Publications 2017

Title Authors Journal Published Online
InSiDDe: A Server for Designing Artificial Disordered Proteins. Schramm A, Lieutaud P, Gianni S, Longhi S, Bignon C Int J Mol Sci 19 (1) - 2017-12-29 2017-12-29
Targeted copy number screening highlights an intragenic deletion of WDR63 as the likely cause of human occipital encephalocele and abnormal CNS development in zebrafish. Hofmeister W, Pettersson M, Kurtoglu D, ..., Gustavsson P, Lindstrand A Hum. Mutat. - (-) - 2017-12-28 2017-12-28
Methylation-based estimated biological age and cardiovascular disease Lind L, Ingelsson E, Sundström J, Siegbahn A, Lampa E Eur J Clin Invest - (-) e12872 2017-12-27 2017-12-27
Chemical and microbiological evaluation of novel chemical treatment methods for acid sulfate soils. Högfors-Rönnholm E, Christel S, Dalhem K, ..., Österholm P, Dopson M Sci. Total Environ. 625 (-) 39-49 2017-12-26 2017-12-26
Reading and editing the Pleurodeles waltl genome reveals novel features of tetrapod regeneration. Elewa A, Wang H, Talavera-López C, ..., Andersson B, Simon A Nat Commun 8 (1) 2286 2017-12-22 2017-12-22
Low Concentrations of Vitamin C Reduce the Synthesis of Extracellular Polymers and Destabilize Bacterial Biofilms. Pandit S, Ravikumar V, Abdel-Haleem AM, ..., Westerlund F, Mijakovic I Front Microbiol 8 (-) 2599 2017-12-22 2017-12-22
Common founder effects of hereditary hemochromatosis, Wilson´s disease, the long QT syndrome and autosomal recessive deafness caused by two novel mutations in the WHRN and TMC1 genes. Olsson KS, Wålinder O, Jansson U, ..., Raha-Chowdhury R, Williams R Hereditas 154 (1) 16 2017-12-19 2017-12-19
A family-based genome-wide association study of chronic rhinosinusitis with nasal polyps implicates several genes in the disease pathogenesis Bohman A, Juodakis J, Oscarsson M, ..., Bende M, Torinsson Naluai Å PLoS ONE 12 (12) e0185244 2017-12-18 2017-12-18
A chemical screen identifies trifluoperazine as an inhibitor of glioblastoma growth. Pinheiro T, Otrocka M, Seashore-Ludlow B, ..., Simon A, Kirkham M Biochem. Biophys. Res. Commun. 494 (3-4) 477-483 2017-12-16 2017-10-21
Targeting tumor cells based on Phosphodiesterase 3A expression. Nazir M, Senkowski W, Nyberg F, ..., Larsson R, Fryknäs M Exp. Cell Res. 361 (2) 308-315 2017-12-15 2017-10-26
Discovery of the fourth mobile sulfonamide resistance gene. Razavi M, Marathe NP, Gillings MR, ..., Kristiansson E, Joakim Larsson DG Microbiome 5 (1) 160 2017-12-15 2017-12-15
Cancer risk susceptibility loci in a Swedish population. Liu W, Jiao X, Thutkawkorapin J, Mahdessian H, Lindblom A Oncotarget 8 (66) 110300-110310 2017-12-15 2017-11-25
Gene expression and risk of leukemic transformation in myelodysplasia. Shiozawa Y, Malcovati L, Gallì A, ..., Cazzola M, Ogawa S Blood 130 (24) 2642-2653 2017-12-14 2017-11-02
CELSR2 is a candidate susceptibility gene in idiopathic scoliosis Einarsdottir E, Grauers A, Wang J, ..., Kere J, Gerdhem P PLoS ONE 12 (12) e0189591 2017-12-14 2017-12-14
Transcriptomics and Targeted Proteomics Analysis to Gain Insights Into the Immune-control Mechanisms of HIV-1 Infected Elite Controllers. Zhang W, Ambikan AT, Sperk M, ..., Sönnerborg A, Neogi U EBioMedicine - (-) - 2017-12-12 2017-12-12
Comparative cell cycle transcriptomics reveals synchronization of developmental transcription factor networks in cancer cells Boström J, Sramkova Z, Salašová A, ..., Altun M, Andäng M PLoS ONE 12 (12) e0188772 2017-12-11 2017-12-11
Characterization of the Giardia intestinalis secretome during interaction with human intestinal epithelial cells: The impact on host cells Ma’ayeh SY, Liu J, Peirasmaki D, ..., Bergquist J, Svärd SG PLoS Negl Trop Dis 11 (12) e0006120 2017-12-11 2017-12-11
Genomic and phenotypic characteristics of Swedish C. jejuni water isolates. Nilsson A, Johansson C, Skarp A, ..., Engstrand L, Rautelin H PLoS ONE 12 (12) e0189222 2017-12-07 2017-12-07
A Unique ISR Program Determines Cellular Responses to Chronic Stress. Guan BJ, van Hoef V, Jobava R, ..., Larsson O, Hatzoglou M Mol. Cell 68 (5) 885-900.e6 2017-12-07 2017-12-09
Magnesium induces preconditioning of the neonatal brain via profound mitochondrial protection Koning G, Leverin AL, Nair S, ..., Mallard C, Hagberg H J Cereb Blood Flow Metab 39 (6) 1038-1055 2017-12-05 2017-12-05
Heterogeneous Patterns of Genetic Diversity and Differentiation in European and Siberian Chiffchaff ( Phylloscopus collybita abietinus/P. tristis). Talla V, Kalsoom F, Shipilina D, Marova I, Backström N G3 (Bethesda) 7 (12) 3983-3998 2017-12-04 2017-12-04
The Human Plasma Proteome Draft of 2017: Building on the Human Plasma PeptideAtlas from Mass Spectrometry and Complementary Assays. Schwenk JM, Omenn GS, Sun Z, ..., Moritz RL, Deutsch EW J. Proteome Res. 16 (12) 4299-4310 2017-12-01 2017-10-10
