Swedish Metabolomics Centre (SMC)

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SciLifeLab Infrastructure Unit Since 2016.

Primary: Shown in the list of current labels, if end date is not specified.

Started: 2016

Ended: Current

Year 2022

PubMed DOI Crossref
Effects of conventionally treated and ozonated wastewater on the damselfly larva oxylipidome in response to on-site exposure.
Späth J, Brodin T, Falås P, ..., Fick J, Nording M
Chemosphere 309 (Pt 1) 136604 [2022-12-00; online 2022-09-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolite Pattern Derived from Lactiplantibacillus plantarum-Fermented Rye Foods and In Vitro Gut Fermentation Synergistically Inhibits Bacterial Growth.
Koistinen VM, Hedberg M, Shi L, ..., Hanhineva K, Landberg R
Mol Nutr Food Res 66 (21) e2101096 [2022-11-00; online 2022-08-19]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Circum‐Arctic distribution of chemical anti‐herbivore compounds suggests biome‐wide trade‐off in defence strategies in Arctic shrubs
Lindén E, te Beest M, Abreu IN, ..., Zimmermann H, Olofsson J
Ecography 2022 (11) - [2022-11-00; online 2022-08-30]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
TLCD1 and TLCD2 regulate cellular phosphatidylethanolamine composition and promote the progression of non-alcoholic steatohepatitis.
Petkevicius K, Palmgren H, Glover MS, ..., Maresca M, Peng XR
Nat Commun 13 (1) 6020 [2022-10-14; online 2022-10-14]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
IPT9, a cis-zeatin cytokinin biosynthesis gene, promotes root growth.
Antoniadi I, Mateo-Bonmatí E, Pernisová M, ..., Ljung K, Novák O
Front Plant Sci 13 (-) 932008 [2022-10-14; online 2022-10-14]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Differences in Metabolite Composition of Aloe barbadensis Mill. Extracts Lead to Differential Effects on Human Blood T Cell Activity In Vitro.
Ahluwalia B, Magnusson MK, Larsson F, ..., Ross AB, Öhman L
Molecules 27 (19) - [2022-10-06; online 2022-10-06]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
iP & OEIP – Cytokinin Micro Application Modulates Root Development with High Spatial Resolution
Pařízková B, Antoniadi I, Poxson DJ, ..., Novák O, Ljung K
Adv Materials Technologies 7 (10) 2101664 [2022-10-00; online 2022-04-28]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Fecal luminal factors from patients with irritable bowel syndrome induce distinct gene expression of colonoids.
Iribarren C, Nordlander S, Sundin J, ..., Simrén M, Öhman L
Neurogastroenterol. Motil. 34 (10) e14390 [2022-10-00; online 2022-04-29]
Integrated Microscopy Technologies Gothenburg [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Lower plasma concentrations of short-chain fatty acids (SCFAs) in patients with ADHD.
Yang LL, Stiernborg M, Skott E, ..., Giacobini M, Lavebratt C
J Psychiatr Res 156 (-) 36-43 [2022-09-28; online 2022-09-28]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Autoantibodies targeting malondialdehyde-modifications in rheumatoid arthritis regulate osteoclasts via inducing glycolysis and lipid biosynthesis.
Sakuraba K, Krishnamurthy A, Sun J, ..., Catrina AI, Réthi B
J. Autoimmun. 133 (-) 102903 [2022-09-13; online 2022-09-13]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Distinct metabolic hallmarks of WHO classified adult glioma subtypes.
Björkblom B, Wibom C, Eriksson M, ..., Sandström M, Melin B
Neuro-oncology 24 (9) 1454-1468 [2022-09-01; online 2022-02-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Multi-omics personalized network analyses highlight progressive disruption of central metabolism associated with COVID-19 severity.
Ambikan AT, Yang H, Krishnan S, ..., Benfeitas R, Neogi U
Cell Syst 13 (8) 665-681.e4 [2022-08-17; online 2022-07-08]
Affinity Proteomics Uppsala [Service] Bioinformatics Compute and Storage [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Feasibility and reliability of measures of bioactive lipids in human plasma and nasal mucosa.
Claeson AS, Lindberg RH, Gouveia-Figueira S, Nording ML
Journal of Chromatography B 1206 (-) 123357 [2022-08-15; online 2022-07-03]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Detailed Characterization of the Cell Wall Structure and Composition of Nordic Green Microalgae.
Spain O, Funk C
J. Agric. Food Chem. 70 (31) 9711-9721 [2022-08-10; online 2022-07-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Single, but not dual, attack by a biotrophic pathogen and a sap-sucking insect affects the oak leaf metabolome.
van Dijk LJA, Regazzoni EDE, Albrectsen BR, ..., Pawlowski K, Tack AJM
Front Plant Sci 13 (-) 897186 [2022-08-03; online 2022-08-03]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Metabolic control of arginine and ornithine levels paces the progression of leaf senescence.
Liebsch D, Juvany M, Li Z, ..., Guo H, Keech O
Plant Physiol. 189 (4) 1943-1960 [2022-08-01; online 2022-05-24]
Swedish Metabolomics Centre (SMC) [Technology development]
DOI Crossref
Seawater browning alters community composition and reduces nutritional quality of plankton in a subarctic marine ecosystem
Bandara T, Brugel S, Andersson A, Lau DCP
Can. J. Fish. Aquat. Sci. 79 (8) 1291-1301 [2022-08-00; online 2022-08-00]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Effect and function of β-N-methylamino-L-alanine in the diatom Phaeodactylum tricornutum.
Kim SY, Rasmussen U, Rydberg S
Sci. Total Environ. 830 (-) 154778 [2022-07-15; online 2022-03-24]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Inactivation of the entire Arabidopsis group II GH3s confers tolerance to salinity and water deficit.
Casanova-Sáez R, Mateo-Bonmatí E, Šimura J, ..., Staswick P, Ljung K
New Phytol. 235 (1) 263-275 [2022-07-00; online 2022-04-16]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Combining metabolic phenotype determination with metabolomics and transcriptional analyses to reveal pathways regulated by hydroxycarboxylic acid receptor 2.
Rabe P, Gehmlich M, Peters A, ..., Nordström A, Stäubert C
Discov Oncol 13 (1) 47 [2022-06-13; online 2022-06-13]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
No association in maternal serum levels of TMAO and its precursors in pre-eclampsia and in non-complicated pregnancies.
Jääskeläinen T, Kärkkäinen O, Heinonen S, Hanhineva K, Laivuori H
Pregnancy Hypertens 28 (-) 74-80 [2022-06-00; online 2022-02-26]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolomic profiles of mid-trimester amniotic fluid are not associated with subsequent spontaneous preterm delivery or gestational duration at delivery.
Hallingström M, Barman M, Savolainen O, ..., Brunius C, Jacobsson B
J Matern Fetal Neonatal Med 35 (11) 2054-2062 [2022-06-00; online 2020-06-16]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Dataset on seston and zooplankton fatty-acid compositions, zooplankton and phytoplankton biomass, and environmental conditions of coastal and offshore waters of the northern Baltic Sea.
Bandara T, Brugel S, Andersson A, Lau DCP
Data Brief 42 (-) 108158 [2022-06-00; online 2022-04-10]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Comparative structural analysis provides new insights into the function of R2-like ligand-binding oxidase.
