018-04-00 2018-01-09
Protein Expression in Tonsillar and Base of Tongue Cancer and in Relation to Human Papillomavirus (HPV) and Clinical Outcome Ramqvist T, Näsman A, ..., Dalianis T, Munck-Wikland E Int J Mol Sci 19 (4) 978 2018-03-25 2018-03-25
Increased thermal stability of nanocellulose composites by functionalization of the sulfate groups on cellulose nanocrystals with azetidinium ions Börjesson M, Sahlin K, Bernin D, Westman G J. Appl. Polym. Sci. 135 (10) 45963 2018-03-10 2017-11-08
The Immunogenicity of a Proline-Substituted Altered Peptide Ligand toward the Cancer-Associated TEIPP Neoepitope Trh4 Is Unrelated to Complex Stability. Hafstrand I, Doorduijn EM, ..., van Hall T, Achour A J. Immunol. - (-) - 2018-03-05 2018-03-05
Sexual dimorphism in the width of the mouse synaptonemal complex Agostinho A, Kouznetsova A, ..., Brismar H, Höög C J Cell Sci 131 (5) jcs212548 2018-03-01 2018-02-02
The fungus that came in from the cold: dry rot’s pre-adapted ability to invade buildings Balasundaram SV, Hess J, ..., Eastwood DC, Skrede I ISME J 12 (3) 791-801 2018-03-00 2018-01-05
Functional metagenomics reveals a novel carbapenem-hydrolyzing mobile beta-lactamase from Indian river sediments contaminated with antibiotic production waste Marathe NP, Janzon A, ..., Kristiansson E, Larsson DGJ Environment International 112 (-) 279-286 2018-03-00 2018-03-00
Cleaner fish escape salmon farms and hybridize with local wrasse populations Faust E, Halvorsen KT, ..., Knutsen H, André C R. Soc. open sci. 5 (3) 171752 2018-03-00 2018-03-21
The ZBED6–IGF2 axis has a major effect on growth of skeletal muscle and internal organs in placental mammals Younis S, Schönke M, ..., Zierath JR, Andersson L Proc Natl Acad Sci USA 115 (9) E2048-E2057 2018-02-27 2018-02-12
Targeted Long-Read Sequencing of a Locus Under Long-Term Balancing Selection in Capsella Bachmann JA, Tedder A, ..., Steige KA, Slotte T G3 (Bethesda) - (-) g3.300467.2017 2018-02-23 2018-02-23
In Situ Target Engagement Studies in Adherent Cells Axelsson H, Almqvist H, ..., Lundbäck T, Seashore-Ludlow B ACS Chem. Biol. - (-) - 2018-02-21 2018-02-21
Two novel colorectal cancer risk loci in the region on chromosome 9q22.32 Thutkawkorapin J, Mahdessian H, ..., Jiao X, Lindblom A Oncotarget 9 (13) - 2018-02-16 2018-01-30
Irreversible inhibition of cytosolic thioredoxin reductase 1 as a mechanistic basis for anticancer therapy. Stafford WC, Peng X, ..., Linder S, Arnér ESJ Sci Transl Med 10 (428) - 2018-02-14 2018-02-16
Educated natural killer cells show dynamic movement of the activating receptor NKp46 and confinement of the inhibitory receptor Ly49A Staaf E, Hedde PN, ..., Gratton E, Johansson S Sci. Signal. 11 (517) eaai9200 2018-02-13 2018-02-13
Kynurenic Acid and Gpr35 Regulate Adipose Tissue Energy Homeostasis and Inflammation. Agudelo LZ, Ferreira DMS, ..., Berggren P, Ruas JL Cell Metab. 27 (2) 378-392.e5 2018-02-06 2018-02-08
Ten steps to get started in Genome Assembly and Annotation Dominguez Del Angel V, Hjerde E, ..., Binzer-Panchal M, Lantz H F1000Res 7 (-) 148 2018-02-05 2018-02-05
Single molecule real-time (SMRT) sequencing comes of age: applications and utilities for medical diagnostics Ardui S, Ameur A, Vermeesch JR, Hestand MS Nucleic Acids Res - (-) - 2018-02-01 2018-02-01
Small molecule PGC-1α1 protein stabilizers induce adipocyte Ucp1 expression and uncoupled mitochondrial respiration Pettersson-Klein AT, Izadi M, ..., Griffin PR, Ruas JL Mol Metab - (-) - 2018-02-00 2018-02-00
Life after tree death: Does restored dead wood host different fungal communities to natural woody substrates? Pasanen H, Junninen K, ..., Stenlid J, Kouki J Forest Ecology and Management 409 (-) 863-871 2018-02-00 2018-02-00