Metabolome and transcriptome profiling reveal new insights into somatic embryo germination in Norway spruce (Picea abies). Dobrowolska I, Businge E, Abreu IN, Moritz T, Egertsdotter U Tree Physiol 37 (12) 1752-1766 2017-12-01 2017-10-07
Towards repositioning of quinacrine for treatment of acute myeloid leukemia - Promising synergies and in vivo effects. Eriksson A, Chantzi E, Fryknäs M, ..., Höglund M, Larsson R Leuk Res 63 (-) 41-46 2017-12-00 2017-10-28
The oxylipin and endocannabidome responses in acute phase Plasmodium falciparum malaria in children Surowiec I, Gouveia-Figueira S, Orikiiriza J, ..., Normark J, Trygg J Malar. J. 16 (1) - 2017-12-00 2017-09-08
The dynamic dimer structure of the chaperone Trigger Factor Morgado L, Burmann BM, Sharpe T, Mazur A, Hiller S Nat Commun 8 (1) - 2017-12-00 2017-12-08
Structural basis for dolichylphosphate mannose biosynthesis Gandini R, Reichenbach T, Tan TC, Divne C Nat Commun 8 (1) - 2017-12-00 2017-07-25
Shared genetic origin of asthma, hay fever and eczema elucidates allergic disease biology. Ferreira MA, Vonk JM, Baurecht H, ..., Koppelman GH, Paternoster L Nat. Genet. 49 (12) 1752-1757 2017-12-00 2017-10-30
Rho-kinase inhibitor Y-27632 and hypoxia synergistically enhance chondrocytic phenotype and modify S100 protein profiles in human chondrosarcoma cells Piltti J, Bygdell J, Fernández-Echevarría C, Marcellino D, Lammi MJ Sci Rep 7 (1) - 2017-12-00 2017-06-16
RNA-sequence data normalization through in silico prediction of reference genes: the bacterial response to DNA damage as case study Berghoff BA, Karlsson T, Källman T, Wagner EGH, Grabherr MG BioData Mining 10 (1) - 2017-12-00 2017-09-05
Plasma stem cell factor levels are associated with risk of cardiovascular disease and death. Björkbacka H, Yao Mattisson I, Wigren M, ..., Engström G, Nilsson J J. Intern. Med. 282 (6) 508-521 2017-12-00 2017-09-21
Overexpression of PaNAC03, a stress induced NAC gene family transcription factor in Norway spruce leads to reduced flavonol biosynthesis and aberrant embryo development Dalman K, Wind JJ, Nemesio-Gorriz M, ..., Ezcurra I, Elfstrand M BMC Plant Biol. 17 (1) - 2017-12-00 2017-01-06
Novel risk genes for systemic lupus erythematosus predicted by random forest classification Almlöf JC, Alexsson A, Imgenberg-Kreuz J, ..., Sandling JK, Syvänen AC Sci Rep 7 (1) - 2017-12-00 2017-07-24
Mutational and putative neoantigen load predict clinical benefit of adoptive T cell therapy in melanoma Lauss M, Donia M, Harbst K, ..., Svane IM, Jönsson G Nat Commun 8 (1) - 2017-12-00 2017-11-23
Multiple genotypes within aecial clusters in Puccinia graminis and Puccinia coronata: improved understanding of the biology of cereal rust fungi Berlin A, Samils B, Andersson B Fungal Biol Biotechnol 4 (1) - 2017-12-00 2017-05-03
Mitogenome evolution in the last surviving woolly mammoth population reveals neutral and functional consequences of small population size. Pečnerová P, Palkopoulou E, Wheat CW, ..., Díez-Del-Molino D, Dalén L Evolution Letters 1 (6) 292-303 2017-12-00 2017-11-28
Mechanistic Insights into Autoinhibition of the Oncogenic Chromatin Remodeler ALC1 Lehmann LC, Hewitt G, Aibara S, ..., Boulton SJ, Deindl S Molecular Cell 68 (5) 847-859.e7 2017-12-00 2017-12-00
Mapping of leptin and its syntenic genes to chicken chromosome 1p Seroussi E, Pitel F, Leroux S, ..., Anderson L, Friedman-Einat M BMC Genet. 18 (1) - 2017-12-00 2017-08-09
MALDIViz: A Comprehensive Informatics Tool for MALDI-MS Data Visualization and Analysis. Jagadeesan KK, Ekström S SLAS DISCOVERY: Advancing Life Sciences R&D 22 (10) 1246-1252 2017-12-00 2017-08-21
Low-dose γ-secretase inhibition increases secretion of Aβ peptides and intracellular oligomeric Aβ. Agholme L, Clarin M, Gkanatsiou E, ..., Portelius E, Zetterberg H Molecular and Cellular Neuroscience 85 (-) 211-219 2017-12-00 2017-11-08
Large-scale suppression of recombination predates genomic rearrangements in Neurospora tetrasperma Sun Y, Svedberg J, Hiltunen M, Corcoran P, Johannesson H Nat Commun 8 (1) - 2017-12-00 2017-10-26
Influence of pulsed and continuous substrate inputs on freshwater bacterial community composition and functioning in bioreactors Ricão Canelhas M, Andersson M, Eiler A, Lindström ES, Bertilsson S Environ Microbiol 19 (12) 5078-5087 2017-12-00 2017-12-04
Inflammatory infiltrates in parathyroid tumors. Haglund F, Hallström BM, Nilsson IL, ..., Juhlin CC, Larsson C Eur. J. Endocrinol. 177 (6) 445-453 2017-12-00 2017-08-30
Increasing the permeability of Escherichia coli using MAC13243 Muheim C, Götzke H, Eriksson AU, ..., Nørholm MHH, Daley DO Sci Rep 7 (1) - 2017-12-00 2017-12-15
Identification and description of three families with familial Alzheimer disease that segregate variants in the SORL1 gene Thonberg H, Chiang HH, Lilius L, ..., Rönnbäck A, Graff C Acta Neuropathol Commun 5 (1) - 2017-12-00 2017-06-09
