Chalmers Mass Spectrometry Infrastructure

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Primary: Shown in the list of current labels, if end date is not specified.

Started: 2021

Ended: Current

Year 2025

PubMed DOI Crossref
Cold-induced serum short-chain fatty acids act as markers of brown adipose tissue metabolism in humans.
Monfort-Pires M, U-Din M, de Mello V, ..., Klingenspor M, Virtanen KA
J. Clin. Endocrinol. Metab. - (-) - [2025-11-05; online 2025-11-05]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
DOI Crossref
Do 6-9-Year-Old Children in Denmark Adhere to National Dietary Recommendations and Are There Sociodemographic Disparities? The Generation Healthy Kids Study
Holmegaard F, Eilersen AG, Lauritzen L, ..., Toft U, Trab C
- - (-) - [2025-10-16; online 2025-10-16]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Harmonizing human plasma metabolite annotation with Plasma Benchmark.
Koistinen V, Meuronen T, Keski-Rahkonen P, ..., Scalbert A, Hanhineva K
Nat Metab 7 (10) 1955-1957 [2025-10-00; online 2025-09-12]
Chalmers Mass Spectrometry Infrastructure [Technology development]
PubMed DOI Crossref
Add-on probiotics for inflammatory depression - A double-blind randomized placebo-controlled trial.
Söderberg Veibäck G, Lindahl J, Suneson K, ..., Wolkowitz OM, Lindqvist D
Brain, Behavior, and Immunity 129 (-) 348-358 [2025-10-00; online 2025-06-06]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Method development and validation for quantitative determination of urinary biomarkers of food intake for multiple foods.
Hassenberg C, Soukup ST, Armeni M, ..., Kulling SE, Mack CI
Journal of Chromatography B 1268 (-) 124793 [2025-09-15; online 2025-09-15]
Chalmers Mass Spectrometry Infrastructure [Technology development]
PubMed DOI Crossref
Avenanthramides and avenacosides as biomarkers of oat intake: a pharmacokinetic study of solid and liquid oat consumption under single and repeated dose conditions.
Armeni M, Cardilin T, Fristedt R, ..., Savolainen O, Landberg R
Nutr J 24 (1) 136 [2025-09-09; online 2025-09-09]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Metabolite Biomarkers Linking a High-Fiber Rye Intervention with Cardiometabolic Risk Factors: The RyeWeight Study.
Unión Caballero A, Meroño T, Åberg S, ..., Landberg R, Andrés-Lacueva C
J. Agric. Food Chem. 73 (35) 21869-21879 [2025-09-03; online 2025-08-21]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Insulin resistance as a potential driving force of parental obesity-induced adverse metabolic programming mechanisms in children with obesity.
Jurado-Sumariva L, González-Domínguez Á, Savolainen O, ..., Landberg R, González-Domínguez R
BMC Med 23 (1) 458 [2025-08-05; online 2025-08-05]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Cafestol and kahweol concentrations in workplace machine coffee compared with conventional brewing methods.
Orrje E, Fristedt R, Rosqvist F, Landberg R, Iggman D
Nutr Metab Cardiovasc Dis 35 (8) 103933 [2025-08-00; online 2025-02-20]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Advanced Microbiome Therapeutics Accelerate MASLD Recovery by Restoring Intestinal Microbiota Equilibrium and the Gut-Liver Axis in a Mouse Model.
Lok J, Chen C, Iannone V, ..., El-Nezami H, Gómez-Gallego C
J. Agric. Food Chem. 73 (24) 15199-15214 [2025-06-18; online 2025-06-06]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Daily profiles of plasma short-chain fatty acids after the intake of three different cereal fibers: a randomized controlled study.
Costabile G, Vitale M, Testa R, ..., Riccardi G, Giacco R
Eur J Nutr 64 (5) 217 [2025-06-11; online 2025-06-11]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
An Investigation of TDA1 Deficiency in Saccharomyces cerevisiae During Diauxic Growth.
Bjurström EY, Lasin P, Brunnsåker D, Tiukova IA, King RD
Yeast 42 (5-7) 142-156 [2025-06-00; online 2025-06-26]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Modular deregulation of central carbon metabolism for efficient xylose utilization in Saccharomyces cerevisiae.
Li X, Wang Y, Chen X, ..., Nielsen J, Chen Y
Nat Commun 16 (1) 4551 [2025-05-16; online 2025-05-16]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Effects of lipid-based nutrient supplements on gut markers in stunted children: Secondary analysis of a randomised trial.
Pesu H, Mbabazi J, Mutumba R, ..., Friis H, Grenov B
J Pediatr Gastroenterol Nutr 80 (5) 889-898 [2025-05-00; online 2025-03-03]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Omics Approach for Personalised Prevention of Type 2 Diabetes Mellitus for African and European Populations (OPTIMA): a protocol paper.
Goedecke JH, Danquah I, Abidha CA, ..., Landberg R, Olsson T
BMJ Open 15 (4) e099108 [2025-04-22; online 2025-04-22]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Plasma Alkylresorcinols Is an Objective Biomarker for Gluten Intake in Young Children.
Af Segerstad EMH, Ericson-Hallström E, Bokström A, ..., Savolainen O, Andrén Aronsson C
J. Nutr. 155 (3) 985-993 [2025-03-00; online 2025-01-27]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Impact of glucose and propionic acid on even and odd chain fatty acid profiles of oleaginous yeasts.
Bonzanini V, Haddad Momeni M, Olofsson K, Olsson L, Geijer C
BMC Microbiol. 25 (1) 79 [2025-02-18; online 2025-02-18]
Chalmers Mass Spectrometry Infrastructure [Service]

