Int J Mol Sci

ISSN	1661-6596
ISSN-L	1422-0067
IUID	fc49d50b3d054325813a21ea47c3d9f9
Modified	2020-11-27T13:14:06.330Z
Created	2017-05-09T09:12:40.273Z

PubMed DOI Crossref

Exposure of Colon-Derived Epithelial Monolayers to Fecal Luminal Factors from Patients with Colon Cancer and Ulcerative Colitis Results in Distinct Gene Expression Patterns.

Magnusson MK, Bas Forsberg A, Verveda A, ..., Simrén M, Öhman L

Int J Mol Sci 25 (18) - [2024-09-13; online 2024-09-13]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Chalmers Mass Spectrometry Infrastructure [Collaborative]

PubMed DOI Crossref

Enrichment of Cis-Acting Regulatory Elements in Differentially Methylated Regions Following Lipopolysaccharide Treatment of Bovine Endometrial Epithelial Cells.

Jhamat N, Guo Y, Han J, ..., Andersson G, Niazi A

Int J Mol Sci 25 (18) - [2024-09-11; online 2024-09-11]

NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

The Crosstalk Analysis between mPSCs and Panc1 Cells Identifies CCN1 as a Positive Regulator of Gemcitabine Sensitivity in Pancreatic Cancer Cells.

Gündel B, Liu X, Pfützenreuter A, ..., Löhr JM, Heuchel R

Int J Mol Sci 25 (17) - [2024-08-29; online 2024-08-29]

CRISPR Functional Genomics [Service]

PubMed DOI Crossref

From SARS-CoV-2 to Global Preparedness: A Graphical Interface for Standardised High-Throughput Bioinformatics Analysis in Pandemic Scenarios and Surveillance of Drug Resistance.

Cumlin T, Karlsson I, Haars J, ..., Ladenvall C, Kaden R

Int J Mol Sci 25 (12) - [2024-06-17; online 2024-06-17]

Clinical Genomics [Technology development] Clinical Genomics Uppsala [Technology development]

PubMed DOI Crossref

Intestinal Ketogenesis and Permeability.

Casselbrant A, Elias E, Hallersund P, ..., Fändriks L, Wallenius V

Int J Mol Sci 25 (12) - [2024-06-14; online 2024-06-14]

Integrated Microscopy Technologies Gothenburg [Service]

PubMed DOI Crossref

Treatment Monitoring of a Patient with Synchronous Metastatic Angiosarcoma and Breast Cancer Using ctDNA.

Vannas C, Escobar M, Österlund T, ..., Fagman H, Ståhlberg A

Int J Mol Sci 25 (7) - [2024-04-04; online 2024-04-04]

NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Inhibition of Insulin-Regulated Aminopeptidase by Imidazo [1,5-α]pyridines-Synthesis and Evaluation.

Engen K, Lundbäck T, Yadav A, ..., Hallberg M, Larhed M

Int J Mol Sci 25 (5) - [2024-02-21; online 2024-02-21]

Chemical Biology Consortium Sweden (CBCS) [Collaborative]

PubMed DOI Crossref

MicroRNAs as Plasma Biomarkers of Hepatocellular Carcinoma in Patients with Liver Cirrhosis-A Cross-Sectional Study.

Zenlander R, Salter H, Gilg S, Eggertsen G, Stål P

Int J Mol Sci 25 (4) - [2024-02-19; online 2024-02-19]

Bioinformatics Support for Computational Resources [Service]

PubMed DOI Crossref

Secretome Analyses Identify FKBP4 as a GBA1-Associated Protein in CSF and iPS Cells from Parkinson's Disease Patients with GBA1 Mutations.

Kojima R, Paslawski W, Lyu G, ..., Zhang X, Svenningsson P

Int J Mol Sci 25 (1) - [2024-01-04; online 2024-01-04]

Affinity Proteomics Stockholm [Service]

PubMed DOI Crossref

Astrocytic Regulation of Endocannabinoid-Dependent Synaptic Plasticity in the Dorsolateral Striatum.

Adermark L, Stomberg R, Söderpalm B, Ericson M

Int J Mol Sci 25 (1) - [2024-01-01; online 2024-01-01]

Integrated Microscopy Technologies Gothenburg [Service]

PubMed DOI Crossref

Autoantibody Profiling and Anti-Kinesin Reactivity in ANCA-Associated Vasculitis.