Highly sensitive and specific protein detection via combined capillary isoelectric focusing and proximity ligation Padhan N, Yan J, Boge A, ..., Claesson-Welsh L, Landegren U Sci Rep 7 (1) - 2017-12-00 2017-05-04
High levels of cerebrospinal fluid chemokines point to the presence of neuroinflammation in peripheral neuropathic pain: a cross-sectional study of 2 cohorts of patients compared with healthy controls. Bäckryd E, Lind AL, Thulin M, ..., Gerdle B, Gordh T Pain 158 (12) 2487-2495 2017-12-00 2017-09-21
Genome-wide standing variation facilitates long-term response to bidirectional selection for antibody response in chickens Lillie M, Sheng Z, Honaker CF, ..., Siegel PB, Carlborg Ö BMC Genomics 18 (1) - 2017-12-00 2017-01-18
Genetic- and Lifestyle-dependent Dental Caries Defined by the Acidic Proline-rich Protein Genes PRH1 and PRH2 Strömberg N, Esberg A, Sheng N, ..., Danielsson K, Källestål C EBioMedicine 26 (-) 38-46 2017-12-00 2017-12-00
Filter Plate-Based Screening of MIP SPE Materials for Capture of the Biomarker Pro-Gastrin-Releasing Peptide. Jagadeesan KK, Rossetti C, Abdel Qader A, ..., Laurell T, Ekström S SLAS DISCOVERY: Advancing Life Sciences R&D 22 (10) 1253-1261 2017-12-00 2017-01-31
Elevated Markers of Death Receptor-Activated Apoptosis are Associated with Increased Risk for Development of Diabetes and Cardiovascular Disease. Mattisson IY, Björkbacka H, Wigren M, ..., Almgren P, Nilsson J EBioMedicine 26 (-) 187-197 2017-12-00 2017-11-24
Draft genome of the brown-rot fungus Fomitopsis pinicola GR9-4 Kancherla RP, Durling MB, Stenlid J, Högberg N Data Brief 15 (-) 496-500 2017-12-00 2017-12-00
Development of an efficient route for combined recycling of PET and cotton from mixed fabrics Palme A, Peterson A, de la Motte H, Theliander H, Brelid H Text Cloth Sustain 3 (1) - 2017-12-00 2017-02-22
Detection of QTL for greasy fleece weight in sheep using a 50 K single nucleotide polymorphism chip Ebrahimi F, Gholizadeh M, Rahimi-Mianji G, Farhadi A Trop Anim Health Prod 49 (8) 1657-1662 2017-12-00 2017-08-11
Correspondence on Lovell et al.: identification of chicken genes previously assumed to be evolutionarily lost Bornelöv S, Seroussi E, Yosefi S, ..., Friedman-Einat M, Andersson L Genome Biol. 18 (1) - 2017-12-00 2017-06-14
Comparison of laccase-catalyzed cross-linking of organosolv lignin and lignosulfonates Gillgren T, Hedenström M, Jönsson LJ International Journal of Biological Macromolecules 105 (-) 438-446 2017-12-00 2017-12-00
Combined genome and transcriptome sequencing to investigate the plant cell wall degrading enzyme system in the thermophilic fungus Malbranchea cinnamomea Hüttner S, Nguyen TT, Granchi Z, ..., Thanh VN, Olsson L Biotechnol Biofuels 10 (1) - 2017-12-00 2017-11-13
Brassinosteroid signaling-dependent root responses to prolonged elevated ambient temperature Martins S, Montiel-Jorda A, Cayrel A, ..., Ljung K, Vert G Nat Commun 8 (1) - 2017-12-00 2017-08-21
Automated Training of Deep Convolutional Neural Networks for Cell Segmentation Sadanandan SK, Ranefall P, Le Guyader S, Wählby C Sci Rep 7 (1) - 2017-12-00 2017-08-10
Autoantibodies against aldehyde-modified collagen type IV are associated with risk of development of myocardial infarction. Vallejo J, Dunér P, Fredrikson GN, Nilsson J, Bengtsson E J. Intern. Med. 282 (6) 496-507 2017-12-00 2017-09-25
An essential regulatory function of the DnaK chaperone dictates the decision between proliferation and maintenance in Caulobacter crescentus. Schramm FD, Heinrich K, Thüring M, Bernhardt J, Jonas K PLoS Genet. 13 (12) e1007148 2017-12-00 2017-12-27
Agonist-induced dimer dissociation as a macromolecular step in G protein-coupled receptor signaling Petersen J, Wright SC, Rodríguez D, ..., Carlsson J, Schulte G Nat Commun 8 (1) - 2017-12-00 2017-08-09
A female Viking warrior confirmed by genomics. Hedenstierna-Jonson C, Kjellström A, Zachrisson T, ..., Götherström A, Storå J Am. J. Phys. Anthropol. 164 (4) 853-860 2017-12-00 2017-09-08
A comprehensive structural, biochemical and biological profiling of the human NUDIX hydrolase family Carreras-Puigvert J, Zitnik M, Jemth AS, ..., Zupan B, Helleday T Nat Commun 8 (1) - 2017-12-00 2017-11-16
A short feature vector for image matching: The Log-Polar Magnitude feature descriptor. Matuszewski DJ, Hast A, Wählby C, Sintorn IM PLoS ONE 12 (11) e0188496 2017-11-30 2017-11-30
Intra-tumor heterogeneity in breast cancer has limited impact on transcriptomic-based molecular profiling. Karthik GM, Rantalainen M, Stålhammar G, ..., Bergh J, Hartman J BMC Cancer 17 (1) 802 2017-11-29 2017-11-29
Evidence that circulating proteins are more promising than miRNAs for identification of patients with squamous cell carcinoma of the tongue. Boldrup L, Troiano G, Gu X, ..., Wang L, Nylander K Oncotarget 8 (61) 103437-103448 2017-11-28 2017-09-30
