Chalmers Mass Spectrometry Infrastructure

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Primary: Shown in the list of current labels, if end date is not specified.

Started: 2021

Ended: Current

Year 2024

PubMed DOI Crossref
Effects of Wholegrain Compared to Refined Grain Intake on Cardiometabolic Risk Markers, Gut Microbiota, and Gastrointestinal Symptoms in Children: A Randomized Crossover Trial.
Madsen MTB, Landberg R, Nielsen DS, ..., Lauritzen L, Damsgaard CT
Am. J. Clin. Nutr. 119 (1) 18-28 [2024-01-00; online 2023-10-28]
Chalmers Mass Spectrometry Infrastructure [Collaborative]

Year 2023

DOI Crossref
LC-MS-Based Metabolomics for Dietary Biomarker Discovery in a Cohort of Pregnant and Lactating Women and Their Infants
Stråvik M, Hartvigsson O, Noerman S, ..., Barman M, Sandberg AS
- - (-) - [2023-11-20; online 2023-11-20]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Untargeted plasma metabolomics and risk of colorectal cancer-an analysis nested within a large-scale prospective cohort.
Vidman L, Zheng R, Bodén S, ..., Brunius C, Van Guelpen B
Cancer Metab 11 (1) 17 [2023-10-17; online 2023-10-17]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
The interplay between dietary fatty acids and gut microbiota influences host metabolism and hepatic steatosis.
Schoeler M, Ellero-Simatos S, Birkner T, ..., Burcelin R, Caesar R
Nat Commun 14 (1) 5329 [2023-09-01; online 2023-09-01]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
IBS randomized study: FODMAPs alter bile acids, phenolic- and tryptophan metabolites, while gluten modifies lipids.
Nordin E, Hellström PM, Vuong E, ..., Brunius C, Landberg R
Am. J. Physiol. Regul. Integr. Comp. Physiol. 325 (3) R248-R259 [2023-09-01; online 2023-07-03]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Fine-tuning of p-coumaric acid synthesis to increase (2S)-naringenin production in yeast.
Mao J, Mohedano MT, Fu J, ..., Siewers V, Chen Y
Metab. Eng. 79 (-) 192-202 [2023-09-00; online 2023-08-22]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Cinnamic acid and p-coumaric acid are metabolized to 4-hydroxybenzoic acid by Yarrowia lipolytica.
Konzock O, Tous-Mohedano M, Cibin I, Chen Y, Norbeck J
AMB Express 13 (1) 84 [2023-08-10; online 2023-08-10]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
ReprogrammingYarrowia lipolyticametabolism for efficient synthesis of itaconic acid from flask to semi-pilot scale
Fu J, Zaghen S, Lu H, ..., Di Bartolomeo F, Kerkhoven EJ
- - (-) - [2023-07-18; online 2023-07-18]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Biosensor-Assisted Laboratory Evolution of Malonyl-CoA production inSaccharomyces cerevisiae
Ferreira R, Hedin KA, Nielsen J, David F
- - (-) - [2023-07-17; online 2023-07-17]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Effects of FODMAPs and Gluten on Gut Microbiota and Their Association with the Metabolome in Irritable Bowel Syndrome: A Double-Blind, Randomized, Cross-Over Intervention Study.
Nordin E, Hellström PM, Dicksved J, ..., Landberg R, Brunius C
Nutrients 15 (13) - [2023-07-05; online 2023-07-05]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Metabolic profiles reflect weight loss maintenance and the composition of diet after very-low-energy diet.
Näätänen M, Kårlund A, Mikkonen S, ..., Hanhineva K, Kolehmainen M
Clin Nutr 42 (7) 1126-1141 [2023-07-00; online 2023-05-17]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Combined effects of isolation temperature and pH on functionality and beany flavor of pea protein isolates for meat analogue applications.
Sajib M, Forghani B, Kumar Vate N, Abdollahi M
Food Chem 412 (-) 135585 [2023-06-30; online 2023-01-27]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Restricting Promiscuity of Plant Flavonoid 3'-Hydroxylase and 4'-O-Methyltransferase Improves the Biosynthesis of (2S)-Hesperetin in E. coli.
Liu J, Xiao Z, Zhang S, ..., Chen Y, Shan Y
J. Agric. Food Chem. 71 (25) 9826-9835 [2023-06-28; online 2023-06-13]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Dietary biomarkers and food records indicate compliance to study diets in the ADIRA (Anti-inflammatory Diet In Rheumatoid Arthritis) trial.
Wadell AT, Bärebring L, Hulander E, ..., Lindqvist H, Winkvist A