Mescia F, Bayati S, Brouwer E, ..., Nilsson P, Pin E

Int J Mol Sci 24 (20) - [2023-10-19; online 2023-10-19]

Autoimmunity and Serology Profiling [Collaborative]

PubMed DOI Crossref

Identification of Novel Glycans in the Mucus Layer of Shark and Skate Skin.

Bachar-Wikstrom E, Thomsson KA, Sihlbom C, ..., Lindén SK, Wikstrom JD

Int J Mol Sci 24 (18) - [2023-09-20; online 2023-09-20]

Glycoproteomics and MS Proteomics [Collaborative]

PubMed DOI Crossref

Amyloids of α-Synuclein Promote Chemical Transformations of Neuronal Cell Metabolites.

Horvath I, Mohamed KA, Kumar R, Wittung-Stafshede P

Int J Mol Sci 24 (16) - [2023-08-16; online 2023-08-16]

Swedish Metabolomics Centre (SMC) [Service]

PubMed DOI Crossref

DNA Methylation Signatures of Multiple Sclerosis Occur Independently of Known Genetic Risk and Are Primarily Attributed to B Cells and Monocytes.

Xavier A, Maltby VE, Ewing E, ..., Lea RA, Lechner-Scott J

Int J Mol Sci 24 (16) - [2023-08-08; online 2023-08-08]

NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

A Longitudinal Study of Individual Radiation Responses in Pediatric Patients Treated with Proton and Photon Radiotherapy, and Interventional Cardiology: Rationale and Research Protocol of the HARMONIC Project.

Andreassi MG, Haddy N, Harms-Ringdahl M, ..., Fuentes M, Haghdoost S

Int J Mol Sci 24 (9) - [2023-05-08; online 2023-05-08]

Affinity Proteomics Stockholm [Collaborative]

PubMed DOI Crossref

Autoantibodies against PIP4K2B and AKT3 Are Associated with Skin and Lung Fibrosis in Patients with Systemic Sclerosis.

Geroldinger-Simić M, Bayati S, Pohjanen E, ..., Nilsson P, Pin E

Int J Mol Sci 24 (6) - [2023-03-15; online 2023-03-15]

Autoimmunity and Serology Profiling [Collaborative]

PubMed DOI Crossref

Venetoclax-Resistant T-ALL Cells Display Distinct Cancer Stem Cell Signatures and Enrichment of Cytokine Signaling.

Shah K, Al Ashiri L, Nasimian A, Ahmed M, Kazi JU

Int J Mol Sci 24 (5) - [2023-03-05; online 2023-03-05]

Clinical Genomics [Service] Clinical Genomics Lund [Service]

PubMed DOI Crossref

miRNome and Proteome Profiling of Human Keratinocytes and Adipose Derived Stem Cells Proposed miRNA-Mediated Regulations of Epidermal Growth Factor and Interleukin 1-Alpha.

Shahin H, Abdallah S, Das J, ..., Elmasry M, El-Serafi AT

Int J Mol Sci 24 (5) - [2023-03-04; online 2023-03-04]

Clinical Genomics [Collaborative] Clinical Genomics Linköping [Collaborative]

PubMed DOI Crossref

Conformational Dynamics of Phytoglobin BvPgb1.2 from Beta vulgaris ssp. vulgaris.

Christensen S, Stenström O, Akke M, Bülow L

Int J Mol Sci 24 (4) - [2023-02-16; online 2023-02-16]

Swedish NMR Centre (SNC) [Service]

PubMed DOI Crossref

Matched Analyses of Brain Metastases versus Primary Non-Small Cell Lung Cancer Reveal a Unique microRNA Signature.

Tsakonas G, Koulouris A, Kazmierczak D, ..., Hydbring P, Ekman S

Int J Mol Sci 24 (1) - [2022-12-22; online 2022-12-22]

Clinical Genomics [Collaborative] Clinical Genomics Uppsala [Collaborative]

PubMed DOI Crossref

Fecal Luminal Factors from Patients with Gastrointestinal Diseases Alter Gene Expression Profiles in Caco-2 Cells and Colonoids.

Holst LM, Iribarren C, Sapnara M, ..., Magnusson MK, Öhman L

Int J Mol Sci 23 (24) - [2022-12-07; online 2022-12-07]

Chalmers Mass Spectrometry Infrastructure [Collaborative]

PubMed DOI Crossref

Liver Graft Proteomics Reveals Potential Incipient Mechanisms behind Early Renal Dysfunction after Liver Transplantation.