Year 2024

PubMed DOI Crossref
Gut microbiota and gut-derived metabolites are altered and associated with dietary intake in women with polycystic ovary syndrome.
da Silva TR, Marchesan LB, Rampelotto PH, ..., de Mello V, Spritzer PM
J Ovarian Res 17 (1) 232 [2024-11-22; online 2024-11-22]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
De novo production of protoberberine and benzophenanthridine alkaloids through metabolic engineering of yeast.
Jiao X, Fu X, Li Q, ..., Nielsen J, Chen Y
Nat Commun 15 (1) 8759 [2024-10-09; online 2024-10-09]
Chalmers Mass Spectrometry Infrastructure [Collaborative] Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Orthogonal Phase Transfer of Oppositely Charged FeII 4L6 Cages.
Matic ES, Bernard M, Jernstedt AJ, Grommet AB
Chemistry - (-) e202403411 [2024-10-07; online 2024-10-07]
Chalmers Mass Spectrometry Infrastructure [Collaborative] Swedish NMR Centre [Service]
PubMed DOI Crossref
Exposure of Colon-Derived Epithelial Monolayers to Fecal Luminal Factors from Patients with Colon Cancer and Ulcerative Colitis Results in Distinct Gene Expression Patterns.
Magnusson MK, Bas Forsberg A, Verveda A, ..., Simrén M, Öhman L
Int J Mol Sci 25 (18) - [2024-09-13; online 2024-09-13]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Probing erythrocytes as sensitive and reliable sensors of metabolic disturbances in the crosstalk between childhood obesity and insulin resistance: findings from an observational study, in vivo challenge tests, and ex vivo incubation assays.
González-Domínguez Á, Savolainen O, Domínguez-Riscart J, ..., Lechuga-Sancho A, González-Domínguez R
Cardiovasc Diabetol 23 (1) 336 [2024-09-11; online 2024-09-11]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Identifying metabotypes of insulin resistance severity in children with metabolic syndrome.
González-Domínguez Á, Domínguez-Riscart J, Savolainen O, ..., Landberg R, González-Domínguez R
Cardiovasc Diabetol 23 (1) 315 [2024-08-27; online 2024-08-27]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Reprogramming Yarrowia lipolytica metabolism for efficient synthesis of itaconic acid from flask to semipilot scale.
Fu J, Zaghen S, Lu H, ..., Di Bartolomeo F, Kerkhoven EJ
Sci Adv 10 (32) eadn0414 [2024-08-09; online 2024-08-09]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Soluble and hydrolyzable phenolic compounds in date fruits (Phoenix dactylifera L.) by UPLC-QTOF-MS/MS and UPLC-DAD
Alam MZ, Fristedt R, Landberg R, Kamal-Eldin A
Journal of Food Composition and Analysis 132 (-) 106354 [2024-08-00; online 2024-08-00]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Quantitation of circulating short-chain fatty acids in small volume blood samples from animals and humans.
Fristedt R, Ruppert V, Trower T, Cooney J, Landberg R
Talanta 272 (-) 125743 [2024-05-15; online 2024-02-03]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Fasting plasma metabolites reflecting meat consumption and their associations with incident type 2 diabetes in two Swedish cohorts.
Noerman S, Johansson A, Shi L, ..., Brunius C, Landberg R
Am. J. Clin. Nutr. 119 (5) 1280-1292 [2024-05-00; online 2024-02-23]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Biomarker Candidates of Habitual Food Intake in a Swedish Cohort of Pregnant and Lactating Women and Their Infants.