Diamanti R, Srinivas V, Johansson AI, ..., Lebrette H, Högbom M
FEBS Lett. 596 (12) 1600-1610 [2022-06-00; online 2022-03-04]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Nitrogen represses haustoria formation through abscisic acid in the parasitic plant Phtheirospermum japonicum.
Kokla A, Leso M, Zhang X, ..., Yoshida S, Melnyk CW
Nat Commun 13 (1) 2976 [2022-05-27; online 2022-05-27]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
DGAT1 activity synchronises with mitophagy to protect cells from metabolic rewiring by iron depletion.
Long M, Sanchez-Martinez A, Longo M, ..., Whitworth AJ, McWilliams TG
EMBO J. 41 (10) e109390 [2022-05-16; online 2022-04-12]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
A randomized controlled trial of the effects of whole grains versus refined grains diets on the microbiome in pregnancy.
Sun H, Yamada P, Paetow A, ..., Dominguez-Bello MG, Young BK
Sci Rep 12 (1) 7509 [2022-05-07; online 2022-05-07]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
[Correlation between intake of fish or supplements containing omega-3 fatty acids and early pregnancy plasma concentrations.].
Tryggvadottir EA, Halldorsson TI, Birgisdottir BE, ..., Hardardottir H, Gunnarsdottir I
Laeknabladid 108 (5) 238-243 [2022-05-00; online 2022-05-03]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Nitrate fertilization may delay autumn leaf senescence, while amino acid treatments do not.
Fataftah N, Edlund E, Lihavainen J, ..., Näsholm T, Jansson S
Physiol Plantarum 174 (3) e13690 [2022-05-00; online 2022-04-24]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Hormone-sensitive lipase is localized at synapses and is necessary for normal memory functioning in mice.
Skoug C, Holm C, Duarte JMN
J. Lipid Res. 63 (5) 100195 [2022-05-00; online 2022-03-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Wastewater effluent affects behaviour and metabolomic endpoints in damselfly larvae.
Späth J, Fick J, McCallum E, ..., Nording ML, Brodin T
Sci Rep 12 (1) 6830 [2022-04-26; online 2022-04-26]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Auxin boosts energy generation pathways to fuel pollen maturation in barley.
Amanda D, Frey FP, Neumann U, ..., Ljung K, Acosta IF
Curr. Biol. 32 (8) 1798-1811.e8 [2022-04-25; online 2022-03-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The Effects of High Fiber Rye, Compared to Refined Wheat, on Gut Microbiota Composition, Plasma Short Chain Fatty Acids, and Implications for Weight Loss and Metabolic Risk Factors (the RyeWeight Study).
Iversen KN, Dicksved J, Zoki C, ..., Langton M, Landberg R
Nutrients 14 (8) - [2022-04-17; online 2022-04-17]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
SLC38A10 Regulate Glutamate Homeostasis and Modulate the AKT/TSC2/mTOR Pathway in Mouse Primary Cortex Cells.
Tripathi R, Aggarwal T, Lindberg FA, Klemm AH, Fredriksson R
Front Cell Dev Biol 10 (-) 854397 [2022-04-05; online 2022-04-05]
Autoimmunity and Serology Profiling [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Timing is everything - obtaining accurate measures of plant uptake of amino acids.
Svennerstam H, Jämtgård S
New Phytol. 234 (1) 311-318 [2022-04-00; online 2022-02-02]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Gastrointestinal mucus in dog: Physiological characteristics, composition, and structural properties.
Dubbelboer IR, Barmpatsalou V, Rodler A, ..., Häggström J, Bergström CAS
Eur J Pharm Biopharm 173 (-) 92-102 [2022-04-00; online 2022-02-25]
Global Proteomics and Proteogenomics [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
An inverse association between plasma benzoxazinoid metabolites and PSA after rye intake in men with prostate cancer revealed with a new method.
Nordin E, Steffensen SK, Laursen BB, ..., Fomsgaard IS, Landberg R
Sci Rep 12 (1) 5260 [2022-03-28; online 2022-03-28]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Mixed-mode chromatography-mass spectrometry enables targeted and untargeted screening of carboxylic acids in biological samples.
Hodek O, Argemi-Muntadas L, Khan A, Moritz T
Anal. Methods 14 (10) 1015-1022 [2022-03-10; online 2022-03-10]
Swedish Metabolomics Centre (SMC) [Technology development]
PubMed DOI Crossref
Alterations in Self-Aggregating Neuropeptides in Cerebrospinal Fluid of Patients with Parkinsonian Disorders.
Zhu S, Bäckström D, Forsgren L, Trupp M
J Parkinsons Dis 12 (4) 1169-1189 [2022-03-08; online 2022-03-08]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The chemical composition and antioxidant activity of mandaçaia (melipona quadrifasciata) geopropolis varies more due to region than month of collection.
Gabriel MB, Carneiro MJ, de Camargo RCR, Sawaya ACHF
Nat Prod Res 36 (6) 1626-1630 [2022-03-00; online 2021-03-10]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Differences between Arterial and Venous Umbilical Cord Plasma Metabolome and Association with Parity.
Hartvigsson O, Barman M, Savolainen O, ..., Sandberg AS, Brunius C
Metabolites 12 (2) - [2022-02-13; online 2022-02-13]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Comprehensive Peak Characterization (CPC) in Untargeted LC-MS Analysis.
Pirttilä K, Balgoma D, Rainer J, ..., Hedeland M, Brunius C
Metabolites 12 (2) - [2022-02-02; online 2022-02-02]
Swedish Metabolomics Centre (SMC) [Technology development]
PubMed DOI Crossref
LongITools: Dynamic longitudinal exposome trajectories in cardiovascular and metabolic noncommunicable diseases.
Ronkainen J, Nedelec R, Atehortua A, ..., Juola T, Sebert S
Environ Epidemiol 6 (1) e184 [2022-02-00; online 2021-12-28]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Impaired phosphocreatine metabolism in white adipocytes promotes inflammation.
Maqdasy S, Lecoutre S, Renzi G, ..., Mejhert N, Rydén M
Nat Metab 4 (2) 190-202 [2022-02-00; online 2022-02-14]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Trans cohort metabolic reprogramming towards glutaminolysis in long-term successfully treated HIV-infection.
Mikaeloff F, Svensson Akusjärvi S, Ikomey GM, ..., Benfeitas R, Neogi U
Commun Biol 5 (1) 27 [2022-01-11; online 2022-01-11]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Vegan Diet Is Associated With Favorable Effects on the Metabolic Performance of Intestinal Microbiota: A Cross-Sectional Multi-Omics Study.
Prochazkova M, Budinska E, Kuzma M, ..., Gojda J, Cahova M
Front Nutr 8 (-) 783302 [2022-01-07; online 2022-01-07]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolomics reveals changes in metabolite profiles due to growth and metamorphosis during the ontogeny of the northern damselfly.
Späth J, Brodin T, McCallum E, ..., Fick J, Nording ML
J Insect Physiol 136 (-) 104341 [2022-01-00; online 2021-11-27]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Influence of lipid extraction and processing conditions on hydrothermal conversion of microalgae feedstocks – Effect on hydrochar composition, secondary char formation and phytotoxicity
Benavente V, Lage S, Gentili FG, Jansson S
Chemical Engineering Journal 428 (-) 129559 [2022-01-00; online 2022-01-00]
Swedish Metabolomics Centre (SMC) [Service]