Bliss and Loewe interaction analyses of clinically relevant drug combinations in human colon cancer cell lines reveal complex patterns of synergy and antagonism. Kashif M, Andersson C, Mansoori S, ..., Nygren P, Gustafsson MG Oncotarget 8 (61) 103952-103967 2017-11-28 2017-10-19
STRT-seq-2i: dual-index 5' single cell and nucleus RNA-seq on an addressable microwell array. Hochgerner H, Lönnerberg P, Hodge R, ..., Zeisel A, Linnarsson S Sci Rep 7 (1) 16327 2017-11-27 2017-11-27
Regulatory coiled-coil domains promote head-to-head assemblies of AAA+ chaperones essential for tunable activity control. Carroni M, Franke KB, Maurer M, ..., Bukau B, Mogk A Elife 6 (-) - 2017-11-22 2017-11-22
Genome-Based Sexing Provides Clues about Behavior and Social Structure in the Woolly Mammoth. Pečnerová P, Díez-Del-Molino D, Dussex N, ..., Vartanyan S, Dalén L Curr. Biol. 27 (22) 3505-3510.e3 2017-11-20 2017-11-02
Dog ownership and the risk of cardiovascular disease and death - a nationwide cohort study. Mubanga M, Byberg L, Nowak C, ..., Ingelsson E, Fall T Sci Rep 7 (1) 15821 2017-11-17 2017-11-17
Combined transcriptome and translatome analyses reveal a role for tryptophan-dependent auxin biosynthesis in the control of DOG1-dependent seed dormancy Bai B, Novák O, Ljung K, Hanson J, Bentsink L New Phytol - (-) - 2017-11-15 2017-11-15
Novel KIAA0753 mutations extend the phenotype of skeletal ciliopathies. Hammarsjö A, Wang Z, Vaz R, ..., Grigelioniene G, Ikegawa S Sci Rep 7 (1) 15585 2017-11-14 2017-11-14
Diffusion in Ionic Liquid–Cellulose Solutions during Coagulation in Water: Mass Transport and Coagulation Rate Measurements Hedlund A, Köhnke T, Theliander H Macromolecules 50 (21) 8707-8719 2017-11-14 2017-10-17
Female mice lacking Pald1 exhibit endothelial cell apoptosis and emphysema. Egaña I, Kaito H, Nitzsche A, ..., Hellström M, German Mouse Clinic Consortium Sci Rep 7 (1) 15453 2017-11-13 2017-11-13
Antibody Heavy Chain Variable Domains of Different Germline Gene Origins Diversify through Different Paths Kirik U, Persson H, Levander F, Greiff L, Ohlin M Front Immunol 8 (-) - 2017-11-13 2017-11-13
Integrative analysis of genome-wide gene copy number changes and gene expression in non-small cell lung cancer. Jabs V, Edlund K, König H, ..., Hengstler JG, Micke P PLoS ONE 12 (11) e0187246 2017-11-07 2017-11-07
Adipocyte Expression of SLC19A1 Links DNA Hypermethylation to Adipose Tissue Inflammation and Insulin Resistance Petrus P, Bialesova L, Checa A, ..., Gao H, Rydén M - - (-) - 2017-11-07 2017-11-07
Genomic Analyses of Pre-European Conquest Human Remains from the Canary Islands Reveal Close Affinity to Modern North Africans. Rodríguez-Varela R, Günther T, Krzewińska M, ..., Götherström A, Girdland-Flink L Curr. Biol. 27 (21) 3396-3402.e5 2017-11-06 2017-10-26
Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago. Schlebusch CM, Malmström H, Günther T, ..., Lombard M, Jakobsson M Science 358 (6363) 652-655 2017-11-03 2017-09-28
RNA-Seq de novo assembly and differential transcriptome analysis of the nematode Ascaridia galli in relation to in vivo exposure to flubendazole Martis MM, Tarbiat B, Tydén E, Jansson DS, Höglund J PLoS ONE 12 (11) e0185182 2017-11-03 2017-11-03
Unique case of cerebrotendinous xanthomatosis revisited: All the mutations responsible for this disease are present in the CYP27A1 gene. Jiao H, Olin M, Hansson M, ..., Angelin B, Björkhem I J. Intern. Med. - (-) - 2017-11-02 2017-11-02
Untreated urban waste contaminates Indian river sediments with resistance genes to last resort antibiotics. Marathe NP, Pal C, Gaikwad SS, ..., Kristiansson E, Larsson DGJ Water Res. 124 (-) 388-397 2017-11-01 2017-07-25
Highly HIV-exposed HIV uninfected Kenyan female sex workers display a thick ectocervical epithelium Röhl M, Lajoie J, Tjernlund A, ..., Fowke KR, Broliden K HIV&Hepatitis Nordic Conference, Stockholm, 2017-09-27-29 - (-) - 2017-11-01 -
Cryo-EM reconstruction of the chlororibosome to 3.2 Å resolution within 24 h Forsberg BO, Aibara S, Kimanius D, ..., Lindahl E, Amunts A Int Union Crystallogr J IUCr J Int Union Cryst J IUCrJ 4 (6) 723-727 2017-11-01 2017-09-22
Whole mitochondrial genome capture from faecal samples and museum-preserved specimens. van der Valk T, Lona Durazo F, Dalén L, Guschanski K Mol Ecol Resour 17 (6) e111-e121 2017-11-00 2017-08-03
Type B Response Regulators Act As Central Integrators in Transcriptional Control of the Auxin Biosynthesis Enzyme TAA1 Yan Z, Liu X, Ljung K, ..., Wang M, Tao Y Plant Physiol. 175 (3) 1438-1454 2017-11-00 2017-09-20
SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population. Ameur A, Dahlberg J, Olason P, ..., Magnusson PK, Gyllensten U Eur. J. Hum. Genet. 25 (11) 1253-1260 2017-11-00 2017-08-23
Registration free automatic identification of gold fiducial markers in MRI target delineation images for prostate radiotherapy. Gustafsson C, Korhonen J, Persson E, ..., Nyholm T, Olsson LE Med Phys 44 (11) 5563-5574 2017-11-00 2017-09-11