Front Nutr 10 (-) 1209787 [2023-06-22; online 2023-06-22]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
DOI Crossref
Associations of the placental metabolome with immune maturation up to one year of age in the Swedish NICE-cohort
Hartvigsson O, Barman M, Rabe H, ..., Brunius C, Sandberg AS
- - (-) - [2023-06-15; online 2023-06-15]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Engineering Yeast to Improve Heterologous Abscisic Acid Production
Otto M, Gossing M, David F, Siewers V
- - (-) - [2023-06-08; online 2023-06-08]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
A highly selective cell-based fluorescent biosensor for genistein detection
Chao LFI, Liu D, Siewers V
Engineering Microbiology 3 (2) 100078 [2023-06-00; online 2023-06-00]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Sense and Screen-ability: Development of tuneable, biosensor-based screening platforms for abscisic acid
Otto M, Dabirian Y, David F, Siewers V
- - (-) - [2023-05-18; online 2023-05-18]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Biomarkers of seafood intake during pregnancy - Pollutants versus fatty acids and micronutrients.
Stråvik M, Gustin K, Barman M, ..., Kippler M, Vahter M
Environ. Res. 225 (-) 115576 [2023-05-15; online 2023-03-05]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Optimizing yeast for high-level production of kaempferol and quercetin.
Tartik M, Liu J, Mohedano MT, Mao J, Chen Y
Microb. Cell Fact. 22 (1) 74 [2023-04-20; online 2023-04-20]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Age Rather Than Supplementation with Oat β-Glucan Influences Development of the Intestinal Microbiota and SCFA Concentrations in Suckling Piglets.
Arapovic L, Huang Y, Manell E, ..., Lindberg JE, Dicksved J
Animals (Basel) 13 (8) - [2023-04-14; online 2023-04-14]
Chalmers Mass Spectrometry Infrastructure [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
High-throughput metabolomics for the design and validation of a diauxic shift model.
Brunnsåker D, Reder GK, Soni NK, ..., Tiukova IA, King RD
npj Syst Biol Appl 9 (1) 11 [2023-04-07; online 2023-04-07]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Lingonberry (Vaccinium vitis-idaea) press-cake as a new processing aid during isolation of protein from herring (Clupea harengus) co-products.
Zhang J, Abdollahi M, Ström A, Undeland I
Food Chem X 17 (-) 100592 [2023-03-30; online 2023-02-04]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Novel Insights into the Molecular Mechanisms Underlying Robustness and Stability in Probiotic Bifidobacteria.
Schöpping M, Goel A, Jensen K, ..., Franzén CJ, Zeidan AA
Appl. Environ. Microbiol. 89 (3) e0008223 [2023-03-29; online 2023-02-21]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
A highly efficient transcriptome-based biosynthesis of non-ethanol chemicals in Crabtree negative Saccharomyces cerevisiae.
Yao Z, Guo Y, Wang H, ..., Nielsen J, Dai Z
Biotechnol Biofuels Bioprod 16 (1) 37 [2023-03-04; online 2023-03-04]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Serum metabolites associated with wholegrain consumption using nontargeted metabolic profiling: a discovery and reproducibility study.
Noerman S, Virtanen JK, Lehtonen M, Brunius C, Hanhineva K
Eur J Nutr 62 (2) 713-726 [2023-03-00; online 2022-10-06]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Abolishing storage lipids induces protein misfolding and stress responses inYarrowia lipolytica
Zaghen S, Konzock O, Fu J, Kerkhoven EJ
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY 50 (1) - [2023-02-17; online 2023-09-23]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Identification of metabotypes in complex biological data using tensor decomposition
Skantze V, Wallman M, Sandberg AS, ..., Jirstrand M, Brunius C
Chemometrics and Intelligent Laboratory Systems 233 (-) 104733 [2023-02-00; online 2023-02-00]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Associations of PFAS-related plasma metabolites with cholesterol and triglyceride concentrations.
Schillemans T, Bergdahl IA, Hanhineva K, ..., Åkesson A, Brunius C
Environ. Res. 216 (Pt 2) 114570 [2023-01-01; online 2022-10-13]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]

