Cancers (Basel)

ISSN	2072-6694
ISSN-L	2072-6694
IUID	24326cfa9af74978b3169a5126a9020e
Modified	2020-11-27T13:14:09.052Z
Created	2020-01-07T08:53:35.038Z

Year 2024

PubMed DOI Crossref

Prospective Screening of Cancer Syndromes in Patients with Mesenchymal Tumors.

Öfverholm I, Lin Y, Mondini J, ..., Haglund de Flon F, Wallander K

Cancers (Basel) 16 (22) 3816 [2024-11-13; online 2024-11-13]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Clinical Genomics [Service] Clinical Genomics Stockholm [Service]

PubMed DOI Crossref

CRISPR-Cas9 Knockout Screens Identify DNA Damage Response Pathways and BTK as Essential for Cisplatin Response in Diffuse Large B-Cell Lymphoma.

Issa II, Due H, Brøndum RF, ..., Schmierer B, Dybkær K

Cancers (Basel) 16 (13) 2437 [2024-07-02; online 2024-07-02]

Bioinformatics Support for Computational Resources [Service] CRISPR Functional Genomics [Service]

PubMed DOI Crossref

Quantification and Profiling of Early and Late Differentiation Stage T Cells in Mantle Cell Lymphoma Reveals Immunotherapeutic Targets in Subsets of Patients.

Lokhande L, Nilsson D, de Matos Rodrigues J, ..., Jerkeman M, Ek S

Cancers (Basel) 16 (13) - [2024-06-21; online 2024-06-21]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

Tumor Predisposing Post-Zygotic Chromosomal Alterations in Bladder Cancer-Insights from Histologically Normal Urothelium.

Stańkowska W, Sarkisyan D, Bruhn-Olszewska B, ..., Filipowicz N, Dumanski JP

Cancers (Basel) 16 (5) - [2024-02-27; online 2024-02-27]

NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Year 2023

PubMed DOI Crossref

Fluorometric Quantification of Total Cell-Free DNA as a Prognostic Biomarker in Non-Small-Cell Lung Cancer Patients Treated with Immune Checkpoint Blockade.

Oliver J, Onieva JL, Garrido-Barros M, ..., Rueda-Domínguez A, Barragán I

Cancers (Basel) 15 (13) - [2023-06-26; online 2023-06-26]

Bioinformatics Support for Computational Resources [Service]

PubMed DOI Crossref

Simultaneous Ultra-Sensitive Detection of Structural and Single Nucleotide Variants Using Multiplex Droplet Digital PCR in Liquid Biopsies from Children with Medulloblastoma.

Arthur C, Jylhä C, de Ståhl TD, ..., Sandvik U, Tham E

Cancers (Basel) 15 (7) - [2023-03-25; online 2023-03-25]

Bioinformatics Support for Computational Resources [Service] NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Sensitive Detection of Cell-Free Tumour DNA Using Optimised Targeted Sequencing Can Predict Prognosis in Gastro-Oesophageal Cancer.

Wallander K, Haider Z, Jeggari A, ..., Lindblad M, Tham E

Cancers (Basel) 15 (4) - [2023-02-11; online 2023-02-11]

Clinical Genomics [Collaborative] Clinical Genomics Stockholm [Collaborative]

PubMed DOI Crossref

Immune-Activated B Cells Are Dominant in Prostate Cancer.

Saudi A, Banday V, Zirakzadeh AA, ..., Winqvist O, Sherif A

Cancers (Basel) 15 (3) - [2023-02-01; online 2023-02-01]

Bioinformatics Support for Computational Resources [Service] Clinical Genomics [Service] Clinical Genomics Umeå [Service]

Year 2022

PubMed DOI Crossref

Choice of High-Throughput Proteomics Method Affects Data Integration with Transcriptomics and the Potential Use in Biomarker Discovery.

Mosquim Junior S, Siino V, Rydén L, Vallon-Christersson J, Levander F

Cancers (Basel) 14 (23) - [2022-11-23; online 2022-11-23]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

The Expression of the Immunoproteasome Subunit PSMB9 Is Related to Distinct Molecular Subtypes of Uterine Leiomyosarcoma.

