Ancient DNA

Estimating allele frequencies, ancestry proportions and genotype likelihoods in the presence of mapping bias

Günther T, Goldberg A, Schraiber JG

G3 (Bethesda) 15 (10) - [2025-10-08; online 2025-07-30]

Ancient DNA [Collaborative]

Metaaltijden (vol. 12). Bijdragen in de studie van de metaaltijden: The role of elk (Alces alces) in the Dutch Bronze Age

Brusgaard N, Aal J, van Dijk J

- - (-) - [2025-10-00; online 2025-10-00]

Gone With the Wind: Exploring a Vanished Rock Dove, Columba livia, Hybrid Zone in the Sahara Desert.

Hernández-Alonso G, van Grouw H, Farahani MF, Günther T

Ecol Evol 15 (9) e72061 [2025-09-00; online 2025-08-27]

Ancient DNA [Service] Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Revised phylogeny of mouflon based on expanded sampling of mitogenomes.

Mereu P, Pirastru M, Morell Miranda P, ..., Günther T, Leoni GG

PLoS ONE 20 (5) e0323354 [2025-05-14; online 2025-05-14]

Ancient DNA [Service] Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Vikby – gård, gravar och gårdsritualer i Täby

Hamilton J, Lindberg M, Andersson L, ..., Magnell O, Plikk A

Uppdragsarkeologiska rapporter, diarenummer 431-2360-2020 - (-) - [2025-05-02; online 2025-05-02]

Ancient DNA [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Museum Ecologies

Fredengren C, Ewing A, Owman C, Holmstedt J

Mus. Soc. 23 (1) - [2025-05-01; online 2025-05-01]

Historic manioc genomes illuminate maintenance of diversity under long-lived clonal cultivation.

Kistler L, de Oliveira Freitas F, Gutaker RM, ..., Capriles JM, Allaby RG

Science 387 (6738) eadq0018 [2025-03-07; online 2025-03-07]

Ancient DNA [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) National Genomics Infrastructure [Service]

Modelling age at death reveals Nordic Corded Ware paleodemography

Tornberg A, Vandkilde H

Archaeol Anthropol Sci 17 (2) - [2025-02-00; online 2025-01-20]

Ancient DNA [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Järn och gravar i Våmb

Gustafsson J, Nordman A, Hjärthner-Holdar E, Stilborg O

Jönköping läns museum arkeologisk rapport 2024:07 - (-) - [2024-11-15]

Equid-human interactions in Medieval Rome: exploring the role and management of equids through an interdisciplinary approach

Claudia Minniti CCAMaDC

30th conference of the European Association of Archaeologists, session 3893 - (-) - [2024-11-11; online 2024-08-27]

The Population History of Domestic Sheep Revealed by Paleogenomes.

Kaptan D, Atağ G, Vural KB, ..., Somel M, Özer F

Mol. Biol. Evol. 41 (10) - [2024-10-04; online 2024-10-23]

Ancient DNA [Service] NGI Other [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

Sex estimation using long bones in the largest burial site of the Copper Age: Linear discriminant analysis and random forest

Díaz-Navarro S, Díez-Hermano S, Rojo-Guerra MA, ..., Gunther T, Uriarte MH

Journal of Archaeological Science: Reports 58 (-) 104730 [2024-10-00; online 2024-10-00]

New finds of European bison identified through the systematic DNA-based species identification of archaeological remains of large bovines from Scandinavia

Rosengren E, Rossi C, Heino MT, Sinding MHS

Journal of Archaeological Science: Reports 57 (-) 104668 [2024-09-00; online 2024-09-00]

Five centuries of consanguinity, isolation, health, and conflict in Las Gobas: A Northern Medieval Iberian necropolis.

Rodríguez-Varela R, Yaka R, Pochon Z, ..., Azkarate A, Götherström A

Sci Adv 10 (35) eadp8625 [2024-08-30; online 2024-08-28]

Ancient DNA [Collaborative] Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

READv2: advanced and user-friendly detection of biological relatedness in archaeogenomics.

Alaçamlı E, Naidoo T, Güler MN, ..., Malmström H, Günther T

Genome Biol. 25 (1) 216 [2024-08-12; online 2024-08-12]

Ancient DNA [Technology development] Bioinformatics Support for Computational Resources [Service]

Ancient Sheep Genomes Reveal Four Millennia of North European Short-Tailed Sheep in the Baltic Sea Region.

Larsson MNA, Morell Miranda P, Pan L, ..., Storå J, Günther T

Genome Biol Evol 16 (6) - [2024-06-04; online 2024-05-25]

Ancient DNA [Service] Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Following the herd: Population genetics of European sheep in time and space

Morell Miranda P

Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology - (-) - [2023-11-14; online 2023-11-14]

aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow.

Pochon Z, Bergfeldt N, Kırdök E, ..., Unneberg P, Oskolkov N

Genome Biol. 24 (1) 242 [2023-10-23; online 2023-10-23]

Ancient DNA [Technology development] Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

Polymorphic parasitic larvae cooperate to build swimming colonies luring hosts.

Krupenko D, Miroliubov A, Kryukov E, ..., Kastriti ME, Adameyko I

Curr. Biol. 33 (20) 4524-4531.e4 [2023-10-23; online 2023-09-22]

Ancient DNA [Collaborative] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Ancient Sheep Genomes reveal four Millennia of North European Short-Tailed Sheep in the Baltic Sea region

Larsson MN, Miranda PM, Pan L, ..., Storå J, Günther T

bioRxiv - (-) - [2023-06-26; online 2023-06-26]

Ancient DNA [Service] Bioinformatics Support for Computational Resources [Service]

Gåtfulla Gårdby: kyrkor, skelett och DNA berättar om en öländsk socken

Ahlström Arcini C, Hedvall R

- - (-) - [2022-08-28]

Guve, Ygle och Rane DNA-analyser löser frågan om släktskap

Arcini C, Hedvall R

Arkeologi i Östergötland - (1) 46-47 [2021-06-14]

Ygle, Guve och Rane i Skänninge DNA-analyser löste frågan om deras släktskap

Ahlström Arcini C, Hedvall R, Lundgren M

Fornvännen 115 (4) 274-278 [2021-01-12]