Publications 2025

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413 publications

DOI Crossref
Tree retention levels and prescribed burning effects on ectomycorrhizal fungal communities in a boreal Scots pine forest
Lariviere D, Djupström L, Lindahl BD, Dahlberg A
Forest Ecology and Management 598 (-) 123186 [2025-12-00; online 2025-12-00]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Detailed analysis of fungal communities in Norway spruce logs reveals stochastic fine-scale patterns of species and detects lichen forming fungi without their photobionts
Dahlberg A, Pioli S, Jönsson M, ..., Thor G, Nogerius VT
Fungal Ecology 78 (-) 101458 [2025-12-00; online 2025-12-00]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Changes in silver birch biochemical profiles and leaf-associated fungi across genetic markers induced by seed treatment with DBD plasma
Čėsnienė I, Čėsna V, Mildažienė V, ..., Shiratani M, Sirgedaitė-Šėžienė V
Plant Stress 18 (-) 101077 [2025-12-00; online 2025-12-00]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Comparative evaluation of Olink Explore 3072 and mass spectrometry with peptide fractionation for plasma proteomics.
Sissala N, Babačić H, Leo IR, ..., Åberg M, Pernemalm M
Commun Chem 8 (1) 327 [2025-11-04; online 2025-11-04]
Affinity Proteomics Stockholm [Collaborative] NGI Proteomics [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Studying macromolecular composition in cell-cell interfaces using 3D membrane reconstitution systems
Ragaller F, Schneider AM, Sjule E, ..., Achour A, Sezgin E
- - (-) - [2025-11-02; online 2025-11-02]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Cryo-EM exposes diverse polymorphism in IAPP mutants to guide the rational design of peptide-based therapeutics.
Ooi SA, Valli D, Kuska MI, ..., Servitja JM, Maj M
J. Mol. Biol. 437 (21) 169405 [2025-11-01; online 2025-08-22]
Integrated Microscopy Technologies Gothenburg [Service]
DOI Crossref
Paleogenomic evidence on the temporal continuity of indigenous goat exploitation in the Canary Islands
Díaz-Pérez C, Santana J, Daly KG, ..., Arnay M, Fregel R
iScience 28 (11) 113771 [2025-11-00; online 2025-11-00]
Ancient DNA [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Growth failure in aggrecan deficiency is due to decreased extracellular matrix and impaired growth plate chondrocyte hypertrophy.
Bendre A, Ottosson L, Baroncelli M, Dou Z, Nilsson O
Bone 200 (-) 117594 [2025-11-00; online 2025-07-18]
Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service]
PubMed DOI Crossref
Genetic Analysis of Apple Autumn Canopy Senescence in a Nordic Climate.
Skytte Af Sätra J
Physiol Plantarum 177 (6) e70599 [2025-10-30; online 2025-10-30]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Persistence-Directed Testing of Chemicals Discharged from Offshore Oil Platforms Combined with Nontargeted Analysis.
Møller MT, Birch H, Sjøholm KK, ..., Martin JW, Mayer P
Environ. Sci. Technol. - (-) - [2025-10-29; online 2025-10-29]
Exposomics [Collaborative]
PubMed DOI Crossref
Epigenetic mediation may explain intergenerational associations between maternal obesogenic lifestyle and children's birth weight: findings from the NorthPop prospective birth cohort.
De Silva K, Lundberg-Ulfsdotter R, Bodén S, ..., Domellöf M, Harlid S
Clin Epigenetics 17 (1) 180 [2025-10-29; online 2025-10-29]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Altered DNA Methylation Pattern Contributes to Differential Epigenetic Immune Signaling in the Upper Respiratory Airway of Unvaccinated COVID-19 Patients
Govender M, Das J, Hopkins FR, ..., Nyström S, Larsson M
Cells 14 (21) 1673 [2025-10-27; online 2025-10-27]
Clinical Genomics [Service] Clinical Genomics Linköping [Collaborative]
PubMed DOI Crossref
Autoreactive T cells identified in patients with anti-Jo1+ antisynthetase syndrome recognise a new epitope on histidyl t-RNA synthetase.
Galindo-Feria AS, Sharma RK, Dubnovitsky A, ..., Lundberg IE, Horuluoglu B
Ann. Rheum. Dis. - (-) - [2025-10-25; online 2025-10-25]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Diagnostic and prognostic biomarkers associated with histotype in advanced epithelial ovarian cancer.
Ittner E, Swenson H, Werner L, ..., Parris TZ, Helou K
Sci Rep 15 (1) 37171 [2025-10-23; online 2025-10-23]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Transcriptomic responses of beet to infection by beet mild yellowing virus.
Puthanveed V, Sajeevan RS, Siddique AB, ..., Lennefors BL, Kvarnheden A
BMC Plant Biol. 25 (1) 1406 [2025-10-21; online 2025-10-21]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Symbiont Diversity of Rice-Associated Leafhoppers (Cicadellidae) in the Tropical Floodplains of the Tonle Sap Lake, Cambodia.
Phauk S, Assentato L, Sin S, ..., Hap S, Terenius O
Microb. Ecol. 88 (1) 109 [2025-10-17; online 2025-10-17]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Prodan-based solvatochromic probes for polarity imaging of organelles
Aknine N, Holban P, Ragaller F, ..., Sezgin E, Klymchenko AS
- - (-) - [2025-10-17; online 2025-10-17]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Reduced vascular leakage correlates with breast carcinoma T regulatory cell infiltration but not with metastatic propensity.
He L, Testini C, Hekmati N, ..., Strell C, Welsh M
Mol Oncol - (-) - [2025-10-16; online 2025-10-16]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Evaluating cell-specific gene expression using single-cell and single-nuclei RNA-sequencing data from human pancreatic islets of the same donors.
Engström K, Nilsson Å, Ofori JK, ..., Bacos K, Ling C
Sci Rep 15 (1) 36133 [2025-10-16; online 2025-10-16]
Clinical Genomics Lund [Service]
PubMed DOI Crossref
Epigenetic alterations facilitate transcriptional and translational programs in hypoxia.
Watt K, Dauber B, Szkop KJ, ..., Larsson O, Postovit LM
Nat Cell Biol - (-) - [2025-10-16; online 2025-10-16]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Association of estrogen receptor single nucleotide polymorphisms and perinatal depression.
Björvang RD, Gumbo LF, Årdahl A, ..., Fransson E, Skalkidou A
PLoS ONE 20 (10) e0334705 [2025-10-16; online 2025-10-16]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Structure of the central Staphylococcus aureus AAA+ protease MecA/ClpC/ClpP.
Azinas S, Wallden K, Katikaridis P, ..., Mogk A, Carroni M
Commun Biol 8 (1) 1467 [2025-10-14; online 2025-10-14]
Cryo-EM [Collaborative]
PubMed DOI Crossref
T2T-CHM13 improves read mapping and detection of clinically relevant genetic variation in the Swedish population.
Schmitz D, Ameur A, Johansson Å
Genome Res. - (-) - [2025-10-10; online 2025-10-10]
NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
DOI Crossref
Dual-color expansion microscopy of membrane proteins using bioorthogonal labelling
Edwards S, Meineke B, Bauer S, ..., Elsässer S, Brismar H
- - (-) - [2025-10-10; online 2025-10-10]
Integrated Microscopy Technologies Stockholm [Technology development]
PubMed DOI Crossref
A human pan-disease blood atlas of the circulating proteome.
Álvez MB, Bergström S, Kenrick J, ..., Edfors F, Uhlén M
Science - (-) eadx2678 [2025-10-09; online 2025-10-09]
Affinity Proteomics Uppsala [Collaborative] Autoimmunity and Serology Profiling [Service] NGI Proteomics [Collaborative] NGI Uppsala (SNP&SEQ Technology Platform) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
The genomic landscape of relapsed infant and childhood KMT2A-rearranged acute leukemia.