Norén Å, Oltean M, Friman S, ..., Herlenius G, Thorsell A

Int J Mol Sci 23 (19) - [2022-10-08; online 2022-10-08]

Glycoproteomics and MS Proteomics [Collaborative]

PubMed DOI Crossref

Colitis Induces Sex-Specific Intestinal Transcriptomic Responses in Mice.

Hases L, Birgersson M, Indukuri R, Archer A, Williams C

Int J Mol Sci 23 (18) - [2022-09-08; online 2022-09-08]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Multi-Omic Investigations of a 17-19 Translocation Links MINK1 Disruption to Autism, Epilepsy and Osteoporosis.

Eisfeldt J, Schuy J, Stattin EL, ..., Feuk L, Lindstrand A

Int J Mol Sci 23 (16) - [2022-08-20; online 2022-08-20]

Bioinformatics Support for Computational Resources [Service] NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Validated Growth Rate-Dependent Regulation of Lipid Metabolism in Yarrowia lipolytica.

Poorinmohammad N, Fu J, Wabeke B, Kerkhoven EJ

Int J Mol Sci 23 (15) - [2022-07-31; online 2022-07-31]

Glycoproteomics and MS Proteomics [Service]

PubMed DOI Crossref

Challenges in Analyzing Functional Epigenetic Data in Perspective of Adolescent Psychiatric Health.

Manu DM, Mwinyi J, Schiöth HB

Int J Mol Sci 23 (10) - [2022-05-23; online 2022-05-23]

NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Quantitative Analysis of the Transcriptome of Two Commonly Used Human Monocytic Cell Lines-THP-1 and Mono Mac 6-Reveals Their Arrest during Early Monocyte/Neutrophil Differentiation.

Akula S, Lara S, Olsson AK, Hellman L

Int J Mol Sci 23 (10) - [2022-05-22; online 2022-05-22]

NGI Short read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Combined Transcriptomic and Protein Array Cytokine Profiling of Human Stem Cells from Dental Apical Papilla Modulated by Oral Bacteria.

Zymovets V, Razghonova Y, Rakhimova O, ..., Landström M, Romani Vestman N

Int J Mol Sci 23 (9) 5098 [2022-05-03; online 2022-05-03]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

Glycoproteomic and Phenotypic Elucidation of B4GALNT2 Expression Variants in the SID Histo-Blood Group System.

Stenfelt L, Nilsson J, Hellberg Å, ..., Larson G, Olsson ML

Int J Mol Sci 23 (7) - [2022-04-01; online 2022-04-01]

Glycoproteomics and MS Proteomics [Collaborative]

PubMed DOI Crossref

Structural Analysis of the Black-Legged Tick Saliva Protein Salp15.

Chaves-Arquero B, Persson C, Merino N, ..., Anguita J, Blanco FJ

Int J Mol Sci 23 (6) - [2022-03-15; online 2022-03-15]

Swedish NMR Centre (SNC) [Collaborative]

PubMed DOI Crossref

The Value of Whole-Genome Sequencing for Mitochondrial DNA Population Studies: Strategies and Criteria for Extracting High-Quality Mitogenome Haplotypes.

Sturk-Andreaggi K, Ring JD, Ameur A, ..., Marshall C, Allen M

Int J Mol Sci 23 (4) - [2022-02-17; online 2022-02-17]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]

PubMed DOI Crossref

Transcriptome Analysis of an Aedes albopictus Cell Line Single- and Dual-Infected with Lammi Virus and WNV.

Öhlund P, Delhomme N, Hayer J, Hesson JC, Blomström AL

Int J Mol Sci 23 (2) - [2022-01-14; online 2022-01-14]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

TRAPing Ghrelin-Activated Circuits: A Novel Tool to Identify, Target and Control Hormone-Responsive Populations in TRAP2 Mice.

Stoltenborg I, Peris-Sampedro F, Schéle E, ..., Adan RAH, Dickson SL

Int J Mol Sci 23 (1) - [2022-01-05; online 2022-01-05]

Integrated Microscopy Technologies Gothenburg [Service]

PubMed DOI Crossref

Loss of SDHB Induces a Metabolic Switch in the hPheo1 Cell Line toward Enhanced OXPHOS.

Tabebi M, Kumar Dutta R, Skoglund C, Söderkvist P, Gimm O

Int J Mol Sci 23 (1) - [2022-01-05; online 2022-01-05]

Clinical Genomics [Service] Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Localization and Absolute Quantification of Dopamine in Discrete Intravesicular Compartments Using NanoSIMS Imaging.