Year 2021

PubMed DOI Crossref
Improved Peripheral and Hepatic Insulin Sensitivity after Lifestyle Interventions in Type 2 Diabetes Is Associated with Specific Metabolomic and Lipidomic Signatures in Skeletal Muscle and Plasma.
Chorell E, Otten J, Stomby A, ..., Svensson M, Olsson T
Metabolites 11 (12) 834 [2021-12-03; online 2021-12-03]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Physiological properties, composition and structural profiling of porcine gastrointestinal mucus.
Barmpatsalou V, Dubbelboer IR, Rodler A, ..., Pedersen BL, Bergström CAS
Eur J Pharm Biopharm 169 (-) 156-167 [2021-12-00; online 2021-10-20]
Global Proteomics and Proteogenomics [Service] Integrated Microscopy Technologies Umeå [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Lowered nutritional quality of plankton caused by global environmental changes.
Lau DCP, Jonsson A, Isles PDF, Creed IF, Bergström AK
Glob Chang Biol 27 (23) 6294-6306 [2021-12-00; online 2021-09-30]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Multiomics and digital monitoring during lifestyle changes reveal independent dimensions of human biology and health.
Marabita F, James T, Karhu A, ..., Sallinen R, Kallioniemi O
Cell Syst - (-) - [2021-11-30; online 2021-11-30]
Autoimmunity and Serology Profiling [Service] Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Making complex measurements of meat composition fast: Application of rapid evaporative ionisation mass spectrometry to measuring meat quality and fraud.
Ross A, Brunius C, Chevallier O, ..., Zhang R, Vanhaecke L
Meat Sci 181 (-) 108333 [2021-11-00; online 2020-10-06]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Symptoms and oxylipins in plasma before and after exposure to rooms in which individuals have both experienced and not experienced building-related symptoms - an exploratory study.
Claeson AS, Sommar J, Liljelind I
Int J Environ Health Res - (-) 1-11 [2021-10-19; online 2021-10-19]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
De novo biosynthesis of bioactive isoflavonoids by engineered yeast cell factories.
Liu Q, Liu Y, Li G, ..., Chen Y, Nielsen J
Nat Commun 12 (1) 6085 [2021-10-19; online 2021-10-19]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Prediction and evaluation of the effect of pre-centrifugation sample management on the measurable untargeted LC-MS plasma metabolome.
Zheng R, Brunius C, Shi L, ..., Landberg R, Naluai ÅT
Anal. Chim. Acta 1182 (-) 338968 [2021-10-16; online 2021-08-19]
Swedish Metabolomics Centre (SMC) [Technology development]
PubMed DOI Crossref
Imatinib protects against human beta-cell death via inhibition of mitochondrial respiration and activation of AMPK.
Elksnis A, Schiffer TA, Palm F, ..., Welsh N, Wang X
Clin Sci (Lond) 135 (19) 2243-2263 [2021-10-14; online 2021-09-28]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Unraveling the Metabolic Derangements Occurring in Non-infarcted Areas of Pig Hearts With Chronic Heart Failure.
Correia C, Wang QD, Linhardt G, ..., Jennbacken K, Synnergren J
Front Cardiovasc Med 8 (-) 753470 [2021-10-13; online 2021-10-13]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Coordinated pyruvate kinase activity is crucial for metabolic adaptation and cell survival during mitochondrial dysfunction.
Zhou X, Mikaeloff F, Curbo S, ..., Neogi U, Karlsson A
Hum. Mol. Genet. 30 (21) 2012-2026 [2021-10-13; online 2021-06-26]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Potassium transporter TRH1/KUP4 contributes to distinct auxin-mediated root system architecture responses.
Templalexis D, Tsitsekian D, Liu C, ..., Hatzopoulos P, Rigas S
Plant Physiol. - (-) - [2021-10-11; online 2021-10-11]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Broadening the roles of UDP-glycosyltransferases in auxin homeostasis and plant development.
Mateo-Bonmatí E, Casanova-Sáez R, Šimura J, Ljung K
New Phytol. 232 (2) 642-654 [2021-10-00; online 2021-08-10]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The liver-alpha-cell axis after a mixed meal and during weight loss in type 2 diabetes.
Otten J, Stomby A, Waling M, ..., Holst JJ, Olsson T
Endocr Connect 10 (9) 1101-1110 [2021-09-09; online 2021-09-09]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Branched-chain amino acid metabolism is regulated by ERRα in primary human myotubes and is further impaired by glucose loading in type 2 diabetes.
Sjögren RJO, Rizo-Roca D, Chibalin AV, ..., Näslund E, Zierath JR
Diabetologia 64 (9) 2077-2091 [2021-09-00; online 2021-06-16]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Novel Microdialysis Technique Reveals a Dramatic Shift in Metabolite Secretion during the Early Stages of the Interaction between the Ectomycorrhizal Fungus Pisolithus microcarpus and Its Host Eucalyptus grandis.
Plett KL, Buckley S, Plett JM, ..., Lundberg-Felten J, Jämtgård S
Microorganisms 9 (9) - [2021-08-26; online 2021-08-26]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Three weeks of interrupting sitting lowers fasting glucose and glycemic variability, but not glucose tolerance, in free-living women and men with obesity.
Smith JAB, Savikj M, Sethi P, ..., Zierath JR, Näslund E
Am J Physiol Endocrinol Metab 321 (2) E203-E216 [2021-08-01; online 2021-06-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolomics analysis for diagnosis and biomarker discovery of transthyretin amyloidosis.
Olsson M, Hellman U, Wixner J, Anan I
Amyloid - (-) 1-9 [2021-07-28; online 2021-07-28]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolic Profiling of Plasma in Patients with Irritable Bowel Syndrome after a 4-Week Starch- and Sucrose-Reduced Diet.
Stenlund H, Nilholm C, Chorell E, ..., D'Amato M, Ohlsson B
Metabolites 11 (7) - [2021-07-04; online 2021-07-04]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Nicotinamide provides neuroprotection in glaucoma by protecting against mitochondrial and metabolic dysfunction.
Tribble JR, Otmani A, Sun S, ..., Votruba M, Williams PA
Redox Biol 43 (-) 101988 [2021-07-00; online 2021-04-24]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
HIV-Infected Individuals on ART With Impaired Immune Recovery Have Altered Plasma Metabolite Profiles.
Nyström S, Govender M, Yap SH, ..., Rajasuriar R, Larsson M
Open Forum Infect Dis 8 (7) ofab288 [2021-07-00; online 2021-06-02]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Exercise training improves mitochondrial respiration and is associated with an altered intramuscular phospholipid signature in women with obesity.
Mendham AE, Goedecke JH, Zeng Y, ..., Olsson T, Chorell E
Diabetologia 64 (7) 1642-1659 [2021-07-00; online 2021-03-26]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A metabolomic study of Gomphrena agrestis in Brazilian Cerrado suggests drought-adaptive strategies on metabolism.
Melo GA, Abreu IN, de Oliveira MB, ..., Pimenta MAS, Moritz T
Sci Rep 11 (1) 12933 [2021-06-21; online 2021-06-21]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Associations of maternal and infant metabolomes with immune maturation and allergy development at 12 months in the Swedish NICE-cohort.
Hartvigsson O, Barman M, Rabe H, ..., Brunius C, Sandberg AS
Sci Rep 11 (1) 12706 [2021-06-16; online 2021-06-16]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Impaired Luminal Control of Intestinal Macrophage Maturation in Patients With Ulcerative Colitis During Remission.
Maasfeh L, Härtlova A, Isaksson S, ..., Öhman L, Magnusson MK
Cellular and Molecular Gastroenterology and Hepatology 12 (4) 1415-1432 [2021-06-12; online 2021-06-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A Distinct Faecal Microbiota and Metabolite Profile Linked to Bowel Habits in Patients with Irritable Bowel Syndrome.
Ahluwalia B, Iribarren C, Magnusson MK, ..., Simrén M, Öhman L
Cells 10 (6) - [2021-06-10; online 2021-06-10]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The chemical compound 'Heatin' stimulates hypocotyl elongation and interferes with the Arabidopsis NIT1-subfamily of nitrilases.
van der Woude L, Piotrowski M, Klaasse G, ..., Smeekens S, van Zanten M
Plant J. 106 (6) 1523-1540 [2021-06-00; online 2021-05-06]
Chemical Biology Consortium Sweden (CBCS) [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Loss of Arabidopsis matrix metalloproteinase-5 affects root development and root bacterial communities during drought stress.
Mishra LS, Kim SY, Caddell DF, Coleman-Derr D, Funk C
Physiol Plantarum 172 (2) 1045-1058 [2021-06-00; online 2020-12-16]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Factors Affecting Detoxification of Softwood Enzymatic Hydrolysates Using Sodium Dithionite
Ilanidis D, Stagge S, Alriksson B, Jönsson LJ
Processes 9 (5) 887 [2021-05-18; online 2021-05-18]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Dynamics of Auxin and Cytokinin Metabolism during Early Root and Hypocotyl Growth in Theobroma cacao.
Mboene Noah A, Casanova-Sáez R, Makondy Ango RE, ..., Niemenak N, Ljung K
Plants (Basel) 10 (5) - [2021-05-12; online 2021-05-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Stem girdling affects the onset of autumn senescence in aspen in interaction with metabolic signals.
Lihavainen J, Edlund E, Björkén L, ..., Robinson KM, Jansson S
Physiol Plantarum 172 (1) 201-217 [2021-05-00; online 2021-01-07]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolomic profiling reveals plasma GlycA and GlycB as a potential biomarkers for treatment efficiency in rheumatoid arthritis.
Dudka I, Chachaj A, Sebastian A, ..., Gröbner G, Szuba A
Journal of Pharmaceutical and Biomedical Analysis 197 (-) 113971 [2021-04-15; online 2021-02-17]
Swedish Metabolomics Centre (SMC) [Service] Swedish NMR Centre (SNC) [Collaborative]
PubMed DOI Crossref
Modulation of Arabidopsis root growth by specialized triterpenes.
Bai Y, Fernández-Calvo P, Ritter A, ..., Goossens A, Pollier J
New Phytol. 230 (1) 228-243 [2021-04-00; online 2021-01-19]
Swedish Metabolomics Centre (SMC)
PubMed DOI Crossref
Function of the pseudo phosphotransfer proteins has diverged between rice and Arabidopsis.
Vaughan-Hirsch J, Tallerday EJ, Burr CA, ..., Bishopp A, Kieber JJ
Plant J. 106 (1) 159-173 [2021-04-00; online 2021-02-08]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Expanding functional protein sequence spaces using generative adversarial networks
Repecka D, Jauniskis V, Karpus L, ..., Engqvist MKM, Zelezniak A
Nat Mach Intell 3 (4) 324-333 [2021-04-00; online 2021-03-04]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A polysaccharide utilization locus from the gut bacterium Dysgonomonas mossii encodes functionally distinct carbohydrate esterases.
Kmezik C, Mazurkewich S, Meents T, ..., Brändén G, Larsbrink J
J. Biol. Chem. 296 (-) 100500 [2021-03-02; online 2021-03-02]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Plasma oxylipin levels associated with preterm birth in preterm labor✰.
Svenvik M, Raffetseder J, Brudin L, ..., Ernerudh J, Nording ML
Prostaglandins, Leukotrienes and Essential Fatty Acids (PLEFA) 166 (-) 102251 [2021-03-00; online 2021-01-23]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Plasma metabolomics of presymptomatic PSEN1-H163Y mutation carriers: a pilot study.
Natarajan K, Ullgren A, Khoshnood B, ..., Blennow K, Graff C
Ann Clin Transl Neurol 8 (3) 579-591 [2021-03-00; online 2021-01-21]
Bioinformatics Compute and Storage [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Overexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees.
Gandla ML, Mähler N, Escamez S, ..., Tuominen H, Jönsson LJ
Biotechnol Biofuels 14 (1) 43 [2021-02-16; online 2021-02-16]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Umbilical cord blood metabolome differs in relation to delivery mode, birth order and sex, maternal diet and possibly future allergy development in rural children.
Ross AB, Barman M, Hartvigsson O, ..., Wold AE, Sandberg AS
PLoS ONE 16 (1) e0242978 [2021-01-25; online 2021-01-25]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Porphyromonas gingivalis Produce Neutrophil Specific Chemoattractants Including Short Chain Fatty Acids.
Dahlstrand Rudin A, Khamzeh A, Venkatakrishnan V, ..., Christenson K, Bylund J
Front. Cell. Infect. Microbiol. 10 (-) 620681 [2021-01-19; online 2021-01-19]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
LRIG proteins regulate lipid metabolism via BMP signaling and affect the risk of type 2 diabetes.
Herdenberg C, Mutie PM, Billing O, ..., Franks PW, Hedman H
Commun Biol 4 (1) 90 [2021-01-19; online 2021-01-19]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Sucrose synthase determines carbon allocation in developing wood and alters carbon flow at the whole tree level in aspen.
Dominguez PG, Donev E, Derba-Maceluch M, ..., Mellerowicz EJ, Niittylä T
New Phytol. 229 (1) 186-198 [2021-01-00; online 2020-07-03]
Swedish Metabolomics Centre (SMC) Swedish NMR Centre (SNC) [Collaborative]
PubMed DOI Crossref
Studies of moss reproductive development indicate that auxin biosynthesis in apical stem cells may constitute an ancestral function for focal growth control.
Landberg K, Šimura J, Ljung K, Sundberg E, Thelander M
New Phytol. 229 (2) 845-860 [2021-01-00; online 2020-10-04]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Plasma metabolites associated with exposure to perfluoroalkyl substances and risk of type 2 diabetes - A nested case-control study.
Schillemans T, Shi L, Donat-Vargas C, ..., Åkesson A, Brunius C
Environ Int 146 (-) 106180 [2021-01-00; online 2020-10-25]
Swedish Metabolomics Centre (SMC) [Service]