Stråvik M, Hartvigsson O, Noerman S, ..., Barman M, Sandberg AS
Metabolites 14 (5) - [2024-04-29; online 2024-04-29]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Adjusting for covariates and assessing modeling fitness in machine learning using MUVR2.
Yan Y, Schillemans T, Skantze V, Brunius C
Bioinform Adv 4 (1) vbae051 [2024-04-04; online 2024-04-04]
Chalmers Mass Spectrometry Infrastructure [Technology development]
PubMed DOI Crossref
AutonoMS: Automated Ion Mobility Metabolomic Fingerprinting.
Reder GK, Bjurström EY, Brunnsåker D, ..., McLean JA, King RD
J. Am. Soc. Mass Spectrom. 35 (3) 542-550 [2024-03-06; online 2024-02-04]
Chalmers Mass Spectrometry Infrastructure [Technology development]
PubMed DOI Crossref
Temporal stability of fecal metabolomic profiles in irritable bowel syndrome.
Iribarren C, Savolainen O, Sapnara M, ..., Magnusson MK, Öhman L
Neurogastroenterol. Motil. 36 (3) e14741 [2024-03-00; online 2024-01-19]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Associations of the placental metabolome with immune maturation up to one year of age in the Swedish NICE-cohort.
Hartvigsson O, Barman M, Rabe H, ..., Brunius C, Sandberg A
Metabolomics 20 (2) 28 [2024-02-26; online 2024-02-26]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Exploration of differential responses to FODMAPs and gluten in people with irritable bowel syndrome- a double-blind randomized cross-over challenge study.
Nordin E, Landberg R, Hellström PM, Brunius C
Metabolomics 20 (2) 21 [2024-02-12; online 2024-02-12]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Correlates of Plasma Citrulline, a Potential Marker of Enterocyte Mass, among Children with Stunting: A Cross-Sectional Study in Uganda.
Pesu H, Mbabazi J, Mutumba R, ..., Friis H, Grenov B
J. Nutr. 154 (2) 765-776 [2024-02-00; online 2023-12-21]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Dietary patterns, untargeted metabolite profiles and their association with colorectal cancer risk.
Bodén S, Zheng R, Ribbenstedt A, ..., Van Guelpen B, Brunius C
Sci Rep 14 (1) 2244 [2024-01-26; online 2024-01-26]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
QComics: Recommendations and Guidelines for Robust, Easily Implementable and Reportable Quality Control of Metabolomics Data.
González-Domínguez Á, Estanyol-Torres N, Brunius C, Landberg R, González-Domínguez R
Anal. Chem. 96 (3) 1064-1072 [2024-01-23; online 2024-01-05]
Chalmers Mass Spectrometry Infrastructure [Technology development]
PubMed DOI Crossref
OMICs Signatures Linking Persistent Organic Pollutants to Cardiovascular Disease in the Swedish Mammography Cohort.
Schillemans T, Yan Y, Ribbenstedt A, ..., Åkesson A, Brunius C
Environ. Sci. Technol. 58 (2) 1036-1047 [2024-01-16; online 2024-01-04]
Affinity Proteomics Uppsala [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Effects of Wholegrain Compared to Refined Grain Intake on Cardiometabolic Risk Markers, Gut Microbiota, and Gastrointestinal Symptoms in Children: A Randomized Crossover Trial.
Madsen MTB, Landberg R, Nielsen DS, ..., Lauritzen L, Damsgaard CT
Am. J. Clin. Nutr. 119 (1) 18-28 [2024-01-00; online 2023-10-28]
Chalmers Mass Spectrometry Infrastructure [Collaborative]

