Ellegren H

From high masked to high realized genetic load in inbred Scandinavian wolves.

Smeds L, Ellegren H

Mol. Ecol. 32 (7) 1567-1580 [2023-04-00; online 2022-12-13]

Bioinformatics Support for Computational Resources [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Genomic inference of contemporary effective population size in a large island population of collared flycatchers (Ficedula albicollis).

Nadachowska-Brzyska K, Dutoit L, Smeds L, ..., Gustafsson L, Ellegren H

Mol. Ecol. 30 (16) 3965-3973 [2021-08-00; online 2021-07-01]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Whole-genome analyses provide no evidence for dog introgression in Fennoscandian wolf populations.

Smeds L, Aspi J, Berglund J, ..., Tirronen K, Ellegren H

Evol Appl 14 (3) 721-734 [2021-03-00; online 2020-11-09]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Tissue-specific patterns of regulatory changes underlying gene expression differences among Ficedula flycatchers and their naturally occurring F1 hybrids.

Mugal CF, Wang M, Backström N, ..., Qvarnström A, Ellegren H

Genome Res. 30 (12) 1727-1739 [2020-12-00; online 2020-11-03]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Recent introgression between Taiga Bean Goose and Tundra Bean Goose results in a largely homogeneous landscape of genetic differentiation.

Ottenburghs J, Honka J, Müskens GJDM, Ellegren H

Heredity (Edinb) 125 (1-2) 73-84 [2020-08-00; online 2020-05-26]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

How Linked Selection Shapes the Diversity Landscape in Ficedula Flycatchers

Rettelbach A, Nater A, Ellegren H

Genetics 212 (1) 277-285 [2019-05-01; online 2019-03-14]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Genotype-free estimation of allele frequencies reduces bias and improves demographic inference from RADSeq data.

Warmuth VM, Ellegren H

Mol Ecol Resour 19 (3) 586-596 [2019-05-00; online 2019-04-17]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Footprints of adaptive evolution revealed by whole Z chromosomes haplotypes in flycatchers.

Nadachowska-Brzyska K, Burri R, Ellegren H

Mol. Ecol. 28 (9) 2290-2304 [2019-05-00; online 2019-05-29]

Bioinformatics Support for Computational Resources [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]

Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species.

Künstner A, Wolf JB, Backström N, ..., Warren WC, Ellegren H

Mol. Ecol. 19 Suppl 1 (Suppl 1) 266-276 [2010-03-00; online 2010-04-02]

NGI Stockholm (Genomics Applications) NGI Stockholm (Genomics Production) National Genomics Infrastructure