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2019 (727)
2018 (651)
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Sci Data
JSON
ISSN
2052-4463
ISSN-L
2052-4463
IUID
4b1a5e2641b94b09bd8955e93907a2fb
Modified
2020-11-27T13:14:08.930Z
Created
2017-05-09T09:12:49.641Z
Year 2024
PubMed
DOI
Crossref
Chromosome-level genome assembly of the morabine grasshopper Vandiemenella viatica19.
Li X
, Jayaprasad S,
Einarsdottir E
, ..., Kawakami T,
Palacios-Gimenez OM
Sci Data
11
(1) 997 [2024-09-12; online 2024-09-12]
NGI Long read [Service]
NGI Other [Service]
NGI Short read [Service]
NGI Stockholm (Genomics Production) [Collaborative]
NGI Uppsala (Uppsala Genome Center) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Chromosome-level genome assembly and annotation of the social amoeba Dictyostelium firmibasis.
Edelbroek B
,
Kjellin J
, Jerlström-Hultqvist J, Koskiniemi S,
Söderbom F
Sci Data
11
(1) 678 [2024-06-22; online 2024-06-22]
NGI Short read [Service]
NGI Uppsala (SNP&SEQ Technology Platform) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Integrative transcriptomic and proteomic profiling of the effects of cell confluency on gene expression.
Lobo V, Shcherbinina E, Westholm JO, ..., Anastasakis DG,
Sarshad AA
Sci Data
11
(1) 617 [2024-06-12; online 2024-06-12]
Bioinformatics Long-term Support WABI [Collaborative]
Bioinformatics Support, Infrastructure and Training [Collaborative]
NGI Short read [Service]
NGI Uppsala (SNP&SEQ Technology Platform) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
A comprehensive dataset on spatiotemporal variation of microbial plankton communities in the Baltic Sea.
Latz MAC
, Andersson A, Brugel S, ...,
Torstensson A
,
Andersson AF
Sci Data
11
(1) 18 [2024-01-02; online 2024-01-02]
Bioinformatics Long-term Support WABI [Service]
Bioinformatics Support, Infrastructure and Training [Service]
NGI Short read [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
Year 2023
PubMed
DOI
Crossref
Haplotype-resolved genome of heterozygous African cassava cultivar TMEB117 (Manihot esculenta).
Landi M
,
Shah T
,
Falquet L
, ...,
Bongcam-Rudloff E
,
Gisel A
Sci Data
10
(1) 887 [2023-12-09; online 2023-12-09]
Bioinformatics Support and Infrastructure [Collaborative]
Bioinformatics Support, Infrastructure and Training [Collaborative]
NGI Long read [Service]
NGI Uppsala (SNP&SEQ Technology Platform) [Service]
NGI Uppsala (Uppsala Genome Center) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Shotgun metagenomes from productive lakes in an urban region of Sweden.
Rodríguez-Gijón A
,
Hampel JJ
,
Dharamshi J
,
Bertilsson S
,
Garcia SL
Sci Data
10
(1) 810 [2023-11-17; online 2023-11-17]
Bioinformatics Support for Computational Resources [Service]
NGI Short read [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
Year 2022
PubMed
DOI
Crossref
Mountain- and brown hare genetic polymorphisms to survey local adaptations and conservation status of the heath hare (Lepus timidus sylvaticus, Nilsson 1831).
Michell CT,
Pohjoismäki JLO
, Spong G, Thulin CG
Sci Data
9
(1) 667 [2022-11-03; online 2022-11-03]
NGI Short read [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
A chromosome-scale reference genome for Spironucleus salmonicida.
Xu F
,
Jiménez-González A
, Kurt Z, ...,
Andersson JO
, Svärd SG
Sci Data
9
(1) 585 [2022-09-24; online 2022-09-24]
NGI Long read [Service]
NGI Uppsala (Uppsala Genome Center) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Inflation of test accuracy due to data leakage in deep learning-based classification of OCT images.
Tampu IE
,
Eklund A
,
Haj-Hosseini N
Sci Data
9
(1) 580 [2022-09-22; online 2022-09-22]
AIDA Data Hub [Service]
PubMed
DOI
Crossref
An atlas of endogenous DNA double-strand breaks arising during human neural cell fate determination.
Ballarino R
,
Bouwman BAM
,
Agostini F
, ..., Bienko M,
Crosetto N
Sci Data
9
(1) 400 [2022-07-12; online 2022-07-12]
NGI Short read [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Simultaneous visualization of DNA loci in single cells by combinatorial multi-color iFISH.