Year 2023

DOI Crossref
LC-MS-Based Metabolomics for Dietary Biomarker Discovery in a Cohort of Pregnant and Lactating Women and Their Infants
Stråvik M, Hartvigsson O, Noerman S, ..., Barman M, Sandberg AS
- - (-) - [2023-11-20; online 2023-11-20]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Untargeted plasma metabolomics and risk of colorectal cancer-an analysis nested within a large-scale prospective cohort.
Vidman L, Zheng R, Bodén S, ..., Brunius C, Van Guelpen B
Cancer Metab 11 (1) 17 [2023-10-17; online 2023-10-17]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
The interplay between dietary fatty acids and gut microbiota influences host metabolism and hepatic steatosis.
Schoeler M, Ellero-Simatos S, Birkner T, ..., Burcelin R, Caesar R
Nat Commun 14 (1) 5329 [2023-09-01; online 2023-09-01]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
IBS randomized study: FODMAPs alter bile acids, phenolic- and tryptophan metabolites, while gluten modifies lipids.
Nordin E, Hellström PM, Vuong E, ..., Brunius C, Landberg R
Am. J. Physiol. Regul. Integr. Comp. Physiol. 325 (3) R248-R259 [2023-09-01; online 2023-07-03]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Fine-tuning of p-coumaric acid synthesis to increase (2S)-naringenin production in yeast.
Mao J, Mohedano MT, Fu J, ..., Siewers V, Chen Y
Metab. Eng. 79 (-) 192-202 [2023-09-00; online 2023-08-22]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Cinnamic acid and p-coumaric acid are metabolized to 4-hydroxybenzoic acid by Yarrowia lipolytica.
Konzock O, Tous-Mohedano M, Cibin I, Chen Y, Norbeck J
AMB Express 13 (1) 84 [2023-08-10; online 2023-08-10]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
ReprogrammingYarrowia lipolyticametabolism for efficient synthesis of itaconic acid from flask to semi-pilot scale
Fu J, Zaghen S, Lu H, ..., Di Bartolomeo F, Kerkhoven EJ
- - (-) - [2023-07-18; online 2023-07-18]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Biosensor-Assisted Laboratory Evolution of Malonyl-CoA production inSaccharomyces cerevisiae
Ferreira R, Hedin KA, Nielsen J, David F
- - (-) - [2023-07-17; online 2023-07-17]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Effects of FODMAPs and Gluten on Gut Microbiota and Their Association with the Metabolome in Irritable Bowel Syndrome: A Double-Blind, Randomized, Cross-Over Intervention Study.
Nordin E, Hellström PM, Dicksved J, ..., Landberg R, Brunius C
Nutrients 15 (13) - [2023-07-05; online 2023-07-05]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Metabolic profiles reflect weight loss maintenance and the composition of diet after very-low-energy diet.
Näätänen M, Kårlund A, Mikkonen S, ..., Hanhineva K, Kolehmainen M
Clin Nutr 42 (7) 1126-1141 [2023-07-00; online 2023-05-17]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Combined effects of isolation temperature and pH on functionality and beany flavor of pea protein isolates for meat analogue applications.
Sajib M, Forghani B, Kumar Vate N, Abdollahi M
Food Chem 412 (-) 135585 [2023-06-30; online 2023-01-27]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Restricting Promiscuity of Plant Flavonoid 3'-Hydroxylase and 4'-O-Methyltransferase Improves the Biosynthesis of (2S)-Hesperetin in E. coli.
Liu J, Xiao Z, Zhang S, ..., Chen Y, Shan Y
J. Agric. Food Chem. 71 (25) 9826-9835 [2023-06-28; online 2023-06-13]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Dietary biomarkers and food records indicate compliance to study diets in the ADIRA (Anti-inflammatory Diet In Rheumatoid Arthritis) trial.
Wadell AT, Bärebring L, Hulander E, ..., Lindqvist H, Winkvist A
Front Nutr 10 (-) 1209787 [2023-06-22; online 2023-06-22]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
DOI Crossref