Ahlgren L, Pilheden M, Sturesson H, ..., Ma J, Hagström-Andersson AK
Nat Commun 16 (1) 8964 [2025-10-08; online 2025-10-08]
Clinical Genomics [Service] Clinical Genomics Lund [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
LINE-1 retrotransposons mediate cis-acting transcriptional control in human pluripotent stem cells and regulate early brain development.
Adami A, Garza R, Gerdes P, ..., Douse CH, Jakobsson J
Cell Genomics 5 (10) 100979 [2025-10-08; online 2025-08-22]
Clinical Genomics Lund [Service] NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Estimating allele frequencies, ancestry proportions and genotype likelihoods in the presence of mapping bias
Günther T, Goldberg A, Schraiber JG
G3 (Bethesda) 15 (10) - [2025-10-08; online 2025-07-30]
Ancient DNA [Collaborative]
DOI Crossref
Climate-driven deoxygenation promoted potential mercury methylators in the past Black Sea water column
Zhong M, Barrenechea Angeles I, More KD, ..., Coolen MJL, Capo E
Nat Water - (-) - [2025-10-08; online 2025-10-08]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Associations of the intestinal microbiota with plasma bile acids and inflammation markers in Crohn's disease and ulcerative colitis.
Prast-Nielsen S, Granström AL, Kiasat A, ..., Gustafsson UO, Engstrand L
Sci Rep 15 (1) 35039 [2025-10-08; online 2025-10-08]
Affinity Proteomics Stockholm [Service]
DOI Crossref
Spatial mapping of DNA synthesis reveals dynamics and geometry of human replication nanostructures
Hawgood M, Urién B, Agostinho A, ..., Blom H, Lemmens B
EMBO J. - (-) - [2025-10-07; online 2025-10-07]
Integrated Microscopy Technologies Stockholm [Collaborative]
PubMed DOI Crossref
Reliable on-treatment prognostication and target identification with a customized assay for circulating tumor DNA in patients with newly diagnosed pancreatic cancer.
Petersson A, Svensson M, Hau SO, ..., Gisselsson D, Jirström K
Sci Rep 15 (1) 34481 [2025-10-03; online 2025-10-03]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Clinical Genomics Lund [Service]
PubMed DOI Crossref
Proteomic analysis of nemaline myopathy in infants reveals distinct common dysregulated proteins and cellular pathways.
Hedberg-Oldfors C, Bedir AZ, Visuttijai K, Michael E, Oldfors A
Front Neurol 16 (-) 1661747 [2025-10-03; online 2025-10-03]
Glycoproteomics and MS Proteomics [Service]
PubMed DOI Crossref
Correlation of autoantibody profiles with clinical parameters in exfoliative glaucoma patients.
Potter R, Ayala M, Tilevik A
Int Ophthalmol 45 (1) 404 [2025-10-03; online 2025-10-03]
Autoimmunity and Serology Profiling [Service]
PubMed DOI Crossref
Aberrant expression of SLAMF6 constitutes a targetable immune escape mechanism in acute myeloid leukemia.
Sandén C, Landberg N, Peña-Martínez P, ..., Ågerstam H, Fioretos T
Nat Cancer - (-) - [2025-10-03; online 2025-10-03]
Clinical Genomics Lund [Service]
PubMed DOI Crossref
Role of GDH and PARP inhibitors as novel treatments for SDHB-deficient PPGLs.
Tabebi M, Abdallah S, El-Serafi A, Söderkvist P, Gimm O
Endocr. Relat. Cancer 32 (10) - [2025-10-01; online 2025-10-08]
Clinical Genomics [Collaborative] Clinical Genomics Linköping [Collaborative]
PubMed DOI Crossref
Chromosome-level assembly of the club-legged grasshopper (Gomphocerus sibiricus) genome.
Palacios-Gimenez OM, Varma M, Cheng X, ..., Suh A, Schielzeth H
G3 (Bethesda) - (-) - [2025-10-01; online 2025-10-01]
NGI Long read [Collaborative] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Sleep health associations with serum metabolites in healthy adults.
Sørensen C, Dudka I, Virel A, ..., Kalpouzos G, Sindi S
Brain Behav Immun Health 48 (-) 101050 [2025-10-00; online 2025-07-04]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Progenitor exhausted PD-1+ T cells are cellular targets of immune checkpoint inhibition in atherosclerosis.
Mulholland M, Chalou A, Andersson SHA, ..., Gisterå A, Engelbertsen D
Nat Cardiovasc Res 4 (10) 1311-1328 [2025-10-00; online 2025-10-07]
Clinical Genomics [Service] Clinical Genomics Lund [Service]
PubMed DOI Crossref
Primary and Secondary Symbionts of Cambodian Cicadellidae and the Role of Parasitisation.
Phauk S, Assentato L, Meas S, Terenius O
Environ Microbiol Rep 17 (5) e70196 [2025-10-00; online 2025-09-17]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Morphology and molecular mobility of plasticized lignins studied with polarization transfer solid-state NMR and SAXS
Henrik-Klemens Å, Sparrman T, Björn L, Matic A, Larsson A
Polymer Testing 151 (-) 108942 [2025-10-00; online 2025-10-00]
Swedish NMR Centre [Collaborative]
DOI Crossref
Metaaltijden (vol. 12). Bijdragen in de studie van de metaaltijden: The role of elk (Alces alces) in the Dutch Bronze Age
Brusgaard N, Aal J, van Dijk J
- - (-) - [2025-10-00; online 2025-10-00]
Ancient DNA [Service]
PubMed DOI Crossref
Frequent longitudinal blood microsampling and proteome monitoring identify disease markers and enable timely intervention in a mouse model of type 1 diabetes.
Parajuli A, Bendes A, Byvald F, ..., Schwenk JM, Flodström-Tullberg M
Diabetologia 68 (10) 2277-2289 [2025-10-00; online 2025-08-04]
Affinity Proteomics Stockholm [Service]
DOI Crossref
Effects of rainfall exclusion on soil fungi in a boreal forest landscape
Koelemeijer IA, Castaño C, Clemmensen KE, ..., Jönsson M, Hylander K
Fungal Ecology 77 (-) 101452 [2025-10-00; online 2025-10-00]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Allosteric control of the bacterial ClpC/ClpP protease and its hijacking by antibacterial peptides.
Jenne T, Engelhardt L, Baronaite I, ..., Carroni M, Mogk A
EMBO J. - (-) - [2025-09-29; online 2025-09-29]
Cryo-EM [Service]
PubMed DOI Crossref
Patients with systemic lupus erythematosus (SLE) have an increased bisphenol A methylation score linked to SLE risk genes and selected clinical subphenotypes.
Vestin H, Oparina N, Eloranta ML, ..., Imgenberg-Kreuz J, Leonard D
RMD Open 11 (3) - [2025-09-25; online 2025-09-25]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Apoptotic bodies in phytoplankton suggest evolutionary conservation of cell death mechanisms.
Corredor L, Vergou GA, Skalický V, ..., Gorzsás A, Funk C
Nat Commun 16 (1) 8427 [2025-09-25; online 2025-09-25]
Cryo-EM [Service] Integrated Microscopy Technologies Umeå [Service]
PubMed DOI Crossref
Major Histocompatibility Complex modulation of Batrachochytrium dendrobatidis and Ranavirus infections in amphibians.
Cortazar-Chinarro M, Richter-Boix A, Halvarsson P, Palomar G, Bosch J
J. Evol. Biol. - (-) - [2025-09-24; online 2025-09-24]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Corrigendum to "In vitro study of cold atmospheric plasma-induced proliferation inhibition and morphological changes in head and neck carcinoma cell lines" [Journal of Dentistry161 (2025) 106007].
Maravic T, Petrucci G, di Giacomo V, ..., Breschi L, Perrotti V
J Dent - (-) 106098 [2025-09-24; online 2025-09-24]
Integrated Microscopy Technologies Gothenburg [Technology development]
PubMed DOI Crossref
Tertiary lymphoid structures in Merkel cell carcinoma facilitate naïve and central memory T-cell infiltration linked to immunotherapy response.