Maia Falcão R, Kokaraki G, De Wispelaere W, ..., Carlson JW, Petta TB

Cancers (Basel) 14 (20) - [2022-10-13; online 2022-10-13]

Global Proteomics and Proteogenomics [Service]

PubMed DOI Crossref

Synergistic Effects of Sanglifehrin-Based Cyclophilin Inhibitor NV651 with Cisplatin in Hepatocellular Carcinoma.

Simón Serrano S, Tavecchio M, Mallik J, ..., Hansson MJ, Massoumi R

Cancers (Basel) 14 (19) 4553 [2022-09-20; online 2022-09-20]

Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service]

PubMed DOI Crossref

Proliferation and Immune Response Gene Signatures Associated with Clinical Outcome to Immunotherapy and Targeted Therapy in Metastatic Cutaneous Malignant Melanoma.

Costa Svedman F, Das I, Tuominen R, ..., Höiom V, Egyhazi Brage S

Cancers (Basel) 14 (15) - [2022-07-22; online 2022-07-22]

NGI Short read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Next Generation Plasma Proteomics Identifies High-Precision Biomarker Candidates for Ovarian Cancer.

Gyllensten U, Hedlund-Lindberg J, Svensson J, ..., Åberg M, Enroth S

Cancers (Basel) 14 (7) - [2022-03-30; online 2022-03-30]

Affinity Proteomics Uppsala [Collaborative] NGI Proteomics [Collaborative] NGI Uppsala (SNP&SEQ Technology Platform) [Collaborative] National Genomics Infrastructure [Collaborative]

PubMed DOI Crossref

Downregulation and Hypermethylation of GABPB1 Is Associated with Aggressive Thyroid Cancer Features.

Xing X, Mu N, Yuan X, ..., Neo SY, Xu D

Cancers (Basel) 14 (6) - [2022-03-08; online 2022-03-08]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Genetic Alterations in Mitochondrial DNA Are Complementary to Nuclear DNA Mutations in Pheochromocytomas.

Tabebi M, Łysiak M, Dutta RK, ..., Gimm O, Söderkvist P

Cancers (Basel) 14 (2) - [2022-01-06; online 2022-01-06]

Clinical Genomics [Service] Clinical Genomics Linköping [Service]

Year 2021

PubMed DOI Crossref

Whole-Exome Sequencing of HPV Positive Tonsillar and Base of Tongue Squamous Cell Carcinomas Reveals a Global Mutational Pattern along with Relapse-Specific Somatic Variants.

Ährlund-Richter A, Holzhauser S, Dalianis T, Näsman A, Mints M

Cancers (Basel) 14 (1) - [2021-12-24; online 2021-12-24]

Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service]

PubMed DOI Crossref

Immune-Proteome Profiling in Classical Hodgkin Lymphoma Tumor Diagnostic Tissue.

Gholiha AR, Hollander P, Löf L, ..., Kamali-Moghaddam M, Enblad G

Cancers (Basel) 14 (1) 9 [2021-12-21; online 2021-12-21]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

Changes in the Proteome in the Development of Chronic Human Papillomavirus Infection-A Prospective Study in HIV Positive and HIV Negative Rwandan Women.

Bienvenu E, Mukanyangezi MF, Rulisa S, ..., Tobin G, Giglio D

Cancers (Basel) 13 (23) - [2021-11-28; online 2021-11-28]

Glycoproteomics and MS Proteomics [Service]

PubMed DOI Crossref

Tonsillar Cancer with High CD8+ T-Cell Infiltration Features Increased Levels of Dendritic Cells and Transcriptional Regulation Associated with an Inflamed Tumor Microenvironment.

Jimenez DG, Sobti A, Askmyr D, ..., Greiff L, Lindstedt M

Cancers (Basel) 13 (21) - [2021-10-25; online 2021-10-25]

Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service]

PubMed DOI Crossref

Morphological Features Extracted by AI Associated with Spatial Transcriptomics in Prostate Cancer.