Year 2020

PubMed DOI Crossref
Lysophospholipids as Predictive Markers of ST-Elevation Myocardial Infarction (STEMI) and Non-ST-Elevation Myocardial Infarction (NSTEMI).
Chorell E, Olsson T, Jansson JH, Wennberg P
Metabolites 11 (1) 25 [2020-12-31; online 2020-12-31]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The Bactericidal Fatty Acid Mimetic 2CCA-1 Selectively Targets Pneumococcal Extracellular Polyunsaturated Fatty Acid Metabolism.
Reithuber E, Nannapaneni P, Rzhepishevska O, ..., Henriques-Normark B, Mellroth P
MBio 11 (6) e03027-20 [2020-12-15; online 2020-12-15]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Reaction Wood Anatomical Traits and Hormonal Profiles in Poplar Bent Stem and Root.
De Zio E, Montagnoli A, Karady M, ..., Chiatante D, Trupiano D
Front Plant Sci 11 (-) 590985 [2020-12-07; online 2020-12-07]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Differentiation of two Maytenus species and their hybrid via untargeted metabolomics
Antunes ERM, Duarte RS, Moritz T, Sawaya ACHF
Industrial Crops and Products 158 (-) 113014 [2020-12-00; online 2020-12-00]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Changes in lipid and carotenoid metabolism in Chlamydomonas reinhardtii during induction of CO2-concentrating mechanism: Cellular response to low CO2 stress
Abreu IN, Aksmann A, Bajhaiya AK, ..., Selstam E, Moritz T
Algal Research 52 (-) 102099 [2020-12-00; online 2020-12-00]
Swedish Metabolomics Centre (SMC)
PubMed DOI Crossref
A metabolite roadmap of the wood-forming tissue in Populus tremula.
Abreu IN, Johansson AI, Sokołowska K, ..., Street NR, Moritz T
New Phytol. 228 (5) 1559-1572 [2020-12-00; online 2020-08-27]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Identification of Pre-Diagnostic Metabolic Patterns for Glioma Using Subset Analysis of Matched Repeated Time Points.
Jonsson P, Antti H, Späth F, Melin B, Björkblom B
Cancers (Basel) 12 (11) 3349 [2020-11-12; online 2020-11-12]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
The Structure of Riparian Vegetation in Agricultural Landscapes Influences Spider Communities and Aquatic-Terrestrial Linkages
Ramberg E, Burdon FJ, Sargac J, ..., Johnson RK, McKie BG
Water 12 (10) 2855 [2020-10-14; online 2020-10-14]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
HEARTBREAK Controls Post-translational Modification of INDEHISCENT to Regulate Fruit Morphology in Capsella.
Dong Y, Majda M, Šimura J, ..., Smith RS, Østergaard L
Curr. Biol. 30 (19) 3880-3888.e5 [2020-10-05; online 2020-08-13]
Swedish Metabolomics Centre (SMC)
PubMed DOI Crossref
Integration of molecular profiles in a longitudinal wellness profiling cohort.
Tebani A, Gummesson A, Zhong W, ..., Uhlen M, Fagerberg L
Nat Commun 11 (1) 4487 [2020-09-08; online 2020-09-08]
Affinity Proteomics Stockholm [Collaborative] Autoimmunity and Serology Profiling [Collaborative] Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Cellular Immunomonitoring [Collaborative] Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Cell-surface receptors enable perception of extracellular cytokinins.
Antoniadi I, Novák O, Gelová Z, ..., Ljung K, Turnbull C
Nat Commun 11 (1) 4284 [2020-08-27; online 2020-08-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
VEGF-B signaling impairs endothelial glucose transcytosis by decreasing membrane cholesterol content.
Moessinger C, Nilsson I, Muhl L, ..., Skogsberg J, Eriksson U
EMBO Rep. 21 (7) e49343 [2020-07-03; online 2020-05-24]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Serum Metabolites in Hand-Arm Vibration Exposed Workers.
Vihlborg P, Graff P, Hagenbjörk A, ..., Bryngelsson IL, Eriksson K
J Occup Environ Med 62 (7) 460-465 [2020-07-00; online 2020-07-31]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Auxin export from proximal fruits drives arrest in temporally competent inflorescences.
Ware A, Walker CH, Šimura J, ..., Wilson ZA, Bennett T
NPLANTS 6 (6) 699-707 [2020-06-00; online 2020-05-25]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Integration of whole-body [18F]FDG PET/MRI with non-targeted metabolomics can provide new insights on tissue-specific insulin resistance in type 2 diabetes.
Diamanti K, Visvanathar R, Pereira MJ, ..., Wadelius C, Ahlström H
Sci Rep 10 (1) 8343 [2020-05-20; online 2020-05-20]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Comprehensive metabolomics analysis of prostate cancer tissue in relation to tumor aggressiveness and TMPRSS2-ERG fusion status.
Dudka I, Thysell E, Lundquist K, ..., Wikström P, Gröbner G
BMC Cancer 20 (1) 437 [2020-05-18; online 2020-05-18]
Swedish Metabolomics Centre (SMC) [Service] Swedish NMR Centre (SNC) [Collaborative]
PubMed DOI Crossref
Lipid accumulation controls the balance between surface connection and scission of caveolae.
Hubert M, Larsson E, Vegesna NVG, ..., Moodie LW, Lundmark R
Elife 9 (-) - [2020-05-04; online 2020-05-04]
Integrated Microscopy Technologies Umeå [Collaborative] Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Plant resistance does not compromise parasitoid-based biocontrol of a strawberry pest.
Weber D, Egan PA, Muola A, Ericson LE, Stenberg JA
Sci Rep 10 (1) 5899 [2020-04-03; online 2020-04-03]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolomics analyses in non-diabetic middle-aged individuals reveal metabolites impacting early glucose disturbances and insulin sensitivity.
Bos MM, Noordam R, Bennett K, ..., Surowiec I, van Heemst D
Metabolomics 16 (3) 35 [2020-03-02; online 2020-03-02]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolic Profiling and Compound-Class Identification Reveal Alterations in Serum Triglyceride Levels in Mice Immunized with Human Vaccine Adjuvant Alum.
Khoomrung S, Nookaew I, Sen P, ..., Harandi AM, Nielsen J
J. Proteome Res. 19 (1) 269-278 [2020-01-03; online 2019-11-01]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolic response patterns in brain microdialysis fluids and serum during interstitial cisplatin treatment of high-grade glioma.
Björkblom B, Jonsson P, Tabatabaei P, ..., Bergenheim AT, Antti H
Br. J. Cancer 122 (2) 221-232 [2020-01-00; online 2019-12-10]
Swedish Metabolomics Centre (SMC) [Service]