Srinivas N, Spassova I, Lei KC, ..., Lui WO, Becker JC
J Immunother Cancer 13 (9) - [2025-09-23; online 2025-09-23]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Influence of the pre-membrane and envelope proteins on structure, pathogenicity, and tropism of tick-borne encephalitis virus.
Rosendal E, Bisikalo K, Willekens SMA, ..., Nilsson E, Överby AK
J. Virol. 99 (9) e0087025 [2025-09-23; online 2025-08-19]
Glycoproteomics and MS Proteomics [Collaborative]
PubMed DOI Crossref
FET fusion oncoproteins enrich SWI/SNF complex subtypes and interaction partners.
Lindén M, Andersson L, Albatrok H, ..., Åman P, Ståhlberg A
Cell Mol Biol Lett 30 (1) 107 [2025-09-23; online 2025-09-23]
Glycoproteomics and MS Proteomics [Service]
PubMed DOI Crossref
SAG1.3-derived Frizzled-targeting small molecule compounds.
Grätz L, Turku A, Kozielewicz P, ..., Gmeiner P, Schulte G
J. Biol. Chem. - (-) 110751 [2025-09-22; online 2025-09-22]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Unveiling histotype-specific biomarkers in ovarian carcinoma using proteomics.
Werner L, Ittner E, Swenson H, ..., Parris TZ, Helou K
Mol Ther Oncol 33 (3) 201019 [2025-09-18; online 2025-07-16]
Glycoproteomics and MS Proteomics [Collaborative]
PubMed DOI Crossref
Low-Dose Aspirin for PI3K-Altered Localized Colorectal Cancer.
Martling A, Hed Myrberg I, Nilbert M, ..., Lindberg J, ALASCCA Study Group
N. Engl. J. Med. 393 (11) 1051-1064 [2025-09-18; online 2025-09-17]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Targeted ferroptosis induction enhances chemotherapy efficacy in chemoresistant neuroblastoma.
Mañas A, Seger A, Adamska A, ..., Aaltonen K, Bexell D
NPJ Precis Oncol 9 (1) 311 [2025-09-16; online 2025-09-16]
Clinical Genomics Lund [Service]
PubMed DOI Crossref
Protocol for genomic surveillance of Plasmodium falciparum antigens using amplicon-based PacBio long-read sequencing.
Plaza DF
STAR Protoc 6 (4) 104093 [2025-09-15; online 2025-09-15]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Insights into the Metabolic Adaptations of a Carbapenem-Resistant Klebsiella pneumoniae Strain on Exposure to Sublethal Concentrations of Ertapenem.
Jaén-Luchoro D, Salvà-Serra F, Piñeiro-Iglesias B, ..., Moore ERB, Karlsson R
Int J Mol Sci 26 (18) - [2025-09-15; online 2025-09-15]
Glycoproteomics and MS Proteomics [Service]
PubMed DOI Crossref
Temporal control of human DNA replication licensing by CDK4/6-RB signalling and chemical genetics.
Sosenko Piscitello A, Nilsson AS, Hawgood M, ..., Halazonetis TD, Lemmens B
Nat Commun 16 (1) 8268 [2025-09-12; online 2025-09-12]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Genome sequences of six clinical isolates of Candida parapsilosis exhibiting different degrees and temporal regulation of biofilm formation.
Shafeeq S, Pannanusorn S, Dainat J, ..., Nystedt B, Römling U
Microbiol Resour Announc 14 (9) e0130024 [2025-09-11; online 2025-08-11]
NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Personality and repeated social defeat affect health condition and gene expression in the skin and intestines in zebrafish.
Benrejdal L, Hubená P, Brodin D, ..., Winberg S, Bergman P
Prog. Neuropsychopharmacol. Biol. Psychiatry - (-) 111487 [2025-09-09; online 2025-09-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Immunogenicity and innate immunity to high-dose and repeated vaccination of modified mRNA versus unmodified mRNA.
Engstrand O, Joas G, Miranda MC, ..., Reinhardt A, Loré K
Mol Ther Nucleic Acids 36 (3) 102588 [2025-09-09; online 2025-06-09]
Affinity Proteomics Stockholm [Service]
PubMed DOI Crossref
Mass Spectrometry-Based Analysis of Surface Proteins in Staphylococcus aureus Clinical Strains: Identification of Promising k-mer Targets for Diagnostics.
Svetlicic E, Alarcon LA, Karlsson R, Jers C, Mijakovic I
J. Proteome Res. 24 (9) 4575-4585 [2025-09-05; online 2025-08-07]
Glycoproteomics and MS Proteomics [Service]
PubMed DOI Crossref
Subtelomeric elements provide stability to short telomeres in telomerase-negative cells of the budding yeast Naumovozyma castellii.
Jaiswal RK, Garibo Domingo T, Grunchec H, ..., Elhaik E, Cohn M
Curr Genet 71 (1) 19 [2025-09-03; online 2025-09-03]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genetic Adaptation to Brackish Water and Spawning Season in European Cisco.
Deng Q, Goodall J, Bergenius Nord M, ..., Pettersson OV, Andersson L
Mol. Ecol. - (-) e70094 [2025-09-03; online 2025-09-03]
NGI Long read [Collaborative] NGI Other NGI Stockholm (Genomics Applications) [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Effects of Oligolysine-Polyethylene Glycol Coating on the Biodistribution of Wireframe DNA Origami Nanosheets in Zebrafish Embryos.
Kolonelou C, Engström E, Bräutigam L, ..., Andersson O, Teixeira AI
ACS Nano - (-) - [2025-09-03; online 2025-09-03]
Integrated Microscopy Technologies Stockholm [Collaborative]
PubMed DOI Crossref
Ancient host-associated microbes obtained from mammoth remains.
Guinet B, Oskolkov N, Moreland K, ..., Dalén L, van der Valk T
Cell - (-) - [2025-09-02; online 2025-09-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Plasma membrane labelling efficiency, internalization and partitioning of functionalized fluorescent lipids as a function of lipid structure.
Sezgin E
RSC Chem Biol - (-) - [2025-09-01; online 2025-09-01]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Immune-coagulation dynamics in severe COVID-19 revealed by autoantibody profiling and multi-omics integration.
Ambikan AT, Cederholm A, Rezene S, ..., Landegren N, Gupta S
Sci Rep 15 (1) 32149 [2025-09-01; online 2025-09-01]
Autoimmunity and Serology Profiling [Service]
PubMed DOI Crossref
Host Traits Impact the Outcome of Metagenomic Library Preparation From Dental Calculus Samples Across Diverse Mammals.
Moraitou M, Richards JL, Bolyos C, ..., Portela Miguez R, Guschanski K
Mol Ecol Resour 25 (8) e70039 [2025-09-01; online 2025-09-01]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Variants in the DDX6-CXCR5 autoimmune disease risk locus influence the regulatory network in immune cells and salivary gland.
Wiley MM, Radziszewski M, Khatri B, ..., Nordmark G, Lessard CJ
Ann. Rheum. Dis. 84 (9) 1512-1527 [2025-09-00; online 2025-05-30]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Systematic profiling of cancer-fibroblast interactions reveals drug combinations in ovarian cancer.
Gudoityte G, Sharma O, Leuenberger L, ..., Kallioniemi O, Seashore-Ludlow B
Mol Oncol 19 (9) 2574-2593 [2025-09-00; online 2025-05-24]
Affinity Proteomics Stockholm [Service]
PubMed DOI Crossref
Sex Dependent and Sjögren Disease Like Immune Responses Against Phosphoantigens in Balb/C Mice.
Czwakiel P, Brindefalk B, Eghbali A, ..., Troye-Blomberg M, Faye I
Scand. J. Immunol. 102 (3) e70052 [2025-09-00; online 2025-09-03]
Autoimmunity and Serology Profiling [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Resistance and resilience of co-occurring nitrifying microbial guilds to drying-rewetting stress in soil
Müller LJ, Alicke M, Romdhane S, ..., Saghaï A, Hallin S
Soil Biology and Biochemistry 208 (-) 109846 [2025-09-00; online 2025-09-00]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Ontogeny-specific induction of the KMT2A::AFF1-fusion drives development of a distinct CD24 positive pre-leukemic state.
