Publications 2026

Table
JSON
CSV
XLSX
TXT

473 publications

PubMed DOI Crossref
The mycobacterial selenocysteine machinery: presence and expression.
Behra PRK, Ramesh M, Pettersson BMF, Kirsebom LA
RNA Biol 23 (1) 1-19 [2026-12-00; online 2026-08-05]
NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The mouse gastric surface epithelial cell and its response to early Helicobacter pylori infection.
Erhardsson M, Santos L, Benktander J, ..., Thorell K, Lindén S
Virulence 17 (1) 2645859 [2026-12-00; online 2026-03-25]
Integrated Microscopy Technologies Gothenburg [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Sewage surveillance for assessing clinical antibiotic resistance prevalence: Combining metagenomic and phenotypic data.
Flach CF, Berglund F, Osena G, Huijbers PMC, Larsson DGJ
One Health 23 (-) 101485 [2026-12-00; online 2026-06-18]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Cyathostomin species richness and alpha diversity at egg reappearance following fecal egg count-based selective ivermectin treatment.
Halvarsson P, Hedberg-Alm Y, Tydén E
Vet Parasitol 348 (-) 110923 [2026-12-00; online 2026-09-10]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
CpG site- and methylation level-dependent measurement variability across three bisulfite-based DNA methylation assays.
Rangani F, Needhamsen M, Kular L, Jagodic M, Pahlevan Kakhki M
Epigenetics 21 (1) 2753261 [2026-12-00; online 2026-10-29]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Controlling for DNA dosage with whole-genome sequencing improves ATAC-seq peak calling.
Vroland C, Salma M, Zhigulev A, ..., Bréhélin L, Lecellier CH
NAR Genom Bioinform 8 (4) lqag119 [2026-12-00; online 2026-10-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A selective inhibitor reveals roles for LONP1 in mitochondrial proteostasis and OXPHOS dependencies.
Szilagyi Z, Michon P, Pardo-Hernández C, ..., Green J, Gustafsson CM
Life Sci. Alliance 9 (12) - [2026-12-00; online 2026-10-01]
CRISPR Functional Genomics [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Direct Visualization of Na,K-ATPase Clustering by 3D DNA-PAINT MINFLUX Nanoscopy.
Stojcic B, Agostinho A, Panconi L, Blom H, Brismar H
Nano Lett. - (-) - [2026-11-10; online 2026-11-10]
Integrated Microscopy Technologies Stockholm [Technology development]
PubMed DOI Crossref
Cell surface remodeling caused by the loss of the flippase subunit TMEM30A in immune cells
Gurdap CO, Ragaller F, Muller M, ..., Sattentau QJ, Sezgin E
J Cell Sci 139 (21) - [2026-11-01; online 2026-08-14]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Single-cell sequencing reveals transcriptional and immunogenetic diversity in stereotyped chronic lymphocytic leukemia.
Oder B, Rabbani L, Del Peso Santos T, ..., Österholm C, Rosenquist R
Blood Neoplasia 3 (4) 100282 [2026-11-00; online 2026-08-11]
NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Risk factors for posttransplant lymphoproliferative disorder (PTLD) in pediatric heart recipients were associated with impairment of the immune system - a multicenter study from Sweden.
Ekman-Joelsson BM, Odermarsky M, Tran-Lundmark K, ..., Mellgren K, Ekwall O
JHLT Open 14 (-) 100673 [2026-11-00; online 2026-08-27]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Impact of brain and blood iron on glial density in aging, and relations to cognition: evidence from a 5-year longitudinal multimodal MRI-PET study.
Kalpouzos G, Falahati F, Malmros J, ..., Morén AF, Papenberg G
Brain, Behavior, and Immunity 138 (-) 106954 [2026-11-00; online 2026-08-12]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
GloBIAS survey results - An insight into the global bioimage analysis community.
de la Ballina LR, Walther CG, Condon ND, ..., Corbat AA, Levet F
J Microsc 304 (2) 83-92 [2026-11-00; online 2026-07-27]
BioImage Informatics [Collaborative] Bioinformatics (NBIS) [Collaborative]
DOI Crossref
Decomposition and mycorrhizal suppression of saprotrophs remain stable after wildfire and clearcut disturbance in boreal forests
Callebaut T, Gundale MJ, Buness V, ..., van Duuren I, Metcalfe DB
New Phytol - (-) - [2026-10-30; online 2026-10-30]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Widespread selection of antibiotic resistance within hospital sewers.
Gray DA, Nhung NT, Coertze RD, ..., Flach CF, Larsson DGJ
Nat Commun 17 (1) - [2026-10-29; online 2026-10-29]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Chromosome-level assembly of Lemnamoeba sinaloensis gen. nov. et sp. nov. (Apofilosa) reveals dynamic genome evolution in Rhizaria
Hiltunen Thorén M, Onuț-Brännström I, Zlatogursky V, ..., Holzer AS, Burki F
BMC Genomics 27 (1) - [2026-10-28; online 2026-10-28]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
DOI Crossref
APPROCCIO INTERDISCIPLINARE PER LO STUDIO DEI CAVALLI DI ROMA NEL MEDIOEVO
Minniti C, Corbino CA, Modi A, Caramelli D
- - (-) 319-334 [2026-10-28]
Ancient DNA [Service]
PubMed DOI Crossref
Diffuse large B cell lymphoma in rheumatoid arthritis express polyreactive and autoreactive BCRs binding protein modifications.
Euler N, Gonzalez-Sanchez AC, Clark E, ..., Baecklund E, Grönwall C
Arthritis Res. Ther. 28 (1) - [2026-10-27; online 2026-10-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genome-wide association study of human papillomavirus infection and persistence in women living with HIV in Rwanda.
Naluai ÅT, Uwamungu S, Andersson M, ..., Hasséus B, Giglio D
Infect Agent Cancer 21 (1) - [2026-10-26; online 2026-10-26]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Retroviral insertions contributed to the divergence of human and chimpanzee brains.
Gerdes P, Karlsson O, Garza R, ..., Eichler EE, Jakobsson J
Sci Adv 12 (43) eaeg5791 [2026-10-23; online 2026-10-23]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The kinase inhibitor dabrafenib halts progression of cerebral cavernous malformations in a BRAF-independent manner.
Arce M, Huang H, Rorsman C, ..., Claesson-Welsh L, Magnusson PU
Sci Transl Med 18 (872) eadr0448 [2026-10-21; online 2026-10-21]
BioImage Informatics [Collaborative] Bioinformatics (NBIS) [Collaborative] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
High-content morphological profiling by Cell Painting in 3D spheroids.
Ringers C, Holmberg D, Larsson A, ..., Carreras-Puigvert J, Spjuth O
Nat Commun 17 (1) - [2026-10-21; online 2026-10-21]
Chemical Biology Consortium Sweden [Technology development]
PubMed DOI Crossref
Whole genome pool sequencing reveals genomic variation in field Haemonchus contortus isolates in Sweden.
Liu N, Baltrušis P, Ohlsson Å, Höglund J, Mikko S
BMC Genomics 27 (1) - [2026-10-17; online 2026-10-17]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Dysregulation of glycogen metabolism in cardiomyopathy caused by glycogenin-1 (GYG1) missense variants.
Visuttijai K, Hedberg-Oldfors C, Braun O, ..., Karason K, Oldfors A
J. Clin. Endocrinol. Metab. 111 (11) 3181-3195 [2026-10-16; online 2026-05-21]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service] Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
High-resolution structure of monomeric photosystem I from Thermosynechococcus vestitus.
Boyka J, Gaullier G, Forsman J, ..., Zouni A, Blikstad C
Photosynth Res 164 (6) - [2026-10-15; online 2026-10-15]
Cryo-EM [Service]
PubMed DOI Crossref
A Multi-Omic Phenobank Reveals Axes of Glioblastoma Growth, Invasion, and Therapeutic Vulnerability.
Krona C, Kundu S, Rosen E, ..., Mangukiya HB, Nelander S
Neuro-oncology - (-) - [2026-10-12; online 2026-10-12]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
2C-RT Quantifies Genome-Wide DNA Replication Perturbations and Redefines RIF1-CDC7 Regulation of Replication Timing
Urien B, Kuwong PY, Giglio G, ..., Elsasser S, Lemmens B
- - (-) - [2026-10-12; online 2026-10-12]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Expression patterns of CD24 and CD27 resolve the origins and gradual differentiation of CD11c+ atypical memory B-cells after malaria infection.
Courey-Ghaouzi AD, Kleberg L, Mousavian Z, ..., Färnert A, Sundling C
EMBO J. - (-) - [2026-10-11; online 2026-10-11]
NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Progesterone Modulates Protein Synthesis in Osteoarthritic Fibroblast-like Synoviocytes.
Askar F, Chatziagorou G, Wüstenhagen S, ..., Labusca L, Corciulo C
Int J Mol Sci 27 (19) - [2026-10-07; online 2026-10-07]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Paleogenomics and habitat modeling reveal temperate Eurasian origins of woolly rhinoceroses
Xiao-Le Lei , Jiaoyang Ruan , Xueyuan Liang , ..., Love Dalén , Yu H
Science - (-) - [2026-10-07]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
DNA-based monitoring uncovers contrasting salinity-driven diversity patterns of bacterial and protist plankton in the Baltic Sea area.
Jurdzinski KT, Latz MA, Torstensson A, ..., Karlson B, Andersson AF
Commun Biol 9 (1) - [2026-10-07; online 2026-10-07]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Ancient DNA study resolves the taxonomic status of the extinct large Palaearctic crane Grus primigenia Milne-Edwards, 1871 (Aves: Gruiformes: Gruidae).
Stewart JR, Rickard R, Hamilton-Dyer S, ..., Ericson PGP, Dalén L
R. Soc. open sci. 13 (10) 260699 [2026-10-07; online 2026-10-28]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Whole-genome 5-hydroxymethylation profiling of human neurons for regulatory and biological insight.
Klose D, Sepehri MH, Olsen RA, ..., Needhamsen M, Jagodic M
Epigenetics Chromatin 19 (1) - [2026-10-05; online 2026-10-05]
NGI Long read [Collaborative] NGI Stockholm (Genomics Applications) [Collaborative] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Ancient genomes reveal an extinct bovine species from mid-latitude Asia.
Oppenheimer J, Gilardet A, Kozlikin MB, ..., Shapiro B, Dalén L
Curr. Biol. - (-) - [2026-10-05; online 2026-10-05]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
A robust multiwell workflow for quantitative and nontargeted chemical exposomics at cohort scale
Thiele S, Bonnefille B, Harlid S, Papazian S, Martin JW
- - (-) - [2026-10-05; online 2026-10-05]
Exposomics [Technology development]
PubMed DOI Crossref
Gene expression profiles in benign prostate tissue reflect tumor proximity, grade, and molecular subtype.
Wikström P, Freyhult E, Semenas J, ..., Bergström SH, Bergh A
J Transl Med 24 (1) - [2026-10-03; online 2026-10-03]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
ThermoTargetMiner as a proteome integral solubility alteration target database for prospective drugs against lung cancer.
Lyu H, Gharibi H, Sokolova B, ..., Saei AA, Zubarev RA