Rare X Chromosome Abnormalities in Systemic Lupus Erythematosus and Sjögren's Syndrome. Sharma R, Harris VM, Cavett J, ..., Sivils KL, Scofield RH Arthritis & rheumatology (Hoboken, N.J.) 69 (11) 2187-2192 2017-11-00 2017-10-12
Quantitative high-content/high-throughput microscopy analysis of lipid droplets in subject-specific adipogenesis models. Bombrun M, Gao H, Ranefall P, ..., Arner P, Wählby C Cytometry A 91 (11) 1068-1077 2017-11-00 2017-10-14
Proteomic Analysis of Phytophthora infestans Reveals the Importance of Cell Wall Proteins in Pathogenicity Resjö S, Brus M, Ali A, ..., Grenville-Briggs L, Andreasson E Mol Cell Proteomics 16 (11) 1958-1971 2017-11-00 2017-09-21
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation. Svartström O, Alneberg J, Terrapon N, ..., Aspeborg H, Andersson AF ISME J 11 (11) 2538-2551 2017-11-00 2017-07-21
Integrative studies implicate matrix metalloproteinase-12 as a culprit gene for large-artery atherosclerotic stroke Mahdessian H, Perisic Matic L, Lengquist M, ..., Mälarstig A, None J Intern Med 282 (5) 429-444 2017-11-00 2017-08-28
High abundance and expression of transposases in bacteria from the Baltic Sea. Vigil-Stenman T, Ininbergs K, Bergman B, Ekman M ISME J 11 (11) 2611-2623 2017-11-00 2017-07-21
Genotype-based recall to study metabolic effects of genetic variation: a pilot study of PPARG Pro12Ala carriers. Kamble PG, Gustafsson S, Pereira MJ, ..., Eriksson JW, Ingelsson E Ups. J. Med. Sci. 122 (4) 234-242 2017-11-00 2018-01-05
Demographic inference from whole-genome and RAD sequencing data suggests alternating human impacts on goose populations since the last ice age. Pujolar JM, Dalén L, Hansen MM, Madsen J Mol. Ecol. 26 (22) 6270-6283 2017-11-00 2017-11-03
An Expanded Genome-Wide Association Study of Type 2 Diabetes in Europeans Scott RA, Scott LJ, Mägi R, ..., McCarthy MI, Prokopenko I Diabetes 66 (11) 2888-2902 2017-11-00 2017-05-31
A novel approach using long-read sequencing and ddPCR to investigate gonadal mosaicism and estimate recurrence risk in two families with developmental disorders. Wilbe M, Gudmundsson S, Johansson J, ..., Frykholm C, Bondeson ML Prenat. Diagn. 37 (11) 1146-1154 2017-11-00 2017-10-17
A nonsense mutation in CEP55 defines a new locus for a Meckel-like syndrome, an autosomal recessive lethal fetal ciliopathy. Bondeson ML, Ericson K, Gudmundsson S, ..., Frykholm C, Wilbe M Clin. Genet. 92 (5) 510-516 2017-11-00 2017-05-03
Vitamin and Amino Acid Auxotrophy in Anaerobic Consortia Operating under Methanogenic Conditions Hubalek V, Buck M, Tan B, ..., Bertilsson S, Eiler A mSystems 2 (5) e00038-17 2017-10-31 2017-10-31
Orellanine specifically targets renal clear cell carcinoma. Buvall L, Hedman H, Khramova A, ..., Haraldsson B, Nyström J Oncotarget 8 (53) 91085-91098 2017-10-31 2017-07-25
Institutional profile: the national Swedish academic drug discovery & development platform at SciLifeLab. Arvidsson PI, Sandberg K, Sakariassen KS Future Sci. OA 3(2), FSO176 (2) - 2017-10-30 2017-04-07
Exome-wide association study of plasma lipids in >300,000 individuals. Liu DJ, Peloso GM, Yu H, ..., Willer CJ, Kathiresan S Nat. Genet. - (-) - 2017-10-30 2017-10-30
Microbial mineralization of cellulose in frozen soils. Segura JH, Nilsson MB, Haei M, ..., Schleucher J, Öquist MG Nat Commun 8 (1) 1154 2017-10-27 2017-10-27
Combined x-ray crystallography and computational modeling approach to investigate the Hsp90 C-terminal peptide binding to FKBP51. Kumar R, Moche M, Winblad B, Pavlov PF Sci Rep 7 (1) 14288 2017-10-27 2017-10-27
Thiol-ene-epoxy thermoset for low-temperature bonding to biofunctionalized microarray surfaces. Zhou XC, Sjöberg R, Druet A, ..., Haraldsson T, Carlborg CF Lab Chip 17 (21) 3672-3681 2017-10-25 2017-10-05
Efficient protein production by yeast requires global tuning of metabolism. Huang M, Bao J, Hallström BM, Petranovic D, Nielsen J Nat Commun 8 (1) 1131 2017-10-25 2017-10-25
Crystal structures of OrfX2 and P47 from a Botulinum neurotoxin OrfX type gene cluster. Gustafsson R, Berntsson RP, Martínez-Carranza M, ..., Johnson EA, Stenmark P FEBS Lett. - (-) - 2017-10-25 2017-10-25
Polysome-profiling in small tissue samples. Liang S, Bellato HM, Lorent J, ..., Hajj GNM, Larsson O Nucleic Acids Res. - (-) - 2017-10-23 2017-10-23
Below-ground organic matter accumulation along a boreal forest fertility gradient relates to guild interaction within fungal communities Kyaschenko J, Clemmensen KE, Karltun E, Lindahl BD Ecol Lett - (-) - 2017-10-22 2017-10-22
Proteomic analysis of cell cycle progression in asynchronous cultures, including mitotic subphases, using PRIMMUS. Ly T, Whigham A, Clarke R, ..., Wadsworth P, Lamond AI Elife 6 (-) - 2017-10-20 2017-10-20