Calderón AS, Ghazanfari R, Masoumi Z, ..., Bryder D, Böiers C
Leukemia 39 (9) 2099-2111 [2025-09-00; online 2025-07-11]
Clinical Genomics Lund [Service]
PubMed DOI Crossref
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Sci Rep 15 (1) 31568 [2025-08-27; online 2025-08-27]
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Cozzi E, Neddermeyer A, Zhong X, ..., Lennartsson A, Lehmann S
Cancer Gene Ther - (-) - [2025-08-23; online 2025-08-23]
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Vrtačnik P, Merino LG, Subhash S, ..., Revêchon G, Eriksson M
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Forest Ecology and Management 589 (-) 122781 [2025-08-00; online 2025-08-00]
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Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
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Wide-scale geographical analysis of genetic ancestry in the South African Coloured population.
Lankheet I, Hammarén R, Alva Caballero LX, ..., de Jongh M, Schlebusch C
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NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Biofuels Bioprod Bioref - (-) - [2025-07-21; online 2025-07-21]
Swedish NMR Centre [Collaborative]
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The invasion phenotypes of glioblastoma depend on plastic and reprogrammable cell states.
Doroszko M, Stockgard R, Uppman I, ..., Larsson I, Nelander S
Nat Commun 16 (1) 6662 [2025-07-19; online 2025-07-19]
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Interplay between antipredator behavior, parasitism, and gut microbiome in wild stickleback populations.
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Tissue origin and virus specificity shape human CD8+ T cell cytotoxicity.
Niessl J, Müller TR, Constantz C, ..., Jorns C, Buggert M
Sci Immunol 10 (109) eadq4881 [2025-07-18; online 2025-07-18]
Affinity Proteomics Stockholm [Service]
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A Cyanobacterial Screening Platform for Rubisco Mutant Variants.
Hoffmann UA, Schuppe AZ, Knave A, ..., Syrén PO, Hudson EP
ACS Synth Biol 14 (7) 2619-2633 [2025-07-18; online 2025-07-07]
Integrated Microscopy Technologies Stockholm [Service]
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Small RNA in sperm-Paternal contributions to human embryo development.
Isacson S, Karlsson K, Zalavary S, ..., Liffner S, Öst A
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Phenotypic Screening Identifies Flunarizine as an Inhibitor of Radiotherapy-Induced Astrocyte Reactivity with Therapeutic Potential in Glioblastoma
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Dual targeting of G9a and DNMTs induces anti-tumour effects in multiple myeloma
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Validation of Guidelines for Genetic Investigation of Myeloid Neoplasms with Germline Predisposition: Results from a Prospective Cohort Study.
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Clin. Cancer Res. 31 (14) 3062-3071 [2025-07-15; online 2025-05-19]
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CpG island methylator phenotype classification improves risk assessment in pediatric T-cell acute lymphoblastic leukemia.
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Blood 145 (19) 2161-2178 [2025-05-08; online 2025-01-22]
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Bergentall M, Tremaroli V, Sun C, ..., Nieuwdorp M, Bäckhed F
Mol Metab 97 (-) 102162 [2025-05-07; online 2025-05-07]
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Xu Y, Lou D, Chen P, ..., Hu Y, Wang J
Dev. Cell - (-) - [2025-05-06; online 2025-05-06]
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Elucidation of short linear motif-based interactions of the MIT and rhodanese domains of the ubiquitin-specific protease 8.
Konstantinou A, Varga JK, Córdova-Pérez A, ..., Kulathu Y, Ivarsson Y
Biol. Direct 20 (1) 59 [2025-05-06; online 2025-05-06]
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Jiang Z, Pan M, Liu Y, ..., Broberg K, SafeChrom Project Team
J Hazard Mater 488 (-) 137367 [2025-05-05; online 2025-01-25]
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Akiki A, Jacobsson H, Nouairia G, ..., Taflin H, Jansson H
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Pappas F, Johnsson M, Andersson G, Debes PV, Palaiokostas C
Heredity (Edinb) 134 (5) 293-305 [2025-05-00; online 2025-03-18]
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Hemasphere 9 (5) e70136 [2025-05-00; online 2025-05-19]
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Large Inversions Shape Diversification and Genome Evolution in Common Quails.
Ravagni S, Montero-Mendieta S, Leonard JA, ..., Sanchez-Donoso I, Vilà C
Mol. Ecol. 34 (9) e17740 [2025-05-00; online 2025-04-04]
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Hemagglutinin Protease HapA Associated With Vibrio cholerae Outer Membrane Vesicles (OMVs) Disrupts Tight and Adherens Junctions.
Baryalai P, Irenaeus D, Toh E, ..., Nadeem A, Wai SN
J Extracell Vesicles 14 (5) e70092 [2025-05-00; online 2025-05-26]
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Attelind S, Eriksson N, Wadelius M, Hallberg P
Eur J Clin Pharmacol 81 (5) 771-783 [2025-05-00; online 2025-03-21]
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Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Tuomi L, Parris TZ, Rawshani A, ..., Orozco A, Finizia C
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Brain 148 (4) 1099-1105 [2025-04-03; online 2024-11-13]
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Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Non‐Native Earthworms Alter Carbon Sequestration in Arctic Tundra Ecosystems
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JGR Biogeosciences 130 (4) - [2025-04-00; online 2025-04-14]
Swedish NMR Centre [Collaborative]
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Clinical Genomics Lund [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Cell membranes sustain phospholipid imbalance via cholesterol asymmetry.
Doktorova M, Symons JL, Zhang X, ..., Levental KR, Levental I
Cell - (-) - [2025-03-26; online 2025-03-26]
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Affinity Proteomics Stockholm [Collaborative]
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CRISPR Functional Genomics [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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CRISPR Functional Genomics [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Titanium micro-particles are commonly found in soft tissues surrounding dental implants.
Dionigi C, Nagy G, Derks J, ..., Primetzhofer D, Berglundh T
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Genomic Landscape of Divergence in Ballan Wrasse (Labrus bergylta).
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Chemical Biology Consortium Sweden [Collaborative]
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Sox9 and nuclear factor I transcription factors regulate the timing of neurogenesis and ependymal maturation in dopamine progenitors.
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Development 152 (6) - [2025-03-15; online 2025-03-26]
Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Dietary patterns and blood-based biomarkers of Alzheimer's disease in cognitively intact older adults: Findings from a population-based study.
Mrhar A, Carballo-Casla A, Grande G, ..., Calderón-Larrañaga A, Vetrano DL
J Prev Alzheimers Dis - (-) 100124 [2025-03-14; online 2025-03-14]
Affinity Proteomics Stockholm [Collaborative]
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Genetic liability for anxiety and treatment response to the monoamine stabilizer OSU6162 in alcohol dependence: a retrospective secondary analysis.
Hong MG, Khemiri L, Guterstam J, ..., Jayaram-Lindström N, Melas PA
Pharmacol Rep - (-) - [2025-03-12; online 2025-03-12]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
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Historic manioc genomes illuminate maintenance of diversity under long-lived clonal cultivation.
Kistler L, de Oliveira Freitas F, Gutaker RM, ..., Capriles JM, Allaby RG
Science 387 (6738) eadq0018 [2025-03-07; online 2025-03-07]
Ancient DNA [Collaborative]
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Continuous map of early hematopoietic stem cell differentiation across human lifetime.
Komic H, Schmachtel T, Simoes C, ..., Thorén FB, Rieger MA
Nat Commun 16 (1) 2287 [2025-03-07; online 2025-03-07]
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Systems-level immunomonitoring in children with solid tumors to enable precision medicine.