Year 2019

PubMed DOI Crossref
Autoregulation of RCO by Low-Affinity Binding Modulates Cytokinin Action and Shapes Leaf Diversity.
Hajheidari M, Wang Y, Bhatia N, ..., Gan X, Tsiantis M
Curr. Biol. 29 (24) 4183-4192.e6 [2019-12-16; online 2019-11-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
HISTONE DEACETYLASE 9 stimulates auxin-dependent thermomorphogenesis in Arabidopsis thaliana by mediating H2A.Z depletion.
van der Woude LC, Perrella G, Snoek BL, ..., Kaiserli E, van Zanten M
Proc. Natl. Acad. Sci. U.S.A. 116 (50) 25343-25354 [2019-12-10; online 2019-11-25]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
GLUL Ablation Can Confer Drug Resistance to Cancer Cells via a Malate-Aspartate Shuttle-Mediated Mechanism.
Muthu M, Kumar R, Syed Khaja AS, ..., Persson JL, Nordström A
Cancers (Basel) 11 (12) 1945 [2019-12-05; online 2019-12-05]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Targeted Multiple Reaction Monitoring Analysis of CSF Identifies UCHL1 and GPNMB as Candidate Biomarkers for ALS.
Zhu S, Wuolikainen A, Wu J, ..., Forsgren L, Trupp M
J. Mol. Neurosci. 69 (4) 643-657 [2019-12-00; online 2019-11-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
PECTIN ACETYLESTERASE9 Affects the Transcriptome and Metabolome and Delays Aphid Feeding.
Kloth KJ, Abreu IN, Delhomme N, ..., Moritz T, Albrectsen BR
Plant Physiol. 181 (4) 1704-1720 [2019-12-00; online 2019-09-24]
Bioinformatics Compute and Storage [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolic phenotype of breast-fed infants, and infants fed standard formula or bovine MFGM supplemented formula: a randomized controlled trial
He X, Parenti M, Grip T, ..., Timby N, Slupsky CM
Sci Rep 9 (1) 339 [2019-12-00; online 2019-01-23]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Intra- and inter-individual metabolic profiling highlights carnitine and lysophosphatidylcholine pathways as key molecular defects in type 2 diabetes
Diamanti K, Cavalli M, Pan G, ..., Komorowski J, Wadelius C
Sci Rep 9 (1) 9653 [2019-12-00; online 2019-07-04]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Heterologous phosphoketolase expression redirects flux towards acetate, perturbs sugar phosphate pools and increases respiratory demand in Saccharomyces cerevisiae
Bergman A, Hellgren J, Moritz T, ..., Nielsen J, Chen Y
Microb. Cell Fact. 18 (1) 25 [2019-12-00; online 2019-02-01]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Mucosal Metabolomic Profiling and Pathway Analysis Reveal the Metabolic Signature of Ulcerative Colitis.
Diab J, Hansen T, Goll R, ..., Florholmen J, Forsdahl G
Metabolites 9 (12) S035-S035 [2019-11-27; online 2019-11-27]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Synthesis of Indomorphan Pseudo-Natural Product Inhibitors of Glucose Transporters GLUT-1 and -3.
Ceballos J, Schwalfenberg M, Karageorgis G, ..., Ziegler S, Waldmann H
Angew. Chem. Int. Ed. Engl. 58 (47) 17016-17025 [2019-11-18; online 2019-10-07]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A MYC2/MYC3/MYC4-dependent transcription factor network regulates water spray-responsive gene expression and jasmonate levels.
Van Moerkercke A, Duncan O, Zander M, ..., Millar AH, Van Aken O
Proc. Natl. Acad. Sci. U.S.A. 116 (46) 23345-23356 [2019-11-12; online 2019-10-29]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Two-step derivatization for determination of sugar phosphates in plants by combined reversed phase chromatography/tandem mass spectrometry.
Rende U, Niittylä T, Moritz T
Plant Methods 15 (1) 127 [2019-11-07; online 2019-11-07]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A bacterial assay for rapid screening of IAA catabolic enzymes.
Brunoni F, Collani S, Šimura J, ..., Bellini C, Ljung K
Plant Methods 15 (1) 126 [2019-11-04; online 2019-11-04]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Yeast Volatomes Differentially Affect Larval Feeding in an Insect Herbivore.
Ljunggren J, Borrero-Echeverry F, Chakraborty A, ..., Witzgall P, Bengtsson M
Appl. Environ. Microbiol. 85 (21) - [2019-11-01; online 2019-10-16]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
PIN-driven auxin transport emerged early in streptophyte evolution.
Skokan R, Medvecká E, Viaene T, ..., Petrášek J, Friml J
NPLANTS 5 (11) 1114-1119 [2019-11-00; online 2019-11-11]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Lipidomics in Ulcerative Colitis Reveal Alteration in Mucosal Lipid Composition Associated With the Disease State.
Diab J, Hansen T, Goll R, ..., Florholmen J, Forsdahl G
Inflamm Bowel Dis 25 (11) 1780-1787 [2019-10-18; online 2019-05-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Implantable Organic Electronic Ion Pump Enables ABA Hormone Delivery for Control of Stomata in an Intact Tobacco Plant.
Bernacka-Wojcik I, Huerta M, Tybrandt K, ..., Berggren M, Stavrinidou E
Small 15 (43) e1902189 [2019-10-00; online 2019-09-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Leaf metabolic signatures induced by real and simulated herbivory in black mustard (Brassica nigra).
Papazian S, Girdwood T, Wessels BA, ..., Moritz T, Albrectsen BR
Metabolomics 15 (10) 130 [2019-09-28; online 2019-09-28]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Combining microdialysis with metabolomics to characterize the in situ composition of dissolved organic compounds in boreal forest soil
Randewig D, Marshall JD, Näsholm T, Jämtgård S
Soil Biology and Biochemistry 136 (-) 107530 [2019-09-00; online 2019-09-00]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Publisher Correction: Metabolic phenotype of breast-fed infants, and infants fed standard formula or bovine MFGM supplemented formula: a randomized controlled trial.
He X, Parenti M, Grip T, ..., Timby N, Slupsky CM
Sci Rep 9 (1) 12382 [2019-08-22; online 2019-08-22]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Joint and unique multiblock analysis of biological data - multiomics malaria study.
Surowiec I, Skotare T, Sjögren R, ..., Normark J, Trygg J
Faraday Discuss. 218 (0) 268-283 [2019-08-15; online 2019-05-24]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A role for the auxin precursor anthranilic acid in root gravitropism via regulation of PIN-FORMED protein polarity and relocalisation in Arabidopsis.
Doyle SM, Rigal A, Grones P, ..., Novák O, Robert S
New Phytol. 223 (3) 1420-1432 [2019-08-00; online 2019-06-07]
Chemical Biology Consortium Sweden (CBCS) [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Vitamin D and Phenylbutyrate Supplementation Does Not Modulate Gut Derived Immune Activation in HIV-1.
Missailidis C, Sørensen N, Ashenafi S, ..., Brighenti S, Bergman P
Nutrients 11 (7) 1675 [2019-07-21; online 2019-07-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The molecular pathogenesis of superoxide dismutase 1-linked ALS is promoted by low oxygen tension.
Keskin I, Forsgren E, Lehmann M, ..., Marklund SL, Gilthorpe JD
Acta Neuropathol. 138 (1) 85-101 [2019-07-00; online 2019-03-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Alterations in the metabolism of phospholipids, bile acids and branched-chain amino acids predicts development of type 2 diabetes in black South African women: a prospective cohort study.
Zeng Y, Mtintsilana A, Goedecke JH, ..., Olsson T, Chorell E
Metabolism 95 (-) 57-64 [2019-06-00; online 2019-04-04]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolic profiling of zebrafish embryo development from blastula period to early larval stages.
Dhillon SS, Torell F, Donten M, ..., Trygg J, Lundstedt T
PLoS ONE 14 (5) e0213661 [2019-05-14; online 2019-05-14]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Comparisons of analysis of fatty acid methyl ester (FAME) of microalgae by chromatographic techniques
Niemi C, Lage S, Gentili FG
Algal Research 39 (-) 101449 [2019-05-00; online 2019-05-00]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Nitrogen utilization during germination of somatic embryos of Norway spruce: revealing the importance of supplied glutamine for nitrogen metabolism
Carlsson J, Egertsdotter U, Ganeteg U, Svennerstam H
Trees 33 (2) 383-394 [2019-04-00; online 2018-11-09]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Selective auxin agonists induce specific AUX/IAA protein degradation to modulate plant development.
Vain T, Raggi S, Ferro N, ..., Pauwels L, Robert S
Proc. Natl. Acad. Sci. U.S.A. 116 (13) 6463-6472 [2019-03-26; online 2019-03-08]
Chemical Biology Consortium Sweden (CBCS) [Collaborative] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Current Status and Future Prospects of Clinically Exploiting Cancer-specific Metabolism-Why Is Tumor Metabolism Not More Extensively Translated into Clinical Targets and Biomarkers?
Muthu M, Nordström A
Int J Mol Sci 20 (6) 1385 [2019-03-19; online 2019-03-19]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Regulatory Diversification of INDEHISCENT in the Capsella Genus Directs Variation in Fruit Morphology.
Dong Y, Jantzen F, Stacey N, ..., Ljung K, Østergaard L
Curr. Biol. 29 (6) 1038-1046.e4 [2019-03-18; online 2019-02-28]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Surveillance of cell wall diffusion barrier integrity modulates water and solute transport in plants.
Wang P, Calvo-Polanco M, Reyt G, ..., Boursiac Y, Salt DE
Sci Rep 9 (1) 4227 [2019-03-12; online 2019-03-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A Quantitative Analysis of Colonic Mucosal Oxylipins and Endocannabinoids in Treatment-Naïve and Deep Remission Ulcerative Colitis Patients and the Potential Link With Cytokine Gene Expression.
Diab J, Al-Mahdi R, Gouveia-Figueira S, ..., Florholmen J, Forsdahl G
Inflamm Bowel Dis 25 (3) 490-497 [2019-02-21; online 2018-11-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolomic and lipidomic assessment of the metabolic syndrome in Dutch middle-aged individuals reveals novel biological signatures separating health and disease.
Surowiec I, Noordam R, Bennett K, ..., Lundstedt T, van Heemst D
Metabolomics 15 (2) 23 [2019-02-12; online 2019-02-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A standardized protocol for comparable analysis of GSH/GSSG by UHPLC-ESI-MSMS for human plasma.
Claeson AS, Gouveia-Figueira S, Stenlund H, Johansson AI
Journal of Chromatography B 1104 (-) 67-72 [2019-01-01; online 2018-11-10]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Tissue-specific hormone profiles from woody poplar roots under bending stress.
De Zio E, Trupiano D, Karady M, ..., Ljung K, Scippa GS
Physiol Plantarum 165 (1) 101-113 [2019-01-00; online 2018-10-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Auxin Function in the Brown Alga Dictyota dichotoma.
Bogaert KA, Blommaert L, Ljung K, Beeckman T, De Clerck O
Plant Physiol. 179 (1) 280-299 [2019-01-00; online 2018-11-12]
Swedish Metabolomics Centre (SMC) [Service]