Effects of long-term low oxygen tension in human chondrosarcoma cells Piltti J, Bygdell J, Qu C, Lammi MJ J. Cell. Biochem. - (-) - 2017-10-18 2017-10-18
Zebrafish larvae as a model system for high-throughput, image-based screens in diabetes and insulin resistance Emmanouilidou A, Ranefall P, Bandaru M, ..., Ingelsson E, den Hoed M ASHG 2017 Annual Meeting - The American Society of Human Genetics - (-) - 2017-10-17 2017-10-17
Zebrafish larvae as a model system for high-throughput, image-based genetic screens in cardiometabolic diseases den Hoed M, Emmanouilidou A, Bandaru M, ..., Larsson A, Ingelsson E ASHG 2017 Annual Meeting - The American Society of Human Genetics - (-) - 2017-10-17 2017-10-17
Large-scale validation of zebrafish larvae as a model system for genetic screens in dyslipidaemia, atherosclerosis and coronary artery disease Bandaru M, Emmanouilidou A, Ranefall P, ..., Ingelsson E, den Hoed M ASHG 2017 Annual Meeting - The American Society of Human Genetics - (-) - 2017-10-17 2017-10-17
Glycoforest 1.0. Horlacher O, Jin C, Alocci D, ..., Karlsson NG, Lisacek F Anal. Chem. 89 (20) 10932-10940 2017-10-17 2017-09-25
Glioblastoma and glioblastoma stem cells are dependent on functional MTH1. Pudelko L, Rouhi P, Sanjiv K, ..., Helleday T, Bräutigam L Oncotarget 8 (49) 84671-84684 2017-10-17 2017-07-20
Extracellular vesicles from human pancreatic islets suppress human islet amyloid polypeptide amyloid formation. Ribeiro D, Horvath I, Heath N, ..., Forslöw A, Wittung-Stafshede P Proc. Natl. Acad. Sci. U.S.A. 114 (42) 11127-11132 2017-10-17 2017-10-02
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Targeting SAMHD1 with the Vpx protein to improve cytarabine therapy for hematological malignancies. Herold N, Rudd SG, Ljungblad L, ..., Helleday T, Schaller T Nat. Med. 23 (2) 256-263 2017-02-00 2017-01-09
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Novel seminal fluid proteins in the seed beetle Callosobruchus maculatus identified by a proteomic and transcriptomic approach. Bayram H, Sayadi A, Goenaga J, Immonen E, Arnqvist G Insect Mol. Biol. 26 (1) 58-73 2017-02-00 2016-10-24
Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes. Romanov RA, Zeisel A, Bakker J, ..., Horvath TL, Harkany T Nat. Neurosci. 20 (2) 176-188 2017-02-00 2016-12-19
Meta-omic analyses of Baltic Sea cyanobacteria: diversity, community structure and salt acclimation. Celepli N, Sundh J, Ekman M, ..., Bergman B, Ininbergs K Environ. Microbiol. 19 (2) 673-686 2017-02-00 2017-01-27
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Genetic and Targeted eQTL Mapping Reveals Strong Candidate Genes Modulating the Stress Response During Chicken Domestication Fallahsharoudi A, de Kock N, Johnsson M, ..., Wright D, Jensen P G3 (Bethesda) 7 (2) 497-504 2017-02-00 2016-12-14
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Defense Responses in Aspen with Altered Pectin Methylesterase Activity Reveal the Hormonal Inducers of Tyloses Leśniewska J, Öhman D, Krzesłowska M, ..., Moritz T, Mellerowicz EJ Plant Physiol. 173 (2) 1409-1419 2017-02-00 2016-12-06
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A meta-analysis of reflux genome-wide association studies in 6750 Northern Europeans from the general population. Bonfiglio F, Hysi PG, Ek W, ..., Schmidt PT, D'Amato M Neurogastroenterol. Motil. 29 (2) - 2017-02-00 2016-08-04
Towards encoded particles for highly multiplexed colorimetric point of care autoantibody detection. Svedberg G, Jeong Y, Na H, ..., Gantelius J, Svahn HA Lab Chip 17 (3) 549-556 2017-01-31 2017-01-20
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Draft Genome Sequences of Semiconstitutive Red, Dry, and Rough Biofilm-Forming Commensal and Uropathogenic Escherichia coli Isolates. Cimdins A, Lüthje P, Li F, ..., Brauner A, Römling U Genome Announc 5 (4) - 2017-01-26 2017-01-26
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In vitro and in vivo anti-leukemic activity of the peptidase-potentiated alkylator melflufen in acute myeloid leukemia. Strese S, Hassan SB, Velander E, ..., Larsson R, Gullbo J Oncotarget 8 (4) 6341-6352 2017-01-24 2016-12-16
Early onset of inflammation during ontogeny of bipolar disorder: the NLRP2 inflammasome gene distinctly differentiates between patients and healthy controls in the transition between iPS cell and neural stem cell stages Vizlin-Hodzic D, Zhai Q, Illes S, ..., Ågren H, Funa K Transl Psychiatry 7 (1) e1010 2017-01-24 2017-01-24
Vimentin Levels and Serine 71 Phosphorylation in the Control of Cell-Matrix Adhesions, Migration Speed, and Shape of Transformed Human Fibroblasts Terriac E, Coceano G, Mavajian Z, ..., Lautenschläger F, Gad A Cells 6 (1) 2 2017-01-22 2017-01-22
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Proteomic analysis of enterotoxigenic Escherichia coli (ETEC) in neutral and alkaline conditions. Gonzales-Siles L, Karlsson R, Kenny D, Karlsson A, Sjöling Å BMC Microbiol. 17 (1) 11 2017-01-07 2017-01-07