Red meat intake in chronic kidney disease patients: Two sides of the coin Mafra D, Borges NA, ..., Lindholm B, Stenvinkel P Nutrition 46 (-) 26-32 2018-02-00 2018-02-00
Human NUDT22 Is a UDP-Glucose/Galactose Hydrolase Exhibiting a Unique Structural Fold Carter M, Jemth AS, ..., Helleday T, Stenmark P Structure 26 (2) 295-303.e6 2018-02-00 2018-02-00
T cells are influenced by a long non-coding RNA in the autoimmune associated PTPN2 locus Houtman M, Shchetynsky K, ..., Malmström V, Padyukov L Journal of Autoimmunity - (-) - 2018-02-00 2018-02-00
Archaeal community changes in Lateglacial lake sediments: Evidence from ancient DNA Ahmed E, Parducci L, ..., Slotte T, Wohlfarth B Quaternary Science Reviews 181 (-) 19-29 2018-02-00 2018-02-00
Molecular barcoding of viral vectors enables mapping and optimization of mRNA trans-splicing Davidsson M, Díaz-Fernández P, ..., Lundberg C, Bjorklund T RNA - (-) rna.063925.117 2018-01-31 2018-01-31
A comprehensive model of DNA fragmentation for the preservation of High Molecular Weight DNA Klingstrom T, Bongcam-Rudloff E, Vinnere Pettersson O - - (-) - 2018-01-27 2018-01-27
In Situ Analyses Directly in Diarrheal Stool Reveal Large Variations in Bacterial Load and Active Toxin Expression of Enterotoxigenic Escherichia coli and Vibrio cholerae Begum YA, Rydberg HA, ..., Qadri F, Sjöling Å mSphere 3 (1) e00517-17 2018-01-24 2018-01-24
Extensive genomic diversity among Mycobacterium marinum strains revealed by whole genome sequencing Das S, Pettersson F, ..., Ennis DG, Kirsebom L - - (-) - 2018-01-17 2018-01-17
Crystal Structures and Inhibitor Interactions of Mouse and Dog MTH1 Reveal Species-Specific Differences in Affinity Narwal M, Jemth AS, ..., Helleday T, Stenmark P Biochemistry - (-) - 2018-01-16 2018-01-16
Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D Jenjaroenpun P, Wongsurawat T, ..., Nielsen J, Nookaew I Nucleic Acids Res - (-) - 2018-01-13 2018-01-13
Rapid hybrid speciation in Darwin’s finches Lamichhaney S, Han F, ..., Grant BR, Grant PR Science 359 (6372) 224-228 2018-01-12 2017-11-23
Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation Günther T, Malmström H, ..., Götherström A, Jakobsson M PLoS Biol. 16 (1) e2003703 2018-01-09 2018-01-09
A protein interaction network centered on leucine-rich repeats and immunoglobulin-like domains 1 (LRIG1) regulates growth factor receptors Faraz M, Herdenberg C, ..., Henriksson R, Hedman H J. Biol. Chem. - (-) jbc.M117.807487 2018-01-09 2018-01-09
Evaluating vacquinol-1 in rats carrying glioblastoma models RG2 and NS1 Ahlstedt J, Förnvik K, ..., Salford LG, Redebrandt HN Oncotarget - (-) - 2018-01-03 2018-01-03
Minimizing inequality in access to precision medicine in breast cancer by real-time population-based molecular analysis in the SCAN-B initiative. Rydén L, Loman N, ..., Saal LH, Borg Å Br J Surg 105 (2) e158-e168 2018-01-00 2018-01-18
Protein-altering variants associated with body mass index implicate pathways that control energy intake and expenditure in obesity Turcot V, None , ..., None , None Nat Genet 50 (1) 26-41 2018-01-00 2017-12-22
Genomic consequences of intensive inbreeding in an isolated wolf population Kardos M, Åkesson M, ..., Wikenros C, Ellegren H Nat Ecol Evol 2 (1) 124-131 2018-01-00 2017-11-20
The SubCons webserver: A user friendly web interface for state-of-the-art subcellular localization prediction. Salvatore M, Shu N, Elofsson A Protein Sci. 27 (1) 195-201 2018-01-00 2017-10-24
Single-molecule DNA sequencing of acute myeloid leukemia and myelodysplastic syndromes with multiple TP53 alterations Lodé L, Ameur A, ..., Lavabre-Bertrand T, Soussi T Haematologica 103 (1) e13-e16 2018-01-00 2017-10-27
Homozygosity for a missense variant in COMP gene associated with severe pseudoachondroplasia Tariq M, Khan TN, ..., Dahl N, Klar J Clin Genet 93 (1) 182-186 2018-01-00 2017-11-21