Year 2018

PubMed DOI Crossref
Satiety Factors Oleoylethanolamide, Stearoylethanolamide, and Palmitoylethanolamide in Mother's Milk Are Strongly Associated with Infant Weight at Four Months of Age-Data from the Odense Child Cohort.
Bruun S, Gouveia-Figueira S, Domellöf M, ..., Fowler CJ, Zachariassen G
Nutrients 10 (11) 1747 [2018-11-13; online 2018-11-13]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The Xerobranching Response Represses Lateral Root Formation When Roots Are Not in Contact with Water.
Orman-Ligeza B, Morris EC, Parizot B, ..., Beeckman T, Draye X
Curr. Biol. 28 (19) 3165-3173.e5 [2018-10-08; online 2018-09-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Broad spectrum developmental role of Brachypodium AUX1.
van der Schuren A, Voiniciuc C, Bragg J, ..., Pauly M, Hardtke CS
New Phytol. 219 (4) 1216-1223 [2018-09-00; online 2018-06-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Acute sleep loss results in tissue-specific alterations in genome-wide DNA methylation state and metabolic fuel utilization in humans
Cedernaes J, Schönke M, Westholm JO, ..., Zierath JR, Benedict C
Sci Adv 4 (8) eaar8590 [2018-08-00; online 2018-08-22]
Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolic Profiling of Multiorgan Samples: Evaluation of MODY5/RCAD Mutant Mice.
Torell F, Bennett K, Cereghini S, ..., Trygg J, Lundstedt T
J. Proteome Res. 17 (7) 2293-2306 [2018-07-06; online 2018-06-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A heterogeneous response of liver and skeletal muscle fat to the combination of a Paleolithic diet and exercise in obese individuals with type 2 diabetes: a randomised controlled trial
Otten J, Stomby A, Waling M, ..., Hauksson J, Olsson T
Diabetologia 61 (7) 1548-1559 [2018-07-00; online 2018-04-26]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Simultaneous determination of ribonucleoside and deoxyribonucleoside triphosphates in biological samples by hydrophilic interaction liquid chromatography coupled with tandem mass spectrometry.
Kong Z, Jia S, Chabes AL, ..., Moritz T, Chabes A
Nucleic Acids Res. 46 (11) e66 [2018-06-20; online 2018-03-20]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Plant Hormonomics: Multiple Phytohormone Profiling by Targeted Metabolomics
Šimura J, Antoniadi I, Široká J, ..., Ljung K, Novák O
Plant Physiol. 177 (2) 476-489 [2018-06-13; online 2018-04-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees.
Edwards KD, Takata N, Johansson M, ..., Ljung K, Eriksson ME
Plant Cell Environ. 41 (6) 1468-1482 [2018-06-00; online 2018-04-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Assessing Cu impacts on freshwater diatoms: biochemical and metabolomic responses of Tabellaria flocculosa (Roth) Kützing
Gonçalves S, Kahlert M, Almeida SFP, Figueira E
Science of The Total Environment 625 (-) 1234-1246 [2018-06-00; online 2018-06-00]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Darkened Leaves Use Different Metabolic Strategies for Senescence and Survival.
Law SR, Chrobok D, Juvany M, ..., Gardeström P, Keech O
Plant Physiol. 177 (1) 132-150 [2018-05-00; online 2018-03-09]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Ultra-rapid auxin metabolite profiling for high-throughput mutant screening in Arabidopsis.
Pencík A, Casanova-Sáez R, Pilarová V, ..., Ljung K, Novák O
J. Exp. Bot. 69 (10) 2569-2579 [2018-04-27; online 2018-03-08]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate.
Giri J, Bhosale R, Huang G, ..., Swarup R, Bennett MJ
Nat Commun 9 (1) 1408 [2018-04-12; online 2018-04-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.
Bhosale R, Giri J, Pandey BK, ..., Bennett MJ, Swarup R
Nat Commun 9 (1) 1409 [2018-04-12; online 2018-04-12]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Modulation of saturation and chain length of fatty acids in Saccharomyces cerevisiae for production of cocoa butter-like lipids
Bergenholm D, Gossing M, Wei Y, Siewers V, Nielsen J
Biotechnol. Bioeng. 115 (4) 932-942 [2018-04-00; online 2018-01-24]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Transcriptional stimulation of rate-limiting components of the autophagic pathway improves plant fitness.
Minina EA, Moschou PN, Vetukuri RR, ..., Hofius D, Bozhkov PV
J. Exp. Bot. 69 (6) 1415-1432 [2018-03-14; online 2018-01-25]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Interferon γ treatment increases endocannabinoid and related N-acylethanolamine levels in T84 human colon carcinoma cells
Alhouayek M, Rankin L, Gouveia-Figueira S, Fowler CJ
British Journal of Pharmacology - (-) - [2018-02-05; online 2018-02-05]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A Common Peptidolytic Mechanism for Targeting Peptide Degradation in Mitochondria and Chloroplasts.
Kmiec B, Branca RMM, Murcha MW, ..., Glaser E, Teixeira PF
Mol Plant 11 (2) 342-345 [2018-02-05; online 2017-11-26]
Clinical Proteomics Mass spectrometry [Service] Global Proteomics and Proteogenomics [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Red meat intake in chronic kidney disease patients: Two sides of the coin
Mafra D, Borges NA, Cardozo LFMdF, ..., Lindholm B, Stenvinkel P
Nutrition 46 (-) 26-32 [2018-02-00; online 2018-02-00]
Bioinformatics Compute and Storage [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of​ ​​Populus​​ ​trees.
Obudulu O, Mähler N, Skotare T, ..., Trygg J, Tuominen H
BMC Genomics 19 (1) 11 [2018-01-03; online 2018-01-03]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Optimising methods for the recovery and quantification of di- and tripeptides in soil
Jämtgård S, Robinson N, Moritz T, Colgrave ML, Schmidt S
Soil Res. 56 (4) 404 [2018-00-00; online 2018-00-00]
Swedish Metabolomics Centre (SMC) [Service]