Identification of a Novel Autoimmune Peptide Epitope of Prostein in Prostate Cancer. Pin E, Henjes F, Hong MG, ..., Nilsson P, Schwenk JM J. Proteome Res. 16 (1) 204-216 2017-01-06 2016-10-05
Antibody Validation in Bioimaging Applications Based on Endogenous Expression of Tagged Proteins. Skogs M, Stadler C, Schutten R, ..., Uhlén M, Lundberg E J. Proteome Res. 16 (1) 147-155 2017-01-06 2016-10-12
Single-Cell Analysis Reveals a Close Relationship between Differentiating Dopamine and Subthalamic Nucleus Neuronal Lineages. Kee N, Volakakis N, Kirkeby A, ..., Parmar M, Perlmann T Cell Stem Cell 20 (1) 29-40 2017-01-05 2016-10-27
Proteomic analyses of limbic regions in neonatal male, female and androgen receptor knockout mice. Zettergren A, Karlsson S, Studer E, ..., Sihlbom C, Westberg L BMC Neurosci 18 (1) 9 2017-01-05 2017-01-05
Mapping eQTLs with RNA-seq reveals novel susceptibility genes, non-coding RNAs and alternative-splicing events in systemic lupus erythematosus Odhams CA, Cortini A, Chen L, ..., Vyse TJ, Cunninghame Graham DS Hum. Mol. Genet. - (-) ddw417 2017-01-05 2017-01-05
Imputation-Based Fine-Mapping Suggests That Most QTL in an Outbred Chicken Advanced Intercross Body Weight Line Are Due to Multiple, Linked Loci. Brandt M, Ahsan M, Honaker CF, Siegel PB, Carlborg Ö G3 (Bethesda) 7 (1) 119-128 2017-01-05 2017-01-05
A systematic search strategy identifies cubilin as independent prognostic marker for renal cell carcinoma. Gremel G, Djureinovic D, Niinivirta M, ..., Stewart GD, Pontén F BMC Cancer 17 (1) 9 2017-01-04 2017-01-04
Profile of upregulated inflammatory proteins in sera of Myasthenia Gravis patients. Molin CJ, Westerberg E, Punga AR Sci Rep 7 (1) 39716 2017-01-03 2017-01-03
Small Molecule Microarray Based Discovery of PARP14 Inhibitors Peng B, Thorsell AG, Karlberg T, Schüler H, Yao SQ Angew. Chem. Int. Ed. 56 (1) 248-253 2017-01-02 2016-12-05
Epigenetic changes as prognostic predictors in endometrial carcinomas. Farkas SA, Sorbe BG, Nilsson TK Epigenetics 12 (1) 19-26 2017-01-02 2016-11-23
Comprehensive RNA sequencing of healthy human endometrium at two time points of the menstrual cycle. Sigurgeirsson B, Åmark H, Jemt A, ..., Lundeberg J, Gidlöf S Biol. Reprod. 96 (1) 24-33 2017-01-01 2017-04-11
cis-Cinnamic Acid Is a Novel, Natural Auxin Efflux Inhibitor That Promotes Lateral Root Formation Steenackers W, Klíma P, Quareshy M, ..., Boerjan W, Vanholme B Plant Physiol. 173 (1) 552-565 2017-01-00 2016-11-11
VAV1 regulates experimental autoimmune arthritis and is associated with anti-CCP negative rheumatoid arthritis. Guerreiro-Cacais AO, Norin U, Gyllenberg A, ..., Kockum I, Padyukov L Genes Immun. 18 (1) 48-56 2017-01-00 2017-01-05
SHADE AVOIDANCE 4 Is Required for Proper Auxin Distribution in the Hypocotyl Ge Y, Yan F, Zourelidou M, ..., Schwechheimer C, Tao Y Plant Physiol. 173 (1) 788-800 2017-01-00 2016-11-21
Rye B chromosomes encode a functional Argonaute-like protein with in vitro slicer activities similar to its A chromosome paralog. Ma W, Gabriel TS, Martis MM, ..., Banaei-Moghaddam AM, Houben A New Phytol. 213 (2) 916-928 2017-01-00 2016-07-29
P1.02-063 Mutation Profiling by Targeted Next-Generation Sequencing of an Unselected NSCLC Cohort La Fleur L, Falk-Sorqvist E, Smeds P, ..., Moens L, Botling J Journal of Thoracic Oncology 12 (1) S526-S527 2017-01-00 2017-01-00
Multiethnic genome-wide meta-analysis of ectopic fat depots identifies loci associated with adipocyte development and differentiation. Chu AY, Deng X, Fisher VA, ..., Steinhauser ML, Fox CS Nat. Genet. 49 (1) 125-130 2017-01-00 2016-12-06
Meta-GWAS Accuracy and Power (MetaGAP) Calculator Shows that Hiding Heritability Is Partially Due to Imperfect Genetic Correlations across Studies. de Vlaming R, Okbay A, Rietveld CA, ..., Thurik AR, Koellinger PD PLoS Genet. 13 (1) e1006495 2017-01-00 2017-01-17
Investigating kinship of Neolithic post-LBK human remains from Krusza Zamkowa, Poland using ancient DNA. Juras A, Chyleński M, Krenz-Niedbała M, ..., Jakobsson M, Dabert M Forensic Sci Int Genet 26 (-) 30-39 2017-01-00 2016-10-14
Identification of two distinct mesenchymal stromal cell populations in human malignant glioma. Svensson A, Ramos-Moreno T, Eberstål S, Scheding S, Bengzon J J. Neurooncol. 131 (2) 245-254 2017-01-00 2016-10-18
Human immune system variation. Brodin P, Davis MM Nat. Rev. Immunol. 17 (1) 21-29 2017-01-00 2016-12-05
Genetic and methylation variation in the CYP2B6 gene is related to circulating p,p'-dde levels in a population-based sample. Lind L, Ng E, Ingelsson E, ..., Morris AP, Lind PM Environ Int 98 (-) 212-218 2017-01-00 2016-11-15
Expression of possible targets for new proteasome inhibitors in diffuse large B-cell lymphoma. Delforoush M, Berglund M, Edqvist PH, ..., Gullbo J, Enblad G Eur. J. Haematol. 98 (1) 52-56 2017-01-00 2016-07-12
