NGI Uppsala (Uppsala Genome Center)

SciLifeLab National facility since 2013.

483 publications

Year 2020

Fungi and Oomycetes in the Irrigation Water of Forest Nurseries
Marčiulynas A, Marčiulynienė D, Lynikienė J, ..., Vaičiukynė M, Menkis A
Forests 11 (4) 459 [2020-04-18; online 2020-04-18]
NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

Year 2019

Fam83F induces p53 stabilisation and promotes its activity.
Salama M, Benitez-Riquelme D, Elabd S, ..., Davidson G, Blattner C
pii: 10.1038/s41418-019-0281-1 pmc: PMC6748130
Cell Death Differ. 26 (10) 2125-2138 [2019-10-00; online 2019-01-28]
NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
The TGFB2-AS1 lncRNA Regulates TGF-β Signaling by Modulating Corepressor Activity.
Papoutsoglou P, Tsubakihara Y, Caja L, ..., Heldin CH, Moustakas A
pii: S2211-1247(19)31062-9
Cell Rep 28 (12) 3182-3198.e11 [2019-09-17; online 2019-09-19]
NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

Year 2018

Sharing of photobionts in sympatric populations of Thamnolia and Cetraria lichens: evidence from high-throughput sequencing
Onuț-Brännström I, Benjamin M, Scofield DG, ..., Lindström ES, Johannesson H
ENA: ERR2307093 ENA: ERR2307094 ENA: ERR2307095 ENA: ERR2307096 ENA: ERR2307097 ENA: ERR2307098 GENBANK: MG372066
Sci Rep 8 (1) - [2018-12-00; online 2018-03-13]
Bioinformatics Compute and Storage [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]

Year 2017

Year 2016

Year 2015

Mutation in CEP63 co-segregating with developmental dyslexia in a Swedish family.
Einarsdottir E, Svensson I, Darki F, ..., Kere J, Matsson H
pii: 10.1007/s00439-015-1602-1 pmc: PMC4628622
Hum. Genet. 134 (11-12) 1239-1248 [2015-11-00; online 2015-09-25]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
CGGBP1 mitigates cytosine methylation at repetitive DNA sequences.
Agarwal P, Collier P, Fritz MH, ..., Westermark B, Singh U
pii: 10.1186/s12864-015-1593-2 pmc: PMC4432828
BMC Genomics 16 (-) 390 [2015-05-16; online 2015-05-16]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
Fluctuating expression of microRNAs in adenovirus infected cells.
Zhao H, Chen M, Tellgren-Roth C, Pettersson U
pii: S0042-6822(15)00056-2
Virology 478 (-) 99-111 [2015-04-00; online 2015-03-07]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
Methylation levels of SLC23A2 and NCOR2 genes correlate with spinal muscular atrophy severity.
Zheleznyakova GY, Nilsson EK, Kiselev AV, ..., Baranov VS, Schiöth HB
pii: PONE-D-14-49427 pmc: PMC4378931
PLoS ONE 10 (3) e0121964 [2015-03-30; online 2015-03-30]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
Complete genome sequence of Borrelia afzelii K78 and comparative genome analysis.
Schüler W, Bunikis I, Weber-Lehman J, ..., Bergström S, Lundberg U
pii: PONE-D-14-47099 pmc: PMC4370689
PLoS ONE 10 (3) e0120548 [2015-03-23; online 2015-03-23]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure

Year 2014

Serotonin receptor gene (5HT-2A) polymorphism is associated with provoked vestibulodynia and comorbid symptoms of pain.
Heddini U, Bohm-Starke N, Grönbladh A, ..., Nilsson KW, Johannesson U
pii: S1743-6095(15)30634-2
J Sex Med 11 (12) 3064-3071 [2014-12-00; online 2014-09-02]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
Sexual structures and recombination of the wheat rust fungus Puccinia striiformis on Berberis vulgaris.
Rodriguez-Algaba J, Walter S, Sørensen CK, Hovmøller MS, Justesen AF
pii: S1087-1845(14)00120-0
Fungal Genet. Biol. 70 (-) 77-85 [2014-09-00; online 2014-07-22]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
Splicing in the human brain.
Zaghlool A, Ameur A, Cavelier L, Feuk L
pii: B978-0-12-801105-8.00005-9
Int. Rev. Neurobiol. 116 (-) 95-125 [2014-08-31; online 2014-08-31]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
Nucleosome regulatory dynamics in response to TGFβ.
Enroth S, Andersson R, Bysani M, ..., Komorowski J, Wadelius C
pii: gku326 pmc: PMC4066760
Nucleic Acids Res. 42 (11) 6921-6934 [2014-06-00; online 2014-04-29]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure

Year 2013

New viruses in veterinary medicine, detected by metagenomic approaches.
Belák S, Karlsson OE, Blomström AL, Berg M, Granberg F
pii: S0378-1135(13)00074-6
Vet. Microbiol. 165 (1-2) 95-101 [2013-07-26; online 2013-02-23]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
The genomic signature of dog domestication reveals adaptation to a starch-rich diet.
Axelsson E, Ratnakumar A, Arendt M, ..., Hedhammar A, Lindblad-Toh K
pii: nature11837
Nature 495 (7441) 360-364 [2013-03-21; online 2013-01-29]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure

Year 2012

Reclassification of the Candida haemulonii complex as Candida haemulonii (C. haemulonii group I), C. duobushaemulonii sp. nov. (C. haemulonii group II), and C. haemulonii var. vulnera var. nov.: three multiresistant human pathogenic yeasts.
Cendejas-Bueno E, Kolecka A, Alastruey-Izquierdo A, ..., Gómez-López A, Boekhout T
pii: JCM.02248-12 pmc: PMC3486233 GENBANK: JX459660 GENBANK: JX459661 GENBANK: JX459662 GENBANK: JX459663 GENBANK: JX459664 GENBANK: JX459665 GENBANK: JX459666 GENBANK: JX459667 GENBANK: JX459668 GENBANK: JX459669 GENBANK: JX459670 GENBANK: JX459671 GENBANK: JX459672 GENBANK: JX459673 GENBANK: JX459674 GENBANK: JX459675 GENBANK: JX459676 GENBANK: JX459677 GENBANK: JX459678 GENBANK: JX459679 GENBANK: JX459680 GENBANK: JX459681 GENBANK: JX459682 GENBANK: JX459683 GENBANK: JX459684 GENBANK: JX459685 GENBANK: JX459686 GENBANK: JX459687 GENBANK: JX459688 GENBANK: JX459689 GENBANK: JX459690 GENBANK: JX459691 GENBANK: JX459692 GENBANK: JX459693 GENBANK: JX459694 GENBANK: JX459695 GENBANK: JX459696 GENBANK: JX459697 GENBANK: JX459698 GENBANK: JX459699 GENBANK: JX459700 GENBANK: JX459701 GENBANK: JX459702 GENBANK: JX459703 GENBANK: JX459704 GENBANK: JX459705 GENBANK: JX459706 GENBANK: JX459707 GENBANK: JX459708 GENBANK: JX459709 GENBANK: JX459710 GENBANK: JX459711 GENBANK: JX459712 GENBANK: JX459713 GENBANK: JX459714 GENBANK: JX459715 GENBANK: JX459716 GENBANK: JX459717 GENBANK: JX459718 GENBANK: JX459719 GENBANK: JX459720 GENBANK: JX459721 GENBANK: JX459722 GENBANK: JX459723 GENBANK: JX459724 GENBANK: JX459725 GENBANK: JX459726 GENBANK: JX459727 GENBANK: JX459728 GENBANK: JX459729 GENBANK: JX459730 GENBANK: JX459731 GENBANK: JX459732 GENBANK: JX459733 GENBANK: JX459734 GENBANK: JX459735 GENBANK: JX459736 GENBANK: JX459737 GENBANK: JX459738 GENBANK: JX459739 GENBANK: JX459740 GENBANK: JX459741 GENBANK: JX459742 GENBANK: JX459743 GENBANK: JX459744 GENBANK: JX459745 GENBANK: JX459746 GENBANK: JX459747 GENBANK: JX459748 GENBANK: JX459749 GENBANK: JX459750 GENBANK: JX459751 GENBANK: JX459752 GENBANK: JX459753 GENBANK: JX459754 GENBANK: JX459755 GENBANK: JX459756 GENBANK: JX459757 GENBANK: JX459758 GENBANK: JX459759 GENBANK: JX459760 GENBANK: JX459761 GENBANK: JX459762 GENBANK: JX459763 GENBANK: JX459764 GENBANK: JX459765 GENBANK: JX459766 GENBANK: JX459767 GENBANK: JX459768 GENBANK: JX459769 GENBANK: JX459770 GENBANK: JX459771 GENBANK: JX459772 GENBANK: JX459773 GENBANK: JX459774 GENBANK: JX459775 GENBANK: JX459776 GENBANK: JX459777 GENBANK: JX459778 GENBANK: JX459779 GENBANK: JX459780 GENBANK: JX459781 GENBANK: JX459782 GENBANK: JX459783 GENBANK: JX459784 GENBANK: JX459785 GENBANK: JX459786 GENBANK: JX459787 GENBANK: JX459788 GENBANK: JX459789 GENBANK: JX459790 GENBANK: JX459791 GENBANK: JX459792
J. Clin. Microbiol. 50 (11) 3641-3651 [2012-11-00; online 2012-09-07]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
GCH1-polymorphism and pain sensitivity among women with provoked vestibulodynia.
Heddini U, Bohm-Starke N, Grönbladh A, ..., Nilsson KW, Johannesson U
pii: 1744-8069-8-68 pmc: PMC3489821
Mol Pain 8 (-) 68 [2012-09-12; online 2012-09-12]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure
Unraveling assembly of stream biofilm communities.
Besemer K, Peter H, Logue JB, ..., Tranvik LJ, Battin TJ
pii: ismej2011205 pmc: PMC3400417
ISME J 6 (8) 1459-1468 [2012-08-00; online 2012-01-13]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure

Year 2011

Variants in STAT5B associate with serum TC and LDL-C levels.
Kornfeld JW, Isaacs A, Vitart V, ..., Pramstaller PP, Hicks AA
pii: jc.2011-0322
J. Clin. Endocrinol. Metab. 96 (9) E1496-E1501 [2011-09-00; online 2011-07-15]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure

Year 2010

Different SNP combinations in the GCH1 gene and use of labor analgesia.
Dabo F, Grönbladh A, Nyberg F, Sundström-Poromaa I, Akerud H
pii: 1744-8069-6-41 pmc: PMC2912270
Mol Pain 6 (-) 41 [2010-07-15; online 2010-07-15]
NGI Uppsala (Uppsala Genome Center) National Genomics Infrastructure