Year 2017

PubMed DOI Crossref
Metabolome and transcriptome profiling reveal new insights into somatic embryo germination in Norway spruce (Picea abies).
Dobrowolska I, Businge E, Abreu IN, Moritz T, Egertsdotter U
Tree Physiol 37 (12) 1752-1766 [2017-12-01; online 2017-10-07]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The oxylipin and endocannabidome responses in acute phase Plasmodium falciparum malaria in children
Surowiec I, Gouveia-Figueira S, Orikiiriza J, ..., Normark J, Trygg J
Malar. J. 16 (1) - [2017-12-00; online 2017-09-08]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Brassinosteroid signaling-dependent root responses to prolonged elevated ambient temperature
Martins S, Montiel-Jorda A, Cayrel A, ..., Ljung K, Vert G
Nat Commun 8 (1) - [2017-12-00; online 2017-08-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Combined transcriptome and translatome analyses reveal a role for tryptophan-dependent auxin biosynthesis in the control of DOG1-dependent seed dormancy
Bai B, Novák O, Ljung K, Hanson J, Bentsink L
New Phytol - (-) - [2017-11-15; online 2017-11-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Type B Response Regulators Act As Central Integrators in Transcriptional Control of the Auxin Biosynthesis Enzyme TAA1
Yan Z, Liu X, Ljung K, ..., Wang M, Tao Y
Plant Physiol. 175 (3) 1438-1454 [2017-11-00; online 2017-09-20]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Multivariate strategy for the sample selection and integration of multi-batch data in metabolomics
Surowiec I, Johansson E, Torell F, ..., Jakobsson PJ, Trygg J
Metabolomics 13 (10) - [2017-10-00; online 2017-08-24]
Swedish Metabolomics Centre (SMC) [Technology development]
PubMed DOI Crossref
Effects of tumour necrosis factor α upon the metabolism of the endocannabinoid anandamide in prostate cancer cells.
Karlsson J, Gouveia-Figueira S, Alhouayek M, Fowler CJ
PLoS ONE 12 (9) e0185011 [2017-09-14; online 2017-09-14]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Auxin minimum triggers the developmental switch from cell division to cell differentiation in the Arabidopsis root.
Di Mambro R, De Ruvo M, Pacifici E, ..., Grieneisen VA, Sabatini S
Proc. Natl. Acad. Sci. U.S.A. 114 (36) E7641-E7649 [2017-09-05; online 2017-08-22]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Enhanced Secondary- and Hormone Metabolism in Leaves of Arbuscular Mycorrhizal Medicago truncatula
Adolfsson L, Nziengui H, Abreu IN, ..., Schoefs B, Spetea C
Plant Physiol. 175 (1) 392-411 [2017-09-00; online 2017-07-11]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Nitrogen uptake and assimilation in proliferating embryogenic cultures of Norway spruce-Investigating the specific role of glutamine.
Carlsson J, Svennerstam H, Moritz T, Egertsdotter U, Ganeteg U
PLoS ONE 12 (8) e0181785 [2017-08-24; online 2017-08-24]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Dual herbivore attack and herbivore density affect metabolic profiles of Brassica nigra leaves
Ponzio C, Papazian S, Albrectsen BR, Dicke M, Gols R
Plant, Cell & Environment 40 (8) 1356-1367 [2017-08-00; online 2017-02-24]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Tuning Metabolome Coverage in Reversed Phase LC-MS Metabolomics of MeOH Extracted Samples Using the Reconstitution Solvent Composition.
Lindahl A, Sääf S, Lehtiö J, Nordström A
Anal. Chem. 89 (14) 7356-7364 [2017-07-18; online 2017-06-28]
Clinical Proteomics Mass spectrometry [Service] Global Proteomics and Proteogenomics [Service] Swedish Metabolomics Centre (SMC) [Technology development]
PubMed DOI Crossref
Establishment of photosynthesis is controlled by two distinct regulatory phases
Dubreuil C, Jin X, Barajas-López JdD, ..., Small ID, Strand A
Plant Physiol. - (-) pp.00435.2017 [2017-06-16; online 2017-06-16]
Cryo-EM [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The effects of thawing on the plasma metabolome: evaluating differences between thawed plasma and multi-organ samples
Torell F, Bennett K, Rännar S, ..., Lundstedt T, Trygg J
Metabolomics 13 (6) - [2017-06-00; online 2017-04-17]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolite quantification by NMR and LC-MS/MS reveals differences between unstimulated, stimulated, and pure parotid saliva
Figueira J, Gouveia-Figueira S, Öhman C, ..., Nording ML, Öhman A
Journal of Pharmaceutical and Biomedical Analysis 140 (-) 295-300 [2017-06-00; online 2017-06-00]
Swedish Metabolomics Centre (SMC) [Service] Swedish NMR Centre (SNC) [Collaborative]
PubMed DOI Crossref
Levels of oxylipins, endocannabinoids and related lipids in plasma before and after low-level exposure to acrolein in healthy individuals and individuals with chemical intolerance
Claeson AS, Gouveia-Figueira S, Häggström J, Fowler CJ, Nording ML
Prostaglandins, Leukotrienes and Essential Fatty Acids (PLEFA) 121 (-) 60-67 [2017-06-00; online 2017-06-00]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Reproducible diagnostic metabolites in plasma from typhoid fever patients in Asia and Africa
Näsström E, Parry CM, Vu Thieu NT, ..., Antti H, Baker S
Elife 6 (-) - [2017-05-09; online 2017-05-09]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Regulating plant physiology with organic electronics
Poxson DJ, Karady M, Gabrielsson R, ..., Simon DT, Berggren M
Proc Natl Acad Sci USA 114 (18) 4597-4602 [2017-05-02; online 2017-04-18]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Contrasting patterns of cytokinins between years in senescing aspen leaves
Edlund E, Novak O, Karady M, Ljung K, Jansson S
Plant, Cell & Environment 40 (5) 622-634 [2017-05-00; online 2017-03-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Discrimination of pancreatic cancer and pancreatitis by LC-MS metabolomics.
Lindahl A, Heuchel R, Forshed J, ..., Löhr M, Nordström A
Metabolomics 13 (5) 61 [2017-04-01; online 2017-04-01]
Clinical Proteomics Mass spectrometry [Service] Global Proteomics and Proteogenomics [Service] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The anti-inflammatory compound palmitoylethanolamide inhibits prostaglandin and hydroxyeicosatetraenoic acid production by a macrophage cell line
Gabrielsson L, Gouveia-Figueira S, Häggström J, Alhouayek M, Fowler CJ
Pharmacol Res Perspect 5 (2) e00300 [2017-04-00; online 2017-02-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Neonatal Cord Blood Oxylipins and Exposure to Particulate Matter in the Early-Life Environment: An ENVIRONAGE Birth Cohort Study.
Martens DS, Gouveia S, Madhloum N, ..., Nording M, Nawrot TS
Environ. Health Perspect. 125 (4) 691-698 [2017-04-00; online 2016-11-05]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Lipid response patterns in acute phase paediatric Plasmodium falciparum malaria
Orikiiriza J, Surowiec I, Lindquist E, ..., Trygg J, Normark J
Metabolomics 13 (4) - [2017-04-00; online 2017-02-23]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration
Sun X, Cahill J, Van Hautegem T, ..., Inzé D, Nelissen H
Nat Commun 8 (-) 14752 [2017-03-16; online 2017-03-16]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Reducing VEGF-B Signaling Ameliorates Renal Lipotoxicity and Protects against Diabetic Kidney Disease
Falkevall A, Mehlem A, Palombo I, ..., Nash A, Eriksson U
Cell Metabolism 25 (3) 713-726 [2017-03-00; online 2017-03-00]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The Arabidopsis bZIP11 transcription factor links low-energy signalling to auxin-mediated control of primary root growth
Weiste C, Pedrotti L, Selvanayagam J, ..., Hanson J, Dröge-Laser W
PLoS Genet. 13 (2) e1006607 [2017-02-03; online 2017-02-03]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Defense Responses in Aspen with Altered Pectin Methylesterase Activity Reveal the Hormonal Inducers of Tyloses
Leśniewska J, Öhman D, Krzesłowska M, ..., Moritz T, Mellerowicz EJ
Plant Physiol. 173 (2) 1409-1419 [2017-02-00; online 2016-12-06]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
cis-Cinnamic Acid Is a Novel, Natural Auxin Efflux Inhibitor That Promotes Lateral Root Formation
Steenackers W, Klíma P, Quareshy M, ..., Boerjan W, Vanholme B
Plant Physiol. 173 (1) 552-565 [2017-01-00; online 2016-11-11]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
SHADE AVOIDANCE 4 Is Required for Proper Auxin Distribution in the Hypocotyl
Ge Y, Yan F, Zourelidou M, ..., Schwechheimer C, Tao Y
Plant Physiol. 173 (1) 788-800 [2017-01-00; online 2016-11-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
A multi-step peptidolytic cascade for amino acid recovery in chloroplasts.
Teixeira PF, Kmiec B, Branca RM, ..., Lehtiö J, Glaser E
Nat. Chem. Biol. 13 (1) 15-17 [2017-01-00; online 2016-10-31]
Clinical Proteomics Mass spectrometry [Collaborative] Global Proteomics and Proteogenomics [Collaborative] Swedish Metabolomics Centre (SMC) [Service]