Expression of Transient Receptor Potential Channels in the Purified Human Pancreatic β-Cells. Marabita F, Islam MS Pancreas 46 (1) 97-101 2017-01-00 2016-07-29
Evolutionary engineering reveals divergent paths when yeast is adapted to different acidic environments. Fletcher E, Feizi A, Bisschops MMM, ..., Siewers V, Nielsen J Metab. Eng. 39 (-) 19-28 2017-01-00 2016-11-02
Epigenetic Patterns in Blood Associated With Lipid Traits Predict Incident Coronary Heart Disease Events and Are Enriched for Results From Genome-Wide Association Studies. Hedman ÅK, Mendelson MM, Marioni RE, ..., Levy D, Ingelsson E Circ Cardiovasc Genet 10 (1) - 2017-01-00 2017-02-19
Emerging microbiota during cold storage and temperature abuse of ready-to-eat salad​ Söderqvist K, Ahmed Osman O, Wolff C, ..., Vågsholm I, Boqvist S Infect Ecol Epidemiol 7 (1) 1328963 2017-01-00 2017-06-06
Elevated levels of circulating CDH5 and FABP1 in association with human drug-induced liver injury. Mikus M, Drobin K, Gry M, ..., Nilsson P, Schuppe-Koistinen I Liver Int. 37 (1) 132-140 2017-01-00 2016-05-26
Deep Fish: Deep Learning–Based Classification of Zebrafish Deformation for High-Throughput Screening Ishaq O, Sadanandan SK, Wählby C SLAS DISCOVERY: Advancing Life Sciences R&D 22 (1) 102-107 2017-01-00 2016-09-26
Contribution of different dispersal sources to the metabolic response of lake bacterioplankton following a salinity change. Comte J, Langenheder S, Berga M, Lindström ES Environ. Microbiol. 19 (1) 251-260 2017-01-00 2016-11-22
Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. Marshall CR, Howrigan DP, Merico D, ..., Sebat J, CNV and Schizophrenia Working Groups of the Psychiatric Genomics Consortium Nat. Genet. 49 (1) 27-35 2017-01-00 2016-11-21
Both maternal and offspring Elovl2 genotypes determine systemic DHA levels in perinatal mice. Pauter AM, Trattner S, Gonzalez-Bengtsson A, ..., Dethlefsen O, Jacobsson A J. Lipid Res. 58 (1) 111-123 2017-01-00 2016-11-20
Association of Body Mass Index with DNA Methylation and Gene Expression in Blood Cells and Relations to Cardiometabolic Disease: A Mendelian Randomization Approach. Mendelson MM, Marioni RE, Joehanes R, ..., Levy D, Deary IJ PLoS Med. 14 (1) e1002215 2017-01-00 2017-01-17
A multi-step peptidolytic cascade for amino acid recovery in chloroplasts. Teixeira PF, Kmiec B, Branca RM, ..., Lehtiö J, Glaser E Nat. Chem. Biol. 13 (1) 15-17 2017-01-00 2016-10-31
A combined large-scale meta-analysis identifies COG6 as a novel shared risk locus for rheumatoid arthritis and systemic lupus erythematosus. Márquez A, Vidal-Bralo L, Rodríguez-Rodríguez L, ..., Alarcón-Riquelme ME, Martín J Ann. Rheum. Dis. 76 (1) 286-294 2017-01-00 2016-05-20
The 15N NMR chemical shift in the characterization of weak halogen bonding in solution Hakkert SB, Gräfenstein J, Erdelyi M Faraday Discuss. 203 (-) 333-346 2017-00-00 2017-00-00
Synthesis of phenanthridine spiropyrans and studies of their effects on G-quadruplex DNA Livendahl M, Jamroskovic J, Hedenström M, ..., Sabouri N, Chorell E Org. Biomol. Chem. 15 (15) 3265-3275 2017-00-00 2017-00-00
Lysozyme's lectin-like characteristics facilitates its immune defense function Zhang R, Wu L, Eckert T, ..., Nifantiev NE, Siebert HC Quart. Rev. Biophys. 50 (-) - 2017-00-00 2017-05-30
Low Rank Enhanced Matrix Recovery of Hybrid Time and Frequency Data in Fast Magnetic Resonance Spectroscopy Lu H, Zhang X, Qiu T, ..., Chen Z, Qu X IEEE Trans. Biomed. Eng. - (-) 1-1 2017-00-00 2017-00-00
Favored surface-limited oxidation of cellulose with Oxone® in water Ruan CQ, Strømme M, Mihranyan A, Lindh J RSC Adv. 7 (64) 40600-40607 2017-00-00 2017-00-00
Differential Neuroprotective Effects of Interleukin-1 Receptor Antagonist on Spinal Cord Neurons after Excitotoxic Injury Schizas N, Perry S, Andersson B, ..., Kullander K, Hailer NP Neuroimmunomodulation 24 (4-5) 220-230 2017-00-00 2018-01-26
Decoding Gene Expression in 2D and 3D Bombrun M, Ranefall P, Lindblad J, ..., Nilsson M, Wählby C Scandinavian Conference on Image Analysis 2017 - (-) 257-268 2017-00-00 2017-05-19
Achieving enhanced ionic mobility in nanoporous silica by controlled surface interactions Garaga MN, Aguilera L, Yaghini N, ..., Persson M, Martinelli A Phys. Chem. Chem. Phys. 19 (8) 5727-5736 2017-00-00 2017-00-00
A Fast Low Rank Hankel Matrix Factorization Reconstruction Method for Non-Uniformly Sampled Magnetic Resonance Spectroscopy Guo D, Lu H, Qu X IEEE Access 5 (-) 16033-16039 2017-00-00 2017-00-00
124 CHANGES IN GENE EXPRESSION FOLLOWING EXPOSURE OF BOVINE ENDOMETRIAL EPITHELIAL CELLS (bEEC) TO ESCHERICHIA COLI LPS; THEIR POSSIBLE EFFECT ON IMPLANTATION Guo Y, Jahmat N, Van Shaik T, ..., Andersson G, Humblot P Reprod. Fertil. Dev. 29 (1) 170 2017-00-00 2017-00-00

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