Structural Proteomics

SciLifeLab Infrastructure Unit Since 2021. Previously called "Targeted and Structural Proteomics".

Primary: Shown in the list of current labels, if end date is not specified.

Started: 2021

Ended: Current

Year 2023

Frequent use of IGHV3-30-3 in SARS-CoV-2 neutralizing antibody responses.
Pushparaj P, Nicoletto A, Dopico XC, ..., Corcoran M, Karlsson Hedestam GB
Front Virol 3 (-) 1128253 [2023-03-01; online 2023-04-13]
Structural Proteomics [Collaborative]
Immunoglobulin germline gene polymorphisms influence the function of SARS-CoV-2 neutralizing antibodies.
Pushparaj P, Nicoletto A, Sheward DJ, ..., Corcoran M, Karlsson Hedestam GB
Immunity 56 (1) 193-206.e7 [2023-01-10; online 2022-12-12]
Structural Proteomics [Collaborative]

Year 2022

Year 2021

Streptococcus pyogenes Forms Serotype- and Local Environment-Dependent Interspecies Protein Complexes.
Chowdhury S, Khakzad H, Bergdahl GE, ..., Happonen L, Malmström J
mSystems 6 (5) e0027121 [2021-10-26; online 2021-09-28]
Structural Proteomics [Collaborative]
(p)ppGpp controls stringent factors by exploiting antagonistic allosteric coupling between catalytic domains.
Roghanian M, Van Nerom K, Takada H, ..., Garcia-Pino A, Hauryliuk V
Mol. Cell 81 (16) 3310-3322.e6 [2021-08-19; online 2021-08-21]
Structural Proteomics [Collaborative]
In vivo Cross-Linking MS of the Complement System MAC Assembled on Live Gram-Positive Bacteria.
Khakzad H, Happonen L, Tran Van Nhieu G, Malmström J, Malmström L
Front Genet 11 (-) 612475 [2021-01-08; online 2021-01-08]
Structural Proteomics [Collaborative]

Year 2020

Year 2019

Identification of two abundant Aerococcus urinae cell wall-anchored proteins.
Senneby E, Sunnerhagen T, Hallström B, ..., Karlsson C, Rasmussen M
Int. J. Med. Microbiol. 309 (7) 151325 [2019-11-00; online 2019-06-24]
Structural Proteomics [Collaborative]
Matrisome Properties of Scaffolds Direct Fibroblasts in Idiopathic Pulmonary Fibrosis.
Elowsson Rendin L, Löfdahl A, Åhrman E, ..., Malmström J, Westergren-Thorsson G
Int J Mol Sci 20 (16) - [2019-08-17; online 2019-08-17]
Structural Proteomics [Collaborative]
Clinical protein science in translational medicine targeting malignant melanoma.
Gil J, Betancourt LH, Pla I, ..., Malm J, Marko-Varga G
Cell Biol. Toxicol. 35 (4) 293-332 [2019-08-00; online 2019-03-21]
Structural Proteomics [Service]
Streptococcus pyogenes evades adaptive immunity through specific IgG glycan hydrolysis.
Naegeli A, Bratanis E, Karlsson C, ..., Malmström J, Collin M
J. Exp. Med. 216 (7) 1615-1629 [2019-07-01; online 2019-05-15]
Structural Proteomics [Collaborative]
Structural Basis for YjbH Adaptor-Mediated Recognition of Transcription Factor Spx.
Awad W, Al-Eryani Y, Ekström S, Logan DT, von Wachenfeldt C
Structure 27 (6) 923-936.e6 [2019-06-04; online 2019-04-11]
Structural Proteomics [Collaborative]

Year 2018

Pseudouridylation of tRNA-Derived Fragments Steers Translational Control in Stem Cells.
Guzzi N, Cieśla M, Ngoc PCT, ..., Hsieh AC, Bellodi C
Cell 173 (5) 1204-1216.e26 [2018-05-17; online 2018-04-05]
Structural Proteomics [Service]
Allele-selective RUNX1 binding regulates P1 blood group status by transcriptional control of A4GALT.
Westman JS, Stenfelt L, Vidovic K, ..., Kjellström S, Olsson ML
Blood 131 (14) 1611-1616 [2018-04-05; online 2018-02-08]
Structural Proteomics [Service]
Proteomic analyses identify prognostic biomarkers for pancreatic ductal adenocarcinoma.
Hu D, Ansari D, Pawłowski K, ..., Marko-Varga G, Andersson R
Oncotarget 9 (11) 9789-9807 [2018-02-09; online 2018-01-03]
Structural Proteomics [Service]

Year 2017

Quantitative proteomic characterization of lung-MSC and bone marrow-MSC using DIA-mass spectrometry.
Rolandsson Enes S, Åhrman E, Palani A, ..., Malmström J, Westergren-Thorsson G
Sci Rep 7 (1) 9316 [2017-08-24; online 2017-08-24]
Structural Proteomics [Service]
Epitope mapping of a new anti-Tn antibody detecting gastric cancer cells.
Persson N, Stuhr-Hansen N, Risinger C, ..., Jansson B, Blixt O
Glycobiology 27 (7) 635-645 [2017-07-01; online 2017-04-19]
Structural Proteomics [Service]
Correlation of histopathologic characteristics to protein expression and function in malignant melanoma.
Welinder C, Pawłowski K, Szasz AM, ..., Wieslander E, Marko-Varga G
PLoS ONE 12 (4) e0176167 [2017-04-26; online 2017-04-26]
Structural Proteomics [Service]

Year 2016

Exploring structure and interactions of the bacterial adaptor protein YjbH by crosslinking mass spectrometry.
Al-Eryani Y, Ib Rasmussen M, Kjellström S, ..., Emanuelsson C, von Wachenfeldt C
Proteins 84 (9) 1234-1245 [2016-09-00; online 2016-06-15]
Structural Proteomics [Service]
Intra-tumour IgA1 is common in cancer and is correlated with poor prognosis in bladder cancer.
Welinder C, Jirström K, Lehn S, ..., Danielsson L, Jansson B
Heliyon 2 (8) e00143 [2016-08-00; online 2016-08-16]
Structural Proteomics [Service]
Hypoxia regulates global membrane protein endocytosis through caveolin-1 in cancer cells.
Bourseau-Guilmain E, Menard JA, Lindqvist E, ..., Welinder C, Belting M
Nat Commun 7 (-) 11371 [2016-04-20; online 2016-04-20]
Structural Proteomics [Service]
Elucidating the Molecular Composition of Cartilage by Proteomics.
Hsueh MF, Khabut A, Kjellström S, Önnerfjord P, Kraus VB
J. Proteome Res. 15 (2) 374-388 [2016-02-05; online 2016-01-15]
Structural Proteomics [Service]

Publications 9.5.0