Year 2016

PubMed DOI Crossref
Aspen phenylpropanoid genes’ expression levels correlate with genets’ tannin richness and vary both in responses to soil nitrogen and associations with phenolic profiles
Decker VHG, Bandau F, Gundale MJ, Cole CT, Albrectsen BR
Tree Physiol - (-) - [2016-12-15; online 2016-12-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Dissecting the Metabolic Role of Mitochondria during Developmental Leaf Senescence.
Chrobok D, Law SR, Brouwer B, ..., Gardeström P, Keech O
Plant Physiol. 172 (4) 2132-2153 [2016-12-00; online 2016-10-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The Arabidopsis TOR Kinase Specifically Regulates the Expression of Nuclear Genes Coding for Plastidic Ribosomal Proteins and the Phosphorylation of the Cytosolic Ribosomal Protein S6.
Dobrenel T, Mancera-Martínez E, Forzani C, ..., Hanson J, Meyer C
Front Plant Sci 7 (-) 1611 [2016-11-07; online 2016-11-07]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Central Metabolic Responses to Ozone and Herbivory Affect Photosynthesis and Stomatal Closure.
Papazian S, Khaling E, Bonnet C, ..., Blande JD, Albrectsen BR
Plant Physiol. 172 (3) 2057-2078 [2016-11-00; online 2016-10-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Estrogen Receptor α Promotes Breast Cancer by Reprogramming Choline Metabolism.
Jia M, Andreassen T, Jensen L, ..., Moestue SA, Dahlman-Wright K
Cancer Res. 76 (19) 5634-5646 [2016-10-01; online 2016-07-28]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolomic Quality Assessment of EDTA Plasma and Serum Samples.
Malm L, Tybring G, Moritz T, Landin B, Galli J
Biopreserv Biobank 14 (5) 416-423 [2016-10-00; online 2016-06-27]
Swedish Metabolomics Centre (SMC) [Service]
DOI Crossref
Direct acquisition of organic N by white clover even in the presence of inorganic N
Czaban W, Jämtgård S, Näsholm T, ..., Nicolaisen M, Fomsgaard IS
Plant Soil 407 (1-2) 91-107 [2016-10-00; online 2016-04-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Loss of ncm(5) and mcm(5) wobble uridine side chains results in an altered metabolic profile.
Karlsborn T, Mahmud AK, Tükenmez H, Byström AS
Metabolomics 12 (12) 177 [2016-09-27; online 2016-09-27]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Dioxygenase-encoding AtDAO1 gene controls IAA oxidation and homeostasis in Arabidopsis.
Porco S, Pěnčík A, Rashed A, ..., Bennett MJ, Ljung K
Proc. Natl. Acad. Sci. U.S.A. 113 (39) 11016-11021 [2016-09-27; online 2016-09-22]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Overlap in serum metabolic profiles between non-related diseases: Implications for LC-MS metabolomics biomarker discovery.
Lindahl A, Forshed J, Nordström A
Biochem. Biophys. Res. Commun. 478 (3) 1472-1477 [2016-09-23; online 2016-08-28]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolic Profiling of Systemic Lupus Erythematosus and Comparison with Primary Sjögren's Syndrome and Systemic Sclerosis.
Bengtsson AA, Trygg J, Wuttge DM, ..., Rännar S, Lundstedt T
PLoS ONE 11 (7) e0159384 [2016-07-21; online 2016-07-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
The Effects of High Steady State Auxin Levels on Root Cell Elongation in Brachypodium.
Pacheco-Villalobos D, Díaz-Moreno SM, van der Schuren A, ..., Bulone V, Hardtke CS
Plant Cell - (-) - [2016-05-05; online 2016-05-05]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Reduced mitochondrial malate dehydrogenase activity has a strong effect on photorespiratory metabolism as revealed by 13C labelling.
Lindén P, Keech O, Stenlund H, Gardeström P, Moritz T
J. Exp. Bot. 67 (10) 3123-3135 [2016-05-00; online 2016-02-19]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolomics study of fatigue in patients with rheumatoid arthritis naïve to biological treatment.
Surowiec I, Gjesdal CG, Jonsson G, ..., Trygg J, Omdal R
Rheumatol. Int. 36 (5) 703-711 [2016-05-00; online 2016-01-25]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
TOR Signaling and Nutrient Sensing.
Dobrenel T, Caldana C, Hanson J, ..., Veit B, Meyer C
Annu Rev Plant Biol 67 (-) 261-285 [2016-04-29; online 2016-02-26]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
PGC-1α Coordinates Mitochondrial Respiratory Capacity and Muscular Fatty Acid Uptake via Regulation of VEGF-B.
Mehlem A, Palombo I, Wang X, ..., Eriksson U, Falkevall A
Diabetes 65 (4) 861-873 [2016-04-00; online 2016-01-30]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Multi-platform mass spectrometry analysis of the CSF and plasma metabolomes of rigorously matched amyotrophic lateral sclerosis, Parkinson's disease and control subjects.
Wuolikainen A, Jonsson P, Ahnlund M, ..., Andersen PM, Trupp M
Mol Biosyst 12 (4) 1287-1298 [2016-04-00; online 2016-02-18]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Local auxin metabolism regulates environment-induced hypocotyl elongation
Zheng Z, Guo Y, Novák O, ..., Noel JP, Chory J
NPLANTS 2 (4) 16025 [2016-03-21; online 2016-03-21]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Rat Prostate Tumor Cells Progress in the Bone Microenvironment to a Highly Aggressive Phenotype.
Bergström SH, Rudolfsson SH, Bergh A
Neoplasia 18 (3) 152-161 [2016-03-00; online 2016-03-20]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Quantitative Auxin Metabolite Profiling Using Stable Isotope Dilution UHPLC-MS/MS.
Novák O, Pěnčík A, Blahoušek O, Ljung K
Curr Protoc Plant Biol 1 (2) 419-430 [2016-03-00; online 2016-03-01]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development.
Obudulu O, Bygdell J, Sundberg B, ..., Trygg J, Wingsle G
BMC Genomics 17 (-) 119 [2016-02-18; online 2016-02-18]
Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Postprandial metabolomics: A pilot mass spectrometry and NMR study of the human plasma metabolome in response to a challenge meal.
Karimpour M, Surowiec I, Wu J, ..., Zivkovic AM, Nording ML
Anal. Chim. Acta 908 (-) 121-131 [2016-02-18; online 2016-01-31]
Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Tissue sample stability: thawing effect on multi-organ samples
Torell F, Bennett K, Cereghini S, ..., Trygg J, Lundstedt T
Metabolomics 12 (2) - [2016-02-00; online 2015-12-31]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Metabolites in Blood for Prediction of Bacteremic Sepsis in the Emergency Room.
Kauppi AM, Edin A, Ziegler I, ..., Strålin K, Johansson A
PLoS ONE 11 (1) e0147670 [2016-01-22; online 2016-01-22]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light.
Pedmale UV, Huang SS, Zander M, ..., Ecker JR, Chory J
Cell 164 (1-2) 233-245 [2016-01-14; online 2016-01-05]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Serum Trimethylamine-N-Oxide Is Strongly Related to Renal Function and Predicts Outcome in Chronic Kidney Disease.
Missailidis C, Hällqvist J, Qureshi AR, ..., Stenvinkel P, Bergman P
PLoS ONE 11 (1) e0141738 [2016-01-11; online 2016-01-11]
Swedish Metabolomics Centre (SMC) [Collaborative]
PubMed DOI Crossref
Oxylipins, endocannabinoids, and related compounds in human milk: Levels and effects of storage conditions.
Wu J, Gouveia-Figueira S, Domellöf M, Zivkovic AM, Nording ML
Prostaglandins Other Lipid Mediat. 122 (-) 28-36 [2016-01-00; online 2015-12-15]
Swedish Metabolomics Centre (SMC) [Service]
PubMed DOI Crossref
Increased lanosterol turnover: a metabolic burden for daunorubicin-resistant leukemia cells.
Stäubert C, Krakowsky R, Bhuiyan H, ..., Broom O, Nordström A
Med. Oncol. 33 (1) 6 [2016-01-00; online 2015-12-23]
Swedish Metabolomics Centre (SMC) [Service]

Year 2013

PubMed DOI Crossref
Plasma and erythrocyte glutathione peroxidase activity, serum selenium concentration, and plasma total antioxidant capacity in cats with IRIS stages I-IV chronic kidney disease.
Krofič Žel M, Tozon N, Nemec Svete A
J. Vet. Intern. Med. 28 (1) 130-136 [2013-12-16; online 2013-12-16]
Swedish Metabolomics Centre (SMC) [Service]

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