Rabasco S, Nguyen TDK, Gu C, ..., Phan NTN, Ewing AG

Int J Mol Sci 23 (1) - [2021-12-23; online 2021-12-23]

Integrated Microscopy Technologies Gothenburg [Service]

PubMed DOI Crossref

Leaf Apoplast of Field-Grown Potato Analyzed by Quantitative Proteomics and Activity-Based Protein Profiling.

Abreha KB, Alexandersson E, Resjö S, ..., Levander F, Andreasson E

Int J Mol Sci 22 (21) - [2021-11-06; online 2021-11-06]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

Silica Particles Trigger the Exopolysaccharide Production of Harsh Environment Isolates of Growth-Promoting Rhizobacteria and Increase Their Ability to Enhance Wheat Biomass in Drought-Stressed Soils.

Fetsiukh A, Conrad J, Bergquist J, Timmusk S

Int J Mol Sci 22 (12) 6201 [2021-06-08; online 2021-06-08]

Cryo-EM [Collaborative]

PubMed DOI Crossref

Immune-Associated Proteins Are Enriched in Lung Tissue-Derived Extracellular Vesicles during Allergen-Induced Eosinophilic Airway Inflammation.

Lässer C, Kishino Y, Park KS, ..., Rådinger M, Lötvall J

Int J Mol Sci 22 (9) - [2021-04-29; online 2021-04-29]

Glycoproteomics and MS Proteomics [Service]

PubMed DOI Crossref

Live Cell FRET Imaging Reveals Amyloid β-Peptide Oligomerization in Hippocampal Neurons.

Gao Y, Wennmalm S, Winblad B, Schedin-Weiss S, Tjernberg LO

Int J Mol Sci 22 (9) 4530 [2021-04-26; online 2021-04-26]

Integrated Microscopy Technologies Stockholm [Service]

PubMed DOI Crossref

smartPARE: An R Package for Efficient Identification of True mRNA Cleavage Sites.

Persson Hodén K, Hu X, Martinez G, Dixelius C

Int J Mol Sci 22 (8) 4267 [2021-04-20; online 2021-04-20]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Sperm Methylome Profiling Can Discern Fertility Levels in the Porcine Biomedical Model.

Pértille F, Alvarez-Rodriguez M, da Silva AN, ..., Guerrero-Bosagna C, Rodriguez-Martinez H

Int J Mol Sci 22 (5) 2679 [2021-03-06; online 2021-03-06]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

The Importance of Sex in the Discovery of Colorectal Cancer Prognostic Biomarkers.

Hases L, Ibrahim A, Chen X, ..., Hartman J, Williams C

Int J Mol Sci 22 (3) 1354 [2021-01-29; online 2021-01-29]

Bioinformatics Support for Computational Resources [Service] NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) National Genomics Infrastructure

PubMed DOI Crossref

Activation of RAS Signalling is Associated with Altered Cell Adhesion in Phaeochromocytoma.

Rossitti HM, Dutta RK, Larsson C, ..., Söderkvist P, Gimm O

Int J Mol Sci 21 (21) 8072 [2020-10-29; online 2020-10-29]

Bioinformatics Support for Computational Resources [Service] Clinical Genomics [Service] Clinical Genomics Linköping [Service]

PubMed DOI Crossref

Intra-Individual Behavioural Variability: A Trait under Genetic Control.

Henriksen R, Höglund A, Fogelholm J, ..., Dingemanse NJ, Wright D

Int J Mol Sci 21 (21) 8069 [2020-10-29; online 2020-10-29]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Interactions of the Lysosomotropic Detergent O-Methyl-Serine Dodecylamide Hydrochloride (MSDH) with Lipid Bilayer Membranes-Implications for Cell Toxicity.

Villamil Giraldo AM, Eriksson I, Wennmalm S, ..., Ederth T, Öllinger K

Int J Mol Sci 21 (9) 3136 [2020-04-29; online 2020-04-29]

Integrated Microscopy Technologies Stockholm [Collaborative]

PubMed DOI Crossref

Depression, GABA, and Age Correlate with Plasma Levels of Inflammatory Markers.

Bhandage AK, Cunningham JL, Jin Z, ..., Ekselius L, Birnir B

Int J Mol Sci 20 (24) 6172 [2019-12-06; online 2019-12-06]

Affinity Proteomics Uppsala [Service] PLA and Single Cell Proteomics [Collaborative]

PubMed DOI Crossref

Matrisome Properties of Scaffolds Direct Fibroblasts in Idiopathic Pulmonary Fibrosis.