Year 2022

PubMed DOI Crossref
Plasma Concentrations of Short-Chain Fatty Acids in Active and Recovered Anorexia Nervosa.
Xu J, Landberg R, Lavebratt C, ..., Landén M, Nilsson IAK
Nutrients 14 (24) - [2022-12-09; online 2022-12-09]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Fecal Luminal Factors from Patients with Gastrointestinal Diseases Alter Gene Expression Profiles in Caco-2 Cells and Colonoids.
Holst LM, Iribarren C, Sapnara M, ..., Magnusson MK, Öhman L
Int J Mol Sci 23 (24) - [2022-12-07; online 2022-12-07]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Lower plasma concentrations of short-chain fatty acids (SCFAs) in patients with ADHD.
Yang LL, Stiernborg M, Skott E, ..., Giacobini M, Lavebratt C
J Psychiatr Res 156 (-) 36-43 [2022-12-00; online 2022-09-28]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Metabolite Pattern Derived from Lactiplantibacillus plantarum-Fermented Rye Foods and In Vitro Gut Fermentation Synergistically Inhibits Bacterial Growth.
Koistinen VM, Hedberg M, Shi L, ..., Hanhineva K, Landberg R
Mol Nutr Food Res 66 (21) e2101096 [2022-11-00; online 2022-08-19]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Differences in Metabolite Composition of Aloe barbadensis Mill. Extracts Lead to Differential Effects on Human Blood T Cell Activity In Vitro.
Ahluwalia B, Magnusson MK, Larsson F, ..., Ross AB, Öhman L
Molecules 27 (19) - [2022-10-06; online 2022-10-06]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Modest Conformity Between Self-Reporting of Bristol Stool Form and Fecal Consistency Measured by Stool Water Content in Irritable Bowel Syndrome and a FODMAP and Gluten Trial.
Nordin E, Hellström PM, Brunius C, Landberg R
Am J Gastroenterol 117 (10) 1668-1674 [2022-10-01; online 2022-08-12]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Fecal luminal factors from patients with irritable bowel syndrome induce distinct gene expression of colonoids.
Iribarren C, Nordlander S, Sundin J, ..., Simrén M, Öhman L
Neurogastroenterol. Motil. 34 (10) e14390 [2022-10-00; online 2022-04-29]
Chalmers Mass Spectrometry Infrastructure [Service] Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Untargeted Metabolomics Based on Liquid Chromatography-Mass Spectrometry for the Analysis of Plasma and Erythrocyte Samples in Childhood Obesity.
González-Domínguez Á, Armeni M, Savolainen O, ..., Landberg R, González-Domínguez R
Methods Mol. Biol. 2571 (-) 115-122 [2022-09-25; online 2022-09-25]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Metabolomic profiles of mid-trimester amniotic fluid are not associated with subsequent spontaneous preterm delivery or gestational duration at delivery.
Hallingström M, Barman M, Savolainen O, ..., Brunius C, Jacobsson B
J Matern Fetal Neonatal Med 35 (11) 2054-2062 [2022-06-00; online 2020-06-16]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Pregnancy outcomes with differences in grain consumption: a randomized controlled trial.
Yamada P, Paetow A, Chan M, ..., Landberg R, Young BK
J Perinat Med 50 (4) 411-418 [2022-05-25; online 2022-01-03]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
A randomized controlled trial of the effects of whole grains versus refined grains diets on the microbiome in pregnancy.
Sun H, Yamada P, Paetow A, ..., Dominguez-Bello MG, Young BK
Sci Rep 12 (1) 7509 [2022-05-07; online 2022-05-07]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
[Correlation between intake of fish or supplements containing omega-3 fatty acids and early pregnancy plasma concentrations.].
Tryggvadottir EA, Halldorsson TI, Birgisdottir BE, ..., Hardardottir H, Gunnarsdottir I
Laeknabladid 108 (5) 238-243 [2022-05-00; online 2022-05-03]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
The Effects of High Fiber Rye, Compared to Refined Wheat, on Gut Microbiota Composition, Plasma Short Chain Fatty Acids, and Implications for Weight Loss and Metabolic Risk Factors (the RyeWeight Study).
Iversen KN, Dicksved J, Zoki C, ..., Langton M, Landberg R
Nutrients 14 (8) - [2022-04-17; online 2022-04-17]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
An inverse association between plasma benzoxazinoid metabolites and PSA after rye intake in men with prostate cancer revealed with a new method.
Nordin E, Steffensen SK, Laursen BB, ..., Fomsgaard IS, Landberg R
Sci Rep 12 (1) 5260 [2022-03-28; online 2022-03-28]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Differences between Arterial and Venous Umbilical Cord Plasma Metabolome and Association with Parity.
Hartvigsson O, Barman M, Savolainen O, ..., Sandberg AS, Brunius C
Metabolites 12 (2) 175 [2022-02-13; online 2022-02-13]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Comprehensive Peak Characterization (CPC) in Untargeted LC-MS Analysis.
Pirttilä K, Balgoma D, Rainer J, ..., Hedeland M, Brunius C
Metabolites 12 (2) - [2022-02-02; online 2022-02-02]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
LongITools: Dynamic longitudinal exposome trajectories in cardiovascular and metabolic noncommunicable diseases.
Ronkainen J, Nedelec R, Atehortua A, ..., Juola T, Sebert S
Environ Epidemiol 6 (1) e184 [2022-02-00; online 2021-12-28]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Vegan Diet Is Associated With Favorable Effects on the Metabolic Performance of Intestinal Microbiota: A Cross-Sectional Multi-Omics Study.
Prochazkova M, Budinska E, Kuzma M, ..., Gojda J, Cahova M
Front Nutr 8 (-) 783302 [2022-01-07; online 2022-01-07]
Chalmers Mass Spectrometry Infrastructure [Service]