Chen Q, Zhao B, Tan Z, ..., Ljungblad L, Brodin P
Cell 188 (5) 1425-1440.e11 [2025-03-06; online 2025-01-20]
Affinity Proteomics Stockholm [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Genetic Origins of the Kiritimati Population from Central-Eastern Micronesia.
Larena M, Chowdhury AE, Kels MJT, ..., Garcia-Bertrand R, Herrera RJ
Genome Biol Evol 17 (3) - [2025-03-06; online 2025-03-11]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Fungal Pathogens Associated with Tomicus Species in European Forests: Regional Variations and Impacts on Forest Health.
Davydenko K, Baturkin D, Dyshko V, ..., Vasaitis R, Menkis A
Insects 16 (3) - [2025-03-06; online 2025-03-06]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Genomic characterization of the HER2-enriched intrinsic molecular subtype in primary ER-positive HER2-negative breast cancer.
Hohmann L, Sigurjonsdottir K, Campos AB, ..., Nik-Zainal S, Staaf J
Nat Commun 16 (1) 2208 [2025-03-05; online 2025-03-05]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Antisense-mediated regulation of exon usage in the elastic spring region of Titin modulates sarcomere function.
Celik S, Hyrefelt L, Czuba T, ..., Smith JG, Gidlöf O
Cardiovasc. Res. - (-) - [2025-03-05; online 2025-03-05]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
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PopGLen-a Snakemake pipeline for performing population genomic analyses using genotype likelihood-based methods.
Nolen ZJ
Bioinformatics 41 (3) - [2025-03-04; online 2025-03-12]
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Unraveling the role of early coeliac disease diagnosis in the risk of developing immune-mediated renal diseases.
De Luca F, Nilsson S, Truvé K, ..., Haraldsson B, Torinsson Naluai Å
BMC Gastroenterol 25 (1) 125 [2025-03-03; online 2025-03-03]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
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Decreased levels and function of dendritic cells in blood and airways predict COVID-19 severity.
Österberg B, Falck-Jones S, Vangeti S, ..., Färnert A, Smed-Sörensen A
Clin Transl Immunology 14 (3) e70026 [2025-03-03; online 2025-03-03]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
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Indole-3-propionic acid promotes hepatic stellate cells inactivation.
Ilha M, Sehgal R, Matilainen J, ..., Vaittinen M, Pihlajamäki J
J Transl Med 23 (1) 253 [2025-03-01; online 2025-03-01]
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Blood-Based Epigenetic Biomarkers Associated With Incident Chronic Kidney Disease in Individuals With Type 2 Diabetes.
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Diabetes 74 (3) 439-450 [2025-03-01; online 2024-12-23]
Clinical Genomics Lund [Service]
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Time-Resolved Hierarchical Modeling Highlights Metabolites Influencing Productivity and Cell Death in Chinese Hamster Ovary Cells.
Eriksson A, Richelle A, Trygg J, ..., Surowiec I, Jonsson P
Biotechnol J 20 (3) e202400624 [2025-03-00; online 2025-03-11]
Swedish NMR Centre [Service]
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Dahlbäck B, Tran S, Draczkowski P
J. Thromb. Haemost. 23 (3) 849-862 [2025-03-00; online 2024-11-29]
Cryo-EM [Collaborative]
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Genomic prediction of bone strength in laying hens using different sources of information.
Sallam M, Wall H, Wilson PW, ..., de Koning DJ, Johnsson M
Animal 19 (3) 101452 [2025-03-00; online 2025-02-05]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Genome Sequence Resources from Three Isolates of the Apple Canker Pathogen Neonectria ditissima Infecting Forest Trees
Bourras S, Vélëz H, Ihrmark K, ..., Garkava-Gustavsson L, Falk KD
PhytoFrontiers™ 5 (1) 117-119 [2025-03-00; online 2025-03-00]
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Aydın E, Woodward EL, Dushime GT, ..., Paulsson K, Yang M
Genes Chromosomes Cancer 64 (3) e70045 [2025-03-00; online 2025-03-27]
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Masoudzadeh N, Ait Kbaich M, van Veen S, ..., Lemrani M, Rafati S
PLoS Negl Trop Dis 19 (3) e0012812 [2025-03-00; online 2025-03-18]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
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Closed and open structures of the eukaryotic magnesium channel Mrs2 reveal the auto-ligand-gating regulation mechanism.
Li P, Liu S, Wallerstein J, ..., Liin SI, Gourdon P
Nat. Struct. Mol. Biol. 32 (3) 491-501 [2025-03-00; online 2024-11-28]
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Ultra-Sensitive Detection of Bacterial Spores via SERS.
Segervald J, Malyshev D, Öberg R, ..., Wågberg T, Andersson M
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Integrated Microscopy Technologies Umeå [Service]
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Xia Y, Caputo M, Andersson E, ..., Murray S, Mahlapuu M
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Eklund EA, Svensson J, Näslund LS, ..., Raghavan S, Rohlin A
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Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
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Vaivade A, Erngren I, Carlsson H, ..., Burman J, Kultima K
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Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
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Yellow barley xan-m mutants are deficient in the motor unit SECA1 of the SEC1 translocase system.
Stuart D, Ivanova A, Zakhrabekova S, Hansson M
Planta 261 (4) 68 [2025-02-26; online 2025-02-26]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Lundgren S, Huuhtanen J, Keränen M, ..., Lähdesmäki H, Mustjoki S
Sci Transl Med 17 (787) eadl6758 [2025-02-26; online 2025-02-26]
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Nano Lett. 25 (8) 3059-3065 [2025-02-26; online 2025-02-13]
Chemical Biology Consortium Sweden [Technology development]
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Digital sequencing is improved by using structured unique molecular identifiers.
Micallef P, Santamaría ML, Escobar M, ..., Vannas C, Ståhlberg A
Genome Biol. 26 (1) 37 [2025-02-25; online 2025-02-25]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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DNA methylation patterns contribute to changes of cellular differentiation pathways in leukocytes with LOY from patients with Alzheimer´s disease.
Jąkalski M, Bruhn-Olszewska B, Rychlicka-Buniowska E, ..., Ingelsson M, Dumanski JP
Cell. Mol. Life Sci. 82 (1) 93 [2025-02-25; online 2025-02-25]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Aberrant growth and expansion in Penium margaritaceum triggered by disruption of microtubules and the cell wall.
LoRicco JG, Malone S, Becker A, ..., Epstein R, Domozych DS
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Gomez Toledo A, Chowdhury S, Hjortswang E, ..., Rasmussen M, Malmström J
Nat Commun 16 (1) - [2025-02-24; online 2025-02-24]
Structural Proteomics [Collaborative]
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Malak M, Qian C, James J, ..., Grantham J, Ericson MB
Sci Rep 15 (1) 6377 [2025-02-21; online 2025-02-21]
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Comprehensive Gene Expression Analysis in Papillary Thyroid Carcinoma Reveals a Transcriptional Profile Associated with Reduced Radioiodine Avidity.
Condello V, Marchettini C, Ihre-Lundgren C, Nilsson JN, Juhlin CC
Endocr. Pathol. 36 (1) 4 [2025-02-21; online 2025-02-21]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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The beneficial effects of a probiotic mix on bone and lean mass are dependent on the diet in female mice.
Ohlsson C, Lawenius L, Jiang Y, ..., Henning P, Sjögren K
Sci Rep 15 (1) 6182 [2025-02-20; online 2025-02-20]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
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Age-Dependent Pleomorphism in Mycobacterium monacense Cultures.
Ramesh M, Behra PRK, Pettersson BMF, Dasgupta S, Kirsebom LA
Microorganisms 13 (3) - [2025-02-20; online 2025-02-20]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Toward target 2035: EUbOPEN - a public-private partnership to enable & unlock biology in the open.
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RSC Med Chem 16 (2) 457-464 [2025-02-19; online 2024-11-29]
Chemical Biology Consortium Sweden [Collaborative]
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Temporal dynamics of airborne fungi in Swedish forest nurseries.