Elowsson Rendin L, Löfdahl A, Åhrman E, ..., Malmström J, Westergren-Thorsson G

Int J Mol Sci 20 (16) - [2019-08-17; online 2019-08-17]

Structural Proteomics [Collaborative]

PubMed DOI Crossref

Influence of ABO Locus on PFA-100 Collagen-ADP Closure Time Is Not Totally Dependent on the Von Willebrand Factor. Results of a GWAS on GAIT-2 Project Phenotypes.

Pujol-Moix N, Martinez-Perez A, Sabater-Lleal M, ..., Souto JC, Soria JM

Int J Mol Sci 20 (13) - [2019-06-30; online 2019-06-30]

NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

SpotLight Proteomics-A IgG-Enrichment Phenotype Profiling Approach with Clinical Implications.

Lundström SL, Heyder T, Wiklundh E, ..., Grunewald J, Zubarev RA

Int J Mol Sci 20 (9) 2157 [2019-05-01; online 2019-05-01]

Chemical Proteomics [Technology development]

PubMed DOI Crossref

Preeclampsia is Associated with Sex-Specific Transcriptional and Proteomic Changes in Fetal Erythroid Cells.

Masoumi Z, Maes GE, Herten K, ..., Familari M, Hansson SR

Int J Mol Sci 20 (8) - [2019-04-25; online 2019-04-25]

Glycoproteomics and MS Proteomics [Service]

PubMed DOI Crossref

Current Status and Future Prospects of Clinically Exploiting Cancer-specific Metabolism-Why Is Tumor Metabolism Not More Extensively Translated into Clinical Targets and Biomarkers?

Muthu M, Nordström A

Int J Mol Sci 20 (6) 1385 [2019-03-19; online 2019-03-19]

Swedish Metabolomics Centre (SMC) [Service]

PubMed DOI Crossref

Recombinant Glycoprotein E of Varicella Zoster Virus Contains Glycan-Peptide Motifs That Modulate B Cell Epitopes into Discrete Immunological Signatures.

Nordén R, Nilsson J, Samuelsson E, ..., Olofsson S, Bergström T

Int J Mol Sci 20 (4) - [2019-02-22; online 2019-02-22]

Glycoproteomics and MS Proteomics [Service]

PubMed DOI Crossref

AXIN1 in Plasma or Serum Is a Potential New Biomarker for Endometriosis.

Ek M, Roth B, Engström G, Ohlsson B

Int J Mol Sci 20 (1) 189 [2019-01-07; online 2019-01-07]

Affinity Proteomics Uppsala [Service] Clinical Biomarkers [Service] PLA and Single Cell Proteomics [Service]

PubMed DOI Crossref

Regulation of Neuronal Na,K-ATPase by Extracellular Scaffolding Proteins.

Liebmann T, Fritz N, Kruusmägi M, ..., Aperia A, Brismar H

Int J Mol Sci 19 (8) 2214 [2018-07-29; online 2018-07-29]

Bioinformatics Support for Computational Resources [Service] Integrated Microscopy Technologies Stockholm [Service] Protein Science Facility (PSF) [Service]

PubMed DOI Crossref

Protein Expression in Tonsillar and Base of Tongue Cancer and in Relation to Human Papillomavirus (HPV) and Clinical Outcome.

Ramqvist T, Näsman A, Franzén B, ..., Dalianis T, Munck-Wikland E

Int J Mol Sci 19 (4) 978 [2018-03-25; online 2018-03-25]

Affinity Proteomics Uppsala [Collaborative] Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support for Computational Resources [Service] Bioinformatics Support, Infrastructure and Training [Collaborative] Clinical Biomarkers [Service] PLA and Single Cell Proteomics [Service]

PubMed DOI Crossref

InSiDDe: A Server for Designing Artificial Disordered Proteins.

Schramm A, Lieutaud P, Gianni S, Longhi S, Bignon C

Int J Mol Sci 19 (1) - [2017-12-29; online 2017-12-29]

Protein Science Facility (PSF) [Service]

PubMed DOI Crossref

Identification of New Potential Interaction Partners for Human Cytoplasmic Copper Chaperone Atox1: Roles in Gene Regulation?

Öhrvik H, Wittung-Stafshede P

Int J Mol Sci 16 (8) 16728-16739 [2015-07-23; online 2015-07-23]

Bioinformatics (NBIS) Bioinformatics Support and Infrastructure Bioinformatics Support, Infrastructure and Training

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