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2024 (245)
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2018 (651)
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2015 (429)
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NGI Spatial omics
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Secondary
: Not shown in the list of current labels.
Started:
-
Ended:
Current
Year 2024
PubMed
DOI
Crossref
Origin, structure, and composition of the spider major ampullate silk fiber revealed by genomics, proteomics, and single-cell and spatial transcriptomics.
Sonavane S
, Hassan S,
Chatterjee U
, ...,
Reimegård J
,
Rising A
Sci Adv
10
(33) eadn0597 [2024-08-16; online 2024-08-14]
Bioinformatics Long-term Support WABI [Collaborative]
Bioinformatics Support, Infrastructure and Training [Collaborative]
NGI Short read [Service]
NGI Spatial omics [Collaborative]
NGI Stockholm (Genomics Applications) [Collaborative]
NGI Stockholm (Genomics Production) [Service]
NGI Uppsala (Uppsala Genome Center) [Collaborative]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Spatial Transcriptomics in a Case of Follicular Thyroid Carcinoma Reveals Clone-Specific Dysregulation of Genes Regulating Extracellular Matrix in the Invading Front.
Condello V
,
Paulsson JO
,
Zedenius J
,
Näsman A
,
Juhlin CC
Endocr. Pathol.
-
(-) - [2024-01-27; online 2024-01-27]
NGI Short read [Service]
NGI Spatial omics [Service]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
Year 2023
PubMed
DOI
Crossref
Solid-phase capture and profiling of open chromatin by spatial ATAC.
Llorens-Bobadilla E
,
Zamboni M
,
Marklund M
, ..., Frisén J,
Ståhl PL
Nat. Biotechnol.
41
(8) 1085-1088 [2023-08-00; online 2023-01-05]
Bioinformatics Support for Computational Resources [Service]
NGI Short read [Service]
NGI Spatial omics
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
The spatial landscape of gene expression isoforms in tissue sections.
Lebrigand K
,
Bergenstråhle J
,
Thrane K
, ...,
Waldmann R
,
Lundeberg J
Nucleic Acids Res.
51
(8) e47 [2023-05-08; online 2023-03-18]
NGI Short read [Service]
NGI Spatial omics
NGI Stockholm (Genomics Applications) [Collaborative]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin.
Li X
, Andrusivova Z,
Czarnewski P
, ...,
Lundeberg J
,
Sundström E
Nat. Neurosci.
26
(5) 891-901 [2023-05-00; online 2023-04-24]
BioImage Informatics [Collaborative]
Bioinformatics Support for Computational Resources [Service]
In Situ Sequencing (ISS) [Collaborative]
NGI Short read [Service]
NGI Spatial omics [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
Year 2022
PubMed
DOI
Crossref
Spatio-temporal analysis of prostate tumors in situ suggests pre-existence of treatment-resistant clones.
Marklund M
, Schultz N,
Friedrich S
, ...,
Sonnhammer E
,
Lundeberg J
Nat Commun
13
(1) 5475 [2022-09-17; online 2022-09-17]
NGI Short read [Service]
NGI Spatial omics
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Spatially resolved clonal copy number alterations in benign and malignant tissue.
Erickson A,
He M
, Berglund E, ..., Lamb AD,
Lundeberg J
Nature
608
(7922) 360-367 [2022-08-00; online 2022-08-10]
NGI Short read [Service]
NGI Spatial omics [Service]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics.
Ratz M
,
von Berlin L
,
Larsson L
, ...,
Lundeberg J
,
Frisén J
Nat. Neurosci.
25
(3) 285-294 [2022-03-00; online 2022-02-24]
Bioinformatics Long-term Support WABI [Collaborative]
Bioinformatics Support for Computational Resources [Service]
Bioinformatics Support, Infrastructure and Training [Collaborative]
NGI Short read [Service]
NGI Single cell [Service]
NGI Spatial omics [Service]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
Three-dimensional spatial transcriptomics uncovers cell type localizations in the human rheumatoid arthritis synovium.
Vickovic S
,
Schapiro D
,
Carlberg K
, ...,
Regev A
,
Ståhl PL
Commun Biol
5
(1) 129 [2022-02-11; online 2022-02-11]
NGI Short read [Service]
NGI Spatial omics [Service]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
PubMed
DOI
Crossref
The spatial transcriptomic landscape of the healing mouse intestine following damage.
Parigi SM,
Larsson L
, Das S, ...,
Lundeberg J
,
Villablanca EJ
Nat Commun
13
(1) 828 [2022-02-11; online 2022-02-11]
NGI Short read [Service]
NGI Spatial omics [Service]
NGI Stockholm (Genomics Applications) [Service]
NGI Stockholm (Genomics Production) [Service]
National Genomics Infrastructure [Service]
Year 2021
PubMed
DOI
Crossref
Genome-wide spatial expression profiling in formalin-fixed tissues.
Gracia Villacampa E
, Larsson L, Mirzazadeh R, ...,
Carlson J
,
Lundeberg J
Cell Genomics
1
(3) 100065 [2021-12-08; online 2021-12-08]
NGI Short read [Service]
NGI Spatial omics [Service]
National Genomics Infrastructure [Service]
SciLifeLab Data Centre
Publications
9.5.0