Mota A
, Schweitzer M, Wernersson E,
Crosetto N
, Bienko M
Sci Data
9
(1) 47 [2022-02-10; online 2022-02-10]
Spatial Proteomics [Technology development]
Year 2021
PubMed
DOI
Crossref
Insights into the changes in the proteome of Alzheimer disease elucidated by a meta-analysis.
Haytural H
, Benfeitas R, Schedin-Weiss S, ..., Frykman S,
Tjernberg LO
Sci Data
8
(1) 312 [2021-12-03; online 2021-12-03]
Bioinformatics Support and Infrastructure [Collaborative]
Bioinformatics Support for Computational Resources [Service]
Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed
DOI
Crossref
Whole genome and exome sequencing reference datasets from a multi-center and cross-platform benchmark study.
Zhao Y
,
Fang LT
, Shen T, ...,
Hong H
,
Xiao W
Sci Data
8
(1) 296 [2021-11-09; online 2021-11-09]
NGI Uppsala (SNP&SEQ Technology Platform) [Collaborative]
National Genomics Infrastructure [Collaborative]
PubMed
DOI
Crossref
Community composition of aquatic fungi across the thawing Arctic.
Kluge M
, Wurzbacher C,
Wauthy M
, ...,
Stenlid J
, Peura S
Sci Data
8
(1) 221 [2021-08-19; online 2021-08-19]
Bioinformatics Support for Computational Resources [Service]
NGI Uppsala (Uppsala Genome Center) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds.
Buck M,
Garcia SL
, Fernandez L, ...,
Bertilsson S
,
Peura S
Sci Data
8
(1) 131 [2021-05-14; online 2021-05-14]
Bioinformatics Support for Computational Resources [Service]
NGI Uppsala (SNP&SEQ Technology Platform) [Service]
National Genomics Infrastructure [Service]
Year 2020
PubMed
DOI
Crossref
Key insights in the AIDA community policy on sharing of clinical imaging data for research in Sweden.
Hedlund J
,
Eklund A
,
Lundström C
Sci Data
7
(1) 331 [2020-10-06; online 2020-10-06]
AIDA Data Hub [Service]
PubMed
DOI
Crossref
Systems biology of acidophile biofilms for efficient metal extraction.
Buetti-Dinh A, Herold M, Christel S, ..., Pivkin IV,
Dopson M
Sci Data
7
(1) 215 [2020-07-07; online 2020-07-07]
Bioinformatics Support for Computational Resources [Service]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Transcriptomic resources for evolutionary studies in flat periwinkles and related species.
Marques JP
, Sotelo G, Galindo J, ..., Hollander J, Faria R
Sci Data
7
(1) 73 [2020-03-03; online 2020-03-03]
NGI Uppsala (SNP&SEQ Technology Platform) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
A chromosome-scale reference genome for Giardia intestinalis WB.
Xu F
, Jex A, Svärd SG
Sci Data
7
(1) 38 [2020-02-04; online 2020-02-04]
NGI Uppsala (Uppsala Genome Center) [Service]
National Genomics Infrastructure [Service]
Year 2019
PubMed
DOI
Crossref
Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials.
Högfors-Rönnholm E, Lopez-Fernandez M, Christel S, ..., Engblom S, Dopson M
Sci Data
6
(1) 207 [2019-10-16; online 2019-10-16]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
Year 2018
PubMed
DOI
Crossref
Single-cell RNA sequencing of mouse brain and lung vascular and vessel-associated cell types.
He L, Vanlandewijck M, Mäe MA, ..., Lendahl U, Betsholtz C
Sci Data
5
(1) 180160 [2018-08-21; online 2018-08-21]
Bioinformatics Support for Computational Resources [Service]
Eukaryotic Single Cell Genomics (ESCG) [Service]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea.
Alneberg J, Sundh J, Bennke C, ..., Labrenz M, Andersson AF
Sci Data
5
(-) 180146 [2018-07-31; online 2018-07-31]
Bioinformatics Support for Computational Resources [Service]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
Year 2016
PubMed
DOI
Crossref
A microarray whole-genome gene expression dataset in a rat model of inflammatory corneal angiogenesis.
Mukwaya A,
Lindvall JM
, Xeroudaki M, ..., Jensen LD, Lagali N
Sci Data
3
(-) 160103 [2016-11-22; online 2016-11-22]
Bioinformatics Support and Infrastructure [Collaborative]
Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed
DOI
Crossref
The FAIR Guiding Principles for scientific data management and stewardship.
Wilkinson MD, Dumontier M, Aalbersberg IJ, ..., Zhao J, Mons B
Sci Data
3
(-) 160018 [2016-03-15; online 2016-03-15]
Bioinformatics Support and Infrastructure [Collaborative]
Bioinformatics Support, Infrastructure and Training [Collaborative]
SciLifeLab Data Centre
Publications
9.5.1