Larsson R, Menkis A, Olson Å
Appl. Environ. Microbiol. 91 (2) e0130624 [2025-02-19; online 2025-01-16]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Carravilla P, Andronico L, Schlegel J, ..., Lorent J, Sezgin E
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Integrated Microscopy Technologies Stockholm [Service]
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Rödin-Mörch P, Bunikis I, Choi E, ..., Proux-Wéra E, Höglund J
G3 (Bethesda) - (-) - [2025-02-19; online 2025-02-19]
NGI Long read [Collaborative] NGI Stockholm (Genomics Production) [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
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Circular RNA circASH1L(4,5) protects microRNA-129-5p from target-directed microRNA degradation in human skin wound healing.
Wang Q, Niu G, Liu Z, ..., Sommar P, Xu Landén N
Br J Dermatol 192 (3) 468-480 [2025-02-18; online 2024-10-18]
Bioinformatics Support for Computational Resources [Service]
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An Evolutionary Mosaic Challenges Traditional Monitoring of a Foundation Species in a Coastal Environment-The Baltic Fucus vesiculosus.
Pereyra RT, Kinnby A, Le Moan A, ..., Knutsen H, Johannesson K
Mol. Ecol. - (-) e17699 [2025-02-17; online 2025-02-17]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Microbial communities in slow sand filters for drinking water treatment adapt to organic matter altered by ozonation.
Rosenqvist T, Hilding J, Suarez C, Paul CJ
Water Res. 270 (-) 122843 [2025-02-15; online 2024-11-23]
Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Methodological aspects of investigating the resistome in pig farm environments.
Ladyhina V, Rajala E, Sternberg-Lewerin S, ..., Bongcam-Rudloff E, Dicksved J
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Clinical Genomics [Collaborative] Clinical Genomics Linköping [Collaborative] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Functionally characterizing obesity-susceptibility genes using CRISPR/Cas9, in vivo imaging and deep learning.
Mazzaferro E, Mujica E, Zhang H, ..., Allalou A, den Hoed M
Sci Rep 15 (1) 5408 [2025-02-13; online 2025-02-13]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Chloroplast genomic insights into adaptive evolution and rapid radiation in the genus Passiflora (Passifloraceae).
Cauz-Santos LA, da Costa ZP, Sader MA, van den Berg C, Vieira MLC
BMC Plant Biol. 25 (1) 192 [2025-02-13; online 2025-02-13]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Imaging Single Particle Profiler to Study Nanoscale Bioparticles Using Conventional Confocal Microscopy.
Sych T, Görgens A, Steiner L, ..., El Andaloussi S, Sezgin E
Nano Lett. 25 (6) 2173-2180 [2025-02-12; online 2025-01-29]
Integrated Microscopy Technologies Stockholm [Service]
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Chromosome-scale genome assembly reveals how repeat elements shape non-coding RNA landscapes active during newt limb regeneration.
Brown T, Mishra K, Elewa A, ..., Yun MH, Simon A
Cell Genomics 5 (2) 100761 [2025-02-12; online 2025-01-27]
NGI Long read [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Rare and common single nucleotide variants in childhood-onset systemic lupus erythematosus.
Sayadi A, Sandling JK, Eloranta ML, ..., Rönnblom L, DISSECT Consortium
Lupus Sci Med 12 (1) - [2025-02-11; online 2025-02-11]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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High-content morphological profiling by Cell Painting in 3D spheroids
Ringers C, Holmberg D, Flobak Å, ..., Carreras Puigvert J, Spjuth O
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Chemical Biology Consortium Sweden [Technology development]
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In vivo regulation of the monocyte phenotype by Mycobacterium marinum and the ESX-1 type VII secretion system.
Munke K, Wulff L, Lienard J, Carlsson F, Agace WW
Sci Rep 15 (1) 4545 [2025-02-07; online 2025-02-07]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Whole genome sequencing in early onset advanced heart failure.
Linnér E, Czuba T, Gidlöf O, ..., Ehrencrona H, Smith JG
Sci Rep 15 (1) 4306 [2025-02-05; online 2025-02-05]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Testosterone exacerbates neutrophilia and cardiac injury in myocardial infarction via actions in bone marrow.
Svedlund Eriksson E, Lantero Rodriguez M, Halvorsen B, ..., Dahl TB, Tivesten Å
Nat Commun 16 (1) 1142 [2025-02-05; online 2025-02-05]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
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Intranasal Delivery of a Ghrelin Mimetic Engages the Brain Ghrelin Signaling System in Mice.
Poelman R, Le May MV, Schéle E, Stoltenborg I, Dickson SL
Endocrinology 166 (3) - [2025-02-05; online 2025-01-15]
Integrated Microscopy Technologies Gothenburg [Service]
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Reducing methane emissions by developing low-fumarate high-ethanol eco-friendly rice.
Jin Y, Liu T, Hu J, ..., Schnürer A, Sun C
Mol Plant 18 (2) 333-349 [2025-02-03; online 2025-02-05]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Dissociable genetic influences on eye movements during abstract versus naturalistic social scene viewing in infancy.
Portugal AM, Taylor MJ, Tammimies K, Ronald A, Falck-Ytter T
Sci Rep 15 (1) 4100 [2025-02-03; online 2025-02-03]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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The expanded genome of Hexamita inflata, a free-living diplomonad.
Akdeniz Z, Havelka M, Stoklasa M, ..., Andersson JO, Tachezy J
Sci Data 12 (1) 192 [2025-02-01; online 2025-02-01]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Unravelling the dominant role of phosphorylation degree in governing the functionality of reassembled casein micelles: Implications for future dairy production through precision fermentation
Che J, Fan Z, Bijl E, ..., Poulsen NA, Larsen LB
Food Hydrocolloids 159 (-) 110615 [2025-02-00; online 2025-02-00]
Integrated Microscopy Technologies Gothenburg [Service]
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Unraveling the Genetics of Shared Clinical and Serological Manifestations in Patients With Systemic Inflammatory Autoimmune Diseases.
Bianchi M, Kozyrev SV, Notarnicola A, ..., Lindblad-Toh K, with the DISSECT consortium and the ImmunoArray consortium
Arthritis & rheumatology (Hoboken, N.J.) 77 (2) 212-225 [2025-02-00; online 2024-10-25]
Bioinformatics Support for Computational Resources [Service] NGI SNP genotyping [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Single cell sequencing reveals shared clonal signatures in non-malignant B- and tumor cells in T-prolymphocytic leukemia
Hesselager C, Thörn I, Marincevic M, ..., Baliakas P, Amini RM
Blood Neoplasia - (-) 100076 [2025-02-00; online 2025-02-00]
Clinical Genomics [Collaborative] Clinical Genomics Uppsala [Collaborative]
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Robust approach for production of the human oncology target Aurora kinase B in complex with its binding partner INCENP.
Mattsson J, Rogne P, Landström M, Wolf-Watz M
Biochimie 229 (-) 129-140 [2025-02-00; online 2024-10-18]
Swedish NMR Centre [Service]
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Reduced Alcohol Consumption Following Ablation of Cholinergic Interneurons in the Nucleus Accumbens of Wistar Rats.
Loftén A, Cadeddu D, Danielsson K, ..., Söderpalm B, Ericson M
Addict Biol 30 (2) e70022 [2025-02-00; online 2025-02-12]
Integrated Microscopy Technologies Gothenburg [Service]
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RNA Sequencing Reveals the Long Non-Coding RNA Signature in Psoriasis Keratinocytes and Identifies CYDAER as a Long Non-Coding RNA Regulating Epidermal Differentiation.
Freisenhausen JC, Luo L, Kelemen E, ..., Pivarcsi A, Sonkoly E
Exp. Dermatol. 34 (2) e70054 [2025-02-00; online 2025-02-15]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Plasma brain-derived tau correlates with cerebral infarct volume.
Gonzalez-Ortiz F, Holmegaard L, Andersson B, ..., Jern C, Stanne TM
J. Intern. Med. 297 (2) 173-185 [2025-02-00; online 2024-12-05]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
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Phospho-tau serine-262 and serine-356 as biomarkers of pre-tangle soluble tau assemblies in Alzheimer's disease.
Islam T, Hill E, Abrahamson EE, ..., Blennow K, Karikari TK
Nat. Med. 31 (2) 574-588 [2025-02-00; online 2025-02-10]
Integrated Microscopy Technologies Gothenburg [Service]
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Pain in idiopathic scoliosis not associated with known genetic variants for pain.
Cheng T, Diarbakerli E, Simony A, ..., Einarsdottir E, Gerdhem P
Pain Rep 10 (1) e1227 [2025-02-00; online 2024-12-19]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Navigating the maze of mass spectra: a machine-learning guide to identifying diagnostic ions in O-glycan analysis.
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Anal Bioanal Chem 417 (5) 931-943 [2025-02-00; online 2024-08-24]
Glycoproteomics and MS Proteomics [Collaborative]
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Ancient DNA [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Applied Soil Ecology 206 (-) 105777 [2025-02-00; online 2025-02-00]
Bioinformatics Support for Computational Resources [Service]
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Impact of excess sugar on the whole genome DNA methylation pattern in human sperm.
Jönsson J, Perfilyev A, Kugelberg U, ..., Öst A, Ling C
Epigenomics 17 (2) 89-104 [2025-02-00; online 2024-12-20]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Extracellular Histones as Exosome Membrane Proteins Regulated by Cell Stress.
Singh B, Fredriksson Sundbom M, Muthukrishnan U, ..., Haney M, Gilthorpe JD
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Steward RA, Ortega Giménez J, Choudhary S, ..., Van Aken O, Runemark A
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Earliest modern human genomes constrain timing of Neanderthal admixture.
Sümer AP, Rougier H, Villalba-Mouco V, ..., Prüfer K, Krause J
Nature 638 (8051) 711-717 [2025-02-00; online 2024-12-12]
Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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DMI fungicide resistance in Zymoseptoria tritici is unlinked to geographical origin and genetic background: a case study in Europe.
Oreiro EG, Samils B, Kildea S, ..., Zhan J, Andersson B
Pest Manag Sci 81 (2) 1103-1112 [2025-02-00; online 2024-11-06]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Extracellular vesicle surface engineering with integrins (ITGAL & ITGB2) to specifically target ICAM-1-expressing endothelial cells.
Bergqvist M, Park KS, Karimi N, ..., Lässer C, Lötvall J
J Nanobiotechnology 23 (1) 64 [2025-01-30; online 2025-01-30]
Glycoproteomics and MS Proteomics [Service] Integrated Microscopy Technologies Gothenburg [Service]
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Diffusion Smart-seq3 of breast cancer spheroids to explore spatial tumor biology and test evolutionary principles of tumor heterogeneity.
Cougnoux A, Mahmoud L, Johnsson PA, ..., Sandberg R, Hausser J
Sci Rep 15 (1) 3811 [2025-01-30; online 2025-01-30]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Modulation of biological activities in adipose derived stem cells by histone deacetylation.
Abdallah S, Tabebi M, Qanadilo S, ..., Elmasry M, El-Serafi A
Sci Rep 15 (1) 3629 [2025-01-29; online 2025-01-29]
Clinical Genomics [Collaborative] Clinical Genomics Linköping [Collaborative]
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The di-leucine motif in the host defense peptide LL-37 is essential for initiation of autophagy in human macrophages.
Rekha RS, Padhi A, Frengen N, ..., Guðmundsson GH, Bergman P
Cell Rep 44 (1) 115031 [2025-01-28; online 2024-12-20]
Bioinformatics Support for Computational Resources [Service]
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Lack of ST2 aggravates glioma invasiveness, vascular abnormality, and immune suppression.
Wicher G, Roy A, Vaccaro A, ..., Dimberg A, Forsberg-Nilsson K
Neurooncol Adv 7 (1) vdaf010 [2025-01-27; online 2025-01-27]
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Association between alcohol consumption and peripheral artery disease: two de novo prospective cohorts and a systematic review with meta-analysis.
Yuan S, Wu J, Chen J, ..., Åkesson A, Larsson SC
Eur J Prev Cardiol 32 (2) 149-155 [2025-01-27; online 2024-04-16]
Bioinformatics Support for Computational Resources [Service]
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Exploring a pico-well based scRNA-seq method (HIVE) for simplified processing of equine bronchoalveolar lavage cells.
Fegraeus K, Riihimäki M, Nordlund J, ..., Wernersson S, Raine A
PLoS ONE 20 (1) e0317343 [2025-01-24; online 2025-01-24]
NGI Short read [Technology development] NGI Uppsala (SNP&SEQ Technology Platform) [Technology development] National Genomics Infrastructure [Technology development]
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A de novo, mosaic and complex chromosome 21 rearrangement causes APP triplication and familial autosomal dominant early onset Alzheimer disease.
Ehn E, Eisfeldt J, Laffita-Mesa JM, ..., Nennesemo I, Graff C
Sci Rep 15 (1) 2912 [2025-01-23; online 2025-01-23]
Clinical Genomics [Service] Clinical Genomics Stockholm [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Visualization using NIPTviewer support the clinical interpretation of noninvasive prenatal testing results.
Smeds P, Baranowska Körberg I, Melin M, Ladenvall C
BMC Med Genomics 18 (1) 15 [2025-01-20; online 2025-01-20]
Clinical Genomics [Technology development] Clinical Genomics Uppsala [Technology development]
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Life-history adaptation under climate warming magnifies the agricultural footprint of a cosmopolitan insect pest.
Burc E, Girard-Tercieux C, Metz M, ..., Hart AF, Berger D
Nat Commun 16 (1) 827 [2025-01-18; online 2025-01-18]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Somatic CAG repeat expansion in blood associates with biomarkers of neurodegeneration in Huntington's disease decades before clinical motor diagnosis.
Scahill RI, Farag M, Murphy MJ, ..., Langbehn DR, Tabrizi SJ
Nat. Med. - (-) - [2025-01-17; online 2025-01-17]
Glycoproteomics and MS Proteomics [Service]
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Structure of the T=13 capsid of infectious pancreatic necrosis virus (IPNV)-a salmonid birnavirus.
Munke A, Ahmed Abdelrahim Gamil A, Mikalsen AB, ..., Evensen Ø, Okamoto K
J. Virol. - (-) e0145424 [2025-01-16; online 2025-01-16]
Cryo-EM [Service]
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A thermoplastic chip for 2D and 3D correlative assays combining screening and high-resolution imaging of immune cell responses.
van Ooijen H, Verron Q, Zhang H, ..., Sandström N, Önfelt B
Cell Reports Methods - (-) 100965 [2025-01-16; online 2025-01-16]
Integrated Microscopy Technologies Stockholm [Service]
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Liquid crystal nanoparticles for oral combination antibiotic therapies: A strategy towards protecting commensal gut bacteria during treatment.
He X, Karlsson PA, Xiong R, ..., Bergström CAS, Hubert M
Journal of Colloid and Interface Science 678 (Pt B) 287-300 [2025-01-15; online 2024-08-31]
Cryo-EM [Service]
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The Progression of Mycosis Fungoides During Treatment with Mogamulizumab: A BIO-MUSE Case Study of the Tumor and Immune Response in Peripheral Blood and Tissue.
Johansson A, Kalliara E, Belfrage E, ..., Drott K, Ek S
Biomedicines 13 (1) - [2025-01-14; online 2025-01-14]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Clinical Genomics Lund [Service]
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An activin receptor-like kinase 1-governed monocytic lineage shapes an immunosuppressive landscape in breast cancer metastases.
Safaee Talkhoncheh M, Sjölund J, Bolivar P, ..., Bocci M, Pietras K
J. Clin. Invest. 135 (5) - [2025-01-14; online 2025-01-14]
Clinical Genomics Lund [Service]
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Effects of compost amendments and experimental drought on grassland soil microbial communities.
Guasconi D, Hugelius G, Clemmensen KE, ..., Roth N, Fransson P
FEMS Microbiol. Lett. 372 (-) - [2025-01-10; online 2025-10-06]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
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Airway MMP-12 and DNA methylation in COPD: an integrative approach.
Eriksson Ström J, Kebede Merid S, Linder R, ..., Melén E, Behndig AF
Respir. Res. 26 (1) 10 [2025-01-10; online 2025-01-10]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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The type of environment has a greater impact on the larval microbiota of Anopheles arabiensis than on the microbiota of their breeding water.
Assentato L, Nilsson LKJ, Brunius C, ..., Hopkins RJ, Terenius O
FEMS Microbiol. Ecol. 101 (1) - [2025-01-07; online 2024-12-19]
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Stress granule formation is regulated by signaling machinery involving Sch9/Ypk1, sphingolipids, and Ubi4.
Chen L, Gao Y, Hao X, ..., Sunnerhagen P, Liu B
Theranostics 15 (5) 1987-2005 [2025-01-06; online 2025-01-06]
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Spatial transcriptomics unveils estrogen-modulated immune responses and structural alterations in the ectocervical mucosa of depot medroxyprogesterone acetate users.
Kaldhusdal V, Boger MF, Tjernlund A, ..., Czarnewski P, Broliden K
Sci Rep 15 (1) 1014 [2025-01-06; online 2025-01-06]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Short read [Service] NGI Spatial omics [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Improving taxonomic inference from ancient environmental metagenomes by masking microbial-like regions in reference genomes.
Oskolkov N, Jin C, Clinton SL, ..., Heintzman PD, van der Valk T
Gigascience 14 (-) - [2025-01-06; online 2025-10-03]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
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Best-practice guidance for Earth BioGenome Project sample collection and processing: progress and challenges in biodiverse reference genome creation.
Lawniczak MKN, Kocot KM, Astrin JJ, ..., Subcommittee EBPSaP, ,
Gigascience 14 (-) - [2025-01-06; online 2025-05-29]
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Analysis-ready VCF at Biobank scale using Zarr.
Czech E, Tyler W, White T, ..., Hammerbacher J, Kelleher J
Gigascience 14 (-) - [2025-01-06; online 2025-06-02]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
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Model-informed drug development for antimicrobials: translational pharmacokinetic-pharmacodynamic modelling of apramycin to facilitate prediction of efficacious dose in complicated urinary tract infections.
Hernández-Lozano I, Aranzana-Climent V, Cao S, ..., Vingsbo Lundberg C, Friberg LE
J. Antimicrob. Chemother. 80 (1) 301-310 [2025-01-03; online 2024-11-16]
Bioinformatics Support for Computational Resources [Service]
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Nucleobase catalysts for the enzymatic activation of 8-oxoguanine DNA glycosylase 1
Hank EC, D'Arcy-Evans N, Scaletti ER, ..., Helleday T, Michel M
- - (-) - [2025-01-02; online 2025-01-02]
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Cellular heterogeneity in metabolism and associated microbiome of a non-model phytoflagellate.
Jeevannavar A, Florenza J, Divne AM, Tamminen M, Bertilsson S
ISME J 19 (1) - [2025-01-02; online 2025-03-10]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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A Rationally Designed Azobenzene Photoswitch for DNA G-Quadruplex Regulation in Live Cells.
Dudek M, López-Pacios L, Sabouri N, ..., Martinez-Fernandez L, Deiana M
Angew. Chem. Int. Ed. Engl. 64 (1) e202413000 [2025-01-02; online 2024-11-06]
Chemical Biology Consortium Sweden [Service]
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Single-cell proteo-transcriptomic profiling reveals altered characteristics of stem and progenitor cells in patients receiving cytoreductive hydroxyurea in early-phase chronic myeloid leukemia.
Komic H, Nilsson MS, Wennström L, ..., Thorén FB, Martner A
Haematologica 110 (1) 117-128 [2025-01-01; online 2025-01-01]
NGI Short read [Service] NGI Stockholm (Genomics Production) NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
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Non-nucleosomal (CENP-A/H4)2 - DNA complexes as a possible platform for centromere organization.
Ali-Ahmad A, Mors M, Carrer M, ..., Cascella M, Sekulić N
bioRxiv - (-) - [2025-01-01; online 2025-01-01]
Cryo-EM [Service]
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Dark carbon fixation is a common process in the water column of stratified boreal lakes.
Martin G, Rissanen AJ, Garcia SL, Peura S
Sci. Total Environ. 958 (-) 177433 [2025-01-01; online 2024-12-10]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
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Trees First Inhibit Then Promote Litter Decomposition in the Subarctic.
Jonsson M, Clemmensen KE, Castaño C, Parker TC
Ecol. Lett. 28 (1) e70063 [2025-01-00; online 2025-01-20]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service] Swedish NMR Centre [Service]
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Structural basis for lipid transfer by the ATG2A-ATG9A complex.
Wang Y, Dahmane S, Ti R, ..., Carlson LA, Stjepanovic G
Nat. Struct. Mol. Biol. 32 (1) 35-47 [2025-01-00; online 2024-08-22]
Cryo-EM [Service]
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Plasma proteomics in epilepsy: Network-based identification of proteins associated with seizures.
Ashtiani SH, Akel S, Berger E, Zelano J
Epilepsy Res 209 (-) 107480 [2025-01-00; online 2024-11-19]
Glycoproteomics and MS Proteomics [Collaborative]
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Influence of gas composition on carbonation of quicklime granules derived from different limestone types
Olovsson K, Ma C, Niinipuu M, Eriksson M, Broström M
Chemical Engineering Journal 506 (-) 159543 [2025-01-00; online 2025-01-00]
Integrated Microscopy Technologies Umeå [Service]
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High temperature exposure of MgO-based refractory material to biomass and coal ash with/without quicklime
Wagri NK, Carlborg M, Eriksson M, ..., Broström M, Andersson BM
Ceramics International 51 (3) 3665-3674 [2025-01-00; online 2025-01-00]
Integrated Microscopy Technologies Umeå [Service]
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Evaluation of nationwide analysis surveillance for methicillin-resistant Staphylococcus aureus within Genomic Medicine Sweden.
Tång Hallbäck E, Björkman JT, Dyrkell F, ..., Sikora P, Mölling P
Microb Genom 11 (1) - [2025-01-00; online 2025-01-27]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative] Clinical Genomics Uppsala [Collaborative]
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DNA methylation in cord blood partially mediates the effects of prepregnancy BMI on early childhood offspring BMI.
Maguolo A, Jönsson J, Perfilyev A, ..., Renault KM, Ling C
Obesity (Silver Spring) 33 (1) 177-189 [2025-01-00; online 2024-12-11]
Clinical Genomics Lund [Service]
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Chemogenomic Screening in a Patient‐Derived 3D Fatty Liver Disease Model Reveals the CHRM1‐TRPM8 Axis as a Novel Module for Targeted Intervention
Youhanna S, Kemas AM, Wright SC, ..., Sundström M, Lauschke VM
Adv Sci (Weinh) 12 (3) - [2025-01-00; online 2024-11-28]
Chemical Biology Consortium Sweden [Service]
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A Non-Centrifugation Method to Concentrate and Purify Extracellular Vesicles Using Superabsorbent Polymer Followed by Size Exclusion Chromatography.
Bergqvist M, Lässer C, Crescitelli R, Park KS, Lötvall J
J Extracell Vesicles 14 (1) e70037 [2025-01-00; online 2025-01-22]
Integrated Microscopy Technologies Gothenburg [Service]
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Producing dissolving pulp from agricultural waste
Wojtasz J, Sjöstedt N, Storm B, ..., Rydberg T, Bernin D
RSC Sustain. 3 (5) 2210-2220 [2025-00-00; online 2025-00-00]
Swedish NMR Centre [Service]
SciLifeLab Data Centre
Publications 9.5.1