Year 2021

PubMed DOI Crossref
Making complex measurements of meat composition fast: Application of rapid evaporative ionisation mass spectrometry to measuring meat quality and fraud.
Ross A, Brunius C, Chevallier O, ..., Zhang R, Vanhaecke L
Meat Sci 181 (-) 108333 [2021-11-00; online 2020-10-06]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
De novo biosynthesis of bioactive isoflavonoids by engineered yeast cell factories.
Liu Q, Liu Y, Li G, ..., Chen Y, Nielsen J
Nat Commun 12 (1) 6085 [2021-10-19; online 2021-10-19]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Prediction and evaluation of the effect of pre-centrifugation sample management on the measurable untargeted LC-MS plasma metabolome.
Zheng R, Brunius C, Shi L, ..., Landberg R, Naluai ÅT
Anal. Chim. Acta 1182 (-) 338968 [2021-10-16; online 2021-08-19]
Chalmers Mass Spectrometry Infrastructure [Technology development]
PubMed DOI Crossref
Associations of maternal and infant metabolomes with immune maturation and allergy development at 12 months in the Swedish NICE-cohort.
Hartvigsson O, Barman M, Rabe H, ..., Brunius C, Sandberg AS
Sci Rep 11 (1) 12706 [2021-06-16; online 2021-06-16]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Impaired Luminal Control of Intestinal Macrophage Maturation in Patients With Ulcerative Colitis During Remission.
Maasfeh L, Härtlova A, Isaksson S, ..., Öhman L, Magnusson MK
Cellular and Molecular Gastroenterology and Hepatology 12 (4) 1415-1432 [2021-06-12; online 2021-06-12]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
A Distinct Faecal Microbiota and Metabolite Profile Linked to Bowel Habits in Patients with Irritable Bowel Syndrome.
Ahluwalia B, Iribarren C, Magnusson MK, ..., Simrén M, Öhman L
Cells 10 (6) - [2021-06-10; online 2021-06-10]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Expanding functional protein sequence spaces using generative adversarial networks
Repecka D, Jauniskis V, Karpus L, ..., Engqvist MKM, Zelezniak A
Nat Mach Intell 3 (4) 324-333 [2021-03-04; online 2021-03-04]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
A polysaccharide utilization locus from the gut bacterium Dysgonomonas mossii encodes functionally distinct carbohydrate esterases.
Kmezik C, Mazurkewich S, Meents T, ..., Brändén G, Larsbrink J
J. Biol. Chem. 296 (-) 100500 [2021-03-02; online 2021-03-02]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Umbilical cord blood metabolome differs in relation to delivery mode, birth order and sex, maternal diet and possibly future allergy development in rural children.
Ross AB, Barman M, Hartvigsson O, ..., Wold AE, Sandberg AS
PLoS ONE 16 (1) e0242978 [2021-01-25; online 2021-01-25]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Porphyromonas gingivalis Produce Neutrophil Specific Chemoattractants Including Short Chain Fatty Acids.
Dahlstrand Rudin A, Khamzeh A, Venkatakrishnan V, ..., Christenson K, Bylund J
Front. Cell. Infect. Microbiol. 10 (-) 620681 [2021-01-19; online 2021-01-19]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Plasma metabolites associated with exposure to perfluoroalkyl substances and risk of type 2 diabetes - A nested case-control study.
Schillemans T, Shi L, Donat-Vargas C, ..., Åkesson A, Brunius C
Environ Int 146 (-) 106180 [2021-01-00; online 2020-10-25]
Chalmers Mass Spectrometry Infrastructure [Service]
SciLifeLab Data Centre
Publications 9.5.0