Chelebian E, Avenel C, Kartasalo K, ..., Lundeberg J, Wählby C

Cancers (Basel) 13 (19) - [2021-09-28; online 2021-09-28]

BioImage Informatics [Collaborative] Bioinformatics (NBIS) [Collaborative]

PubMed DOI Crossref

Therapeutic Cancer Vaccination with Immunopeptidomics-Discovered Antigens Confers Protective Antitumor Efficacy.

Peltonen K, Feola S, Umer HM, ..., Lehtiö J, Cerullo V

Cancers (Basel) 13 (14) - [2021-07-07; online 2021-07-07]

Global Proteomics and Proteogenomics [Technology development]

PubMed DOI Crossref

Proteomic Profiling of Tissue Exosomes Indicates Continuous Release of Malignant Exosomes in Urinary Bladder Cancer Patients, Even with Pathologically Undetectable Tumour.

Eldh M, Mints M, Hiltbrunner S, ..., Sherif A, Gabrielsson S

Cancers (Basel) 13 (13) - [2021-06-29; online 2021-06-29]

Global Proteomics and Proteogenomics [Service]

PubMed DOI Crossref

Loss of RET Promotes Mesenchymal Identity in Neuroblastoma Cells.

Siaw JT, Gabre JL, Uçkun E, ..., Palmer RH, Guan J

Cancers (Basel) 13 (8) - [2021-04-15; online 2021-04-15]

Glycoproteomics and MS Proteomics [Service]

PubMed DOI Crossref

Deletions on Chromosome Y and Downregulation of the SRY Gene in Tumor Tissue Are Associated with Worse Survival of Glioblastoma Patients.

Łysiak M, Smits A, Roodakker KR, ..., Söderkvist P, Malmström A

Cancers (Basel) 13 (7) - [2021-03-31; online 2021-03-31]

Clinical Genomics [Service] Clinical Genomics Linköping [Service]

Year 2020

PubMed DOI Crossref

Identification of Pre-Diagnostic Metabolic Patterns for Glioma Using Subset Analysis of Matched Repeated Time Points.

Jonsson P, Antti H, Späth F, Melin B, Björkblom B

Cancers (Basel) 12 (11) 3349 [2020-11-12; online 2020-11-12]

Bioinformatics Support for Computational Resources [Service] Swedish Metabolomics Centre (SMC) [Service]

PubMed DOI Crossref

Ex Vivo Organoid Cultures Reveal the Importance of the Tumor Microenvironment for Maintenance of Colorectal Cancer Stem Cells.

Li X, Larsson P, Ljuslinder I, ..., Edin S, Palmqvist R

Cancers (Basel) 12 (4) 923 [2020-04-10; online 2020-04-10]

Clinical Genomics [Collaborative] Clinical Genomics Umeå [Collaborative]

PubMed DOI Crossref

Molecular Profiling for Predictors of Radiosensitivity in Patients with Breast or Head-and-Neck Cancer.

Drobin K, Marczyk M, Halle M, ..., Schwenk JM, Haghdoost S

Cancers (Basel) 12 (3) 753 [2020-03-22; online 2020-03-22]

Affinity Proteomics Stockholm [Collaborative]

Year 2019

PubMed DOI Crossref

Gene Expression Alterations during Development of Castration-Resistant Prostate Cancer Are Detected in Circulating Tumor Cells.

Josefsson A, Larsson K, Freyhult E, Damber J, Welén K

Cancers (Basel) 12 (1) - [2019-12-21; online 2019-12-21]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

The Hidden Story of Heterogeneous B-raf V600E Mutation Quantitative Protein Expression in Metastatic Melanoma-Association with Clinical Outcome and Tumor Phenotypes.

Betancourt LH, Szasz AM, Kuras M, ..., Sanchez A, Marko-Varga G

Cancers (Basel) 11 (12) - [2019-12-09; online 2019-12-09]

Structural Proteomics [Service]

PubMed DOI Crossref

GLUL Ablation Can Confer Drug Resistance to Cancer Cells via a Malate-Aspartate Shuttle-Mediated Mechanism.

Muthu M, Kumar R, Syed Khaja AS, ..., Persson JL, Nordström A

Cancers (Basel) 11 (12) 1945 [2019-12-05; online 2019-12-05]

Bioinformatics Support for Computational Resources [Service] Swedish Metabolomics Centre (SMC) [Service]