Engineering Yeast to Improve Heterologous Abscisic Acid Production
Otto M, Gossing M, David F, Siewers V
- - (-) - [2023-06-08; online 2023-06-08]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
A highly selective cell-based fluorescent biosensor for genistein detection
Chao LFI, Liu D, Siewers V
Engineering Microbiology 3 (2) 100078 [2023-06-00; online 2023-06-00]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Sense and Screen-ability: Development of tuneable, biosensor-based screening platforms for abscisic acid
Otto M, Dabirian Y, David F, Siewers V
- - (-) - [2023-05-18; online 2023-05-18]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Biomarkers of seafood intake during pregnancy - Pollutants versus fatty acids and micronutrients.
Stråvik M, Gustin K, Barman M, ..., Kippler M, Vahter M
Environ. Res. 225 (-) 115576 [2023-05-15; online 2023-03-05]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Optimizing yeast for high-level production of kaempferol and quercetin.
Tartik M, Liu J, Mohedano MT, Mao J, Chen Y
Microb. Cell Fact. 22 (1) 74 [2023-04-20; online 2023-04-20]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Age Rather Than Supplementation with Oat β-Glucan Influences Development of the Intestinal Microbiota and SCFA Concentrations in Suckling Piglets.
Arapovic L, Huang Y, Manell E, ..., Lindberg JE, Dicksved J
Animals (Basel) 13 (8) - [2023-04-14; online 2023-04-14]
Chalmers Mass Spectrometry Infrastructure [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
High-throughput metabolomics for the design and validation of a diauxic shift model.
Brunnsåker D, Reder GK, Soni NK, ..., Tiukova IA, King RD
npj Syst Biol Appl 9 (1) 11 [2023-04-07; online 2023-04-07]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Lingonberry (Vaccinium vitis-idaea) press-cake as a new processing aid during isolation of protein from herring (Clupea harengus) co-products.
Zhang J, Abdollahi M, Ström A, Undeland I
Food Chem X 17 (-) 100592 [2023-03-30; online 2023-02-04]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Novel Insights into the Molecular Mechanisms Underlying Robustness and Stability in Probiotic Bifidobacteria.
Schöpping M, Goel A, Jensen K, ..., Franzén CJ, Zeidan AA
Appl. Environ. Microbiol. 89 (3) e0008223 [2023-03-29; online 2023-02-21]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
A highly efficient transcriptome-based biosynthesis of non-ethanol chemicals in Crabtree negative Saccharomyces cerevisiae.
Yao Z, Guo Y, Wang H, ..., Nielsen J, Dai Z
Biotechnol Biofuels Bioprod 16 (1) 37 [2023-03-04; online 2023-03-04]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Serum metabolites associated with wholegrain consumption using nontargeted metabolic profiling: a discovery and reproducibility study.
Noerman S, Virtanen JK, Lehtonen M, Brunius C, Hanhineva K
Eur J Nutr 62 (2) 713-726 [2023-03-00; online 2022-10-06]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Abolishing storage lipids induces protein misfolding and stress responses in Yarrowia lipolytica.
Zaghen S, Konzock O, Fu J, Kerkhoven EJ
J Ind Microbiol Biotechnol 50 (1) - [2023-02-17; online 2023-09-24]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Identification of metabotypes in complex biological data using tensor decomposition
Skantze V, Wallman M, Sandberg AS, ..., Jirstrand M, Brunius C
Chemometrics and Intelligent Laboratory Systems 233 (-) 104733 [2023-02-00; online 2023-02-00]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Associations of PFAS-related plasma metabolites with cholesterol and triglyceride concentrations.
Schillemans T, Bergdahl IA, Hanhineva K, ..., Åkesson A, Brunius C
Environ. Res. 216 (Pt 2) 114570 [2023-01-01; online 2022-10-13]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]

Year 2022

PubMed DOI Crossref
Plasma Concentrations of Short-Chain Fatty Acids in Active and Recovered Anorexia Nervosa.
Xu J, Landberg R, Lavebratt C, ..., Landén M, Nilsson IAK
Nutrients 14 (24) - [2022-12-09; online 2022-12-09]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Fecal Luminal Factors from Patients with Gastrointestinal Diseases Alter Gene Expression Profiles in Caco-2 Cells and Colonoids.
Holst LM, Iribarren C, Sapnara M, ..., Magnusson MK, Öhman L
Int J Mol Sci 23 (24) - [2022-12-07; online 2022-12-07]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Lower plasma concentrations of short-chain fatty acids (SCFAs) in patients with ADHD.
Yang LL, Stiernborg M, Skott E, ..., Giacobini M, Lavebratt C
J Psychiatr Res 156 (-) 36-43 [2022-12-00; online 2022-09-28]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Metabolite Pattern Derived from Lactiplantibacillus plantarum-Fermented Rye Foods and In Vitro Gut Fermentation Synergistically Inhibits Bacterial Growth.
Koistinen VM, Hedberg M, Shi L, ..., Hanhineva K, Landberg R
Mol Nutr Food Res 66 (21) e2101096 [2022-11-00; online 2022-08-19]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Differences in Metabolite Composition of Aloe barbadensis Mill. Extracts Lead to Differential Effects on Human Blood T Cell Activity In Vitro.
Ahluwalia B, Magnusson MK, Larsson F, ..., Ross AB, Öhman L
Molecules 27 (19) - [2022-10-06; online 2022-10-06]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Modest Conformity Between Self-Reporting of Bristol Stool Form and Fecal Consistency Measured by Stool Water Content in Irritable Bowel Syndrome and a FODMAP and Gluten Trial.
Nordin E, Hellström PM, Brunius C, Landberg R
Am J Gastroenterol 117 (10) 1668-1674 [2022-10-01; online 2022-08-12]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Fecal luminal factors from patients with irritable bowel syndrome induce distinct gene expression of colonoids.
Iribarren C, Nordlander S, Sundin J, ..., Simrén M, Öhman L
Neurogastroenterol. Motil. 34 (10) e14390 [2022-10-00; online 2022-04-29]
Chalmers Mass Spectrometry Infrastructure [Service] Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Untargeted Metabolomics Based on Liquid Chromatography-Mass Spectrometry for the Analysis of Plasma and Erythrocyte Samples in Childhood Obesity.
González-Domínguez Á, Armeni M, Savolainen O, ..., Landberg R, González-Domínguez R
Methods Mol. Biol. 2571 (-) 115-122 [2022-09-25; online 2022-09-25]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Metabolomic profiles of mid-trimester amniotic fluid are not associated with subsequent spontaneous preterm delivery or gestational duration at delivery.
Hallingström M, Barman M, Savolainen O, ..., Brunius C, Jacobsson B
J Matern Fetal Neonatal Med 35 (11) 2054-2062 [2022-06-00; online 2020-06-16]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Pregnancy outcomes with differences in grain consumption: a randomized controlled trial.
Yamada P, Paetow A, Chan M, ..., Landberg R, Young BK
J Perinat Med 50 (4) 411-418 [2022-05-25; online 2022-01-03]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
A randomized controlled trial of the effects of whole grains versus refined grains diets on the microbiome in pregnancy.
Sun H, Yamada P, Paetow A, ..., Dominguez-Bello MG, Young BK
Sci Rep 12 (1) 7509 [2022-05-07; online 2022-05-07]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
[Correlation between intake of fish or supplements containing omega-3 fatty acids and early pregnancy plasma concentrations.].
Tryggvadottir EA, Halldorsson TI, Birgisdottir BE, ..., Hardardottir H, Gunnarsdottir I
Laeknabladid 108 (5) 238-243 [2022-05-00; online 2022-05-03]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
The Effects of High Fiber Rye, Compared to Refined Wheat, on Gut Microbiota Composition, Plasma Short Chain Fatty Acids, and Implications for Weight Loss and Metabolic Risk Factors (the RyeWeight Study).
Iversen KN, Dicksved J, Zoki C, ..., Langton M, Landberg R
Nutrients 14 (8) - [2022-04-17; online 2022-04-17]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
An inverse association between plasma benzoxazinoid metabolites and PSA after rye intake in men with prostate cancer revealed with a new method.
Nordin E, Steffensen SK, Laursen BB, ..., Fomsgaard IS, Landberg R
Sci Rep 12 (1) 5260 [2022-03-28; online 2022-03-28]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Differences between Arterial and Venous Umbilical Cord Plasma Metabolome and Association with Parity.
Hartvigsson O, Barman M, Savolainen O, ..., Sandberg AS, Brunius C
Metabolites 12 (2) 175 [2022-02-13; online 2022-02-13]
Bioinformatics Support for Computational Resources [Service] Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
Comprehensive Peak Characterization (CPC) in Untargeted LC-MS Analysis.
Pirttilä K, Balgoma D, Rainer J, ..., Hedeland M, Brunius C
Metabolites 12 (2) - [2022-02-02; online 2022-02-02]
Chalmers Mass Spectrometry Infrastructure [Collaborative]
PubMed DOI Crossref
LongITools: Dynamic longitudinal exposome trajectories in cardiovascular and metabolic noncommunicable diseases.
Ronkainen J, Nedelec R, Atehortua A, ..., Juola T, Sebert S
Environ Epidemiol 6 (1) e184 [2022-02-00; online 2021-12-28]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Vegan Diet Is Associated With Favorable Effects on the Metabolic Performance of Intestinal Microbiota: A Cross-Sectional Multi-Omics Study.
Prochazkova M, Budinska E, Kuzma M, ..., Gojda J, Cahova M
Front Nutr 8 (-) 783302 [2022-01-07; online 2022-01-07]
Chalmers Mass Spectrometry Infrastructure [Service]

Year 2021

PubMed DOI Crossref
Making complex measurements of meat composition fast: Application of rapid evaporative ionisation mass spectrometry to measuring meat quality and fraud.
Ross A, Brunius C, Chevallier O, ..., Zhang R, Vanhaecke L
Meat Sci 181 (-) 108333 [2021-11-00; online 2020-10-06]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
De novo biosynthesis of bioactive isoflavonoids by engineered yeast cell factories.
Liu Q, Liu Y, Li G, ..., Chen Y, Nielsen J
Nat Commun 12 (1) 6085 [2021-10-19; online 2021-10-19]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Prediction and evaluation of the effect of pre-centrifugation sample management on the measurable untargeted LC-MS plasma metabolome.
Zheng R, Brunius C, Shi L, ..., Landberg R, Naluai ÅT
Anal. Chim. Acta 1182 (-) 338968 [2021-10-16; online 2021-08-19]
Chalmers Mass Spectrometry Infrastructure [Technology development]
PubMed DOI Crossref
Associations of maternal and infant metabolomes with immune maturation and allergy development at 12 months in the Swedish NICE-cohort.
Hartvigsson O, Barman M, Rabe H, ..., Brunius C, Sandberg AS
Sci Rep 11 (1) 12706 [2021-06-16; online 2021-06-16]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Impaired Luminal Control of Intestinal Macrophage Maturation in Patients With Ulcerative Colitis During Remission.
Maasfeh L, Härtlova A, Isaksson S, ..., Öhman L, Magnusson MK
Cellular and Molecular Gastroenterology and Hepatology 12 (4) 1415-1432 [2021-06-12; online 2021-06-12]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
A Distinct Faecal Microbiota and Metabolite Profile Linked to Bowel Habits in Patients with Irritable Bowel Syndrome.
Ahluwalia B, Iribarren C, Magnusson MK, ..., Simrén M, Öhman L
Cells 10 (6) - [2021-06-10; online 2021-06-10]
Chalmers Mass Spectrometry Infrastructure [Service]
DOI Crossref
Expanding functional protein sequence spaces using generative adversarial networks
Repecka D, Jauniskis V, Karpus L, ..., Engqvist MKM, Zelezniak A
Nat Mach Intell 3 (4) 324-333 [2021-03-04; online 2021-03-04]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
A polysaccharide utilization locus from the gut bacterium Dysgonomonas mossii encodes functionally distinct carbohydrate esterases.
Kmezik C, Mazurkewich S, Meents T, ..., Brändén G, Larsbrink J
J. Biol. Chem. 296 (-) 100500 [2021-03-02; online 2021-03-02]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Umbilical cord blood metabolome differs in relation to delivery mode, birth order and sex, maternal diet and possibly future allergy development in rural children.
Ross AB, Barman M, Hartvigsson O, ..., Wold AE, Sandberg AS
PLoS ONE 16 (1) e0242978 [2021-01-25; online 2021-01-25]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Porphyromonas gingivalis Produce Neutrophil Specific Chemoattractants Including Short Chain Fatty Acids.
Dahlstrand Rudin A, Khamzeh A, Venkatakrishnan V, ..., Christenson K, Bylund J
Front. Cell. Infect. Microbiol. 10 (-) 620681 [2021-01-19; online 2021-01-19]
Chalmers Mass Spectrometry Infrastructure [Service]
PubMed DOI Crossref
Plasma metabolites associated with exposure to perfluoroalkyl substances and risk of type 2 diabetes - A nested case-control study.
Schillemans T, Shi L, Donat-Vargas C, ..., Åkesson A, Brunius C
Environ Int 146 (-) 106180 [2021-01-00; online 2020-10-25]
Chalmers Mass Spectrometry Infrastructure [Service]
SciLifeLab Data Centre
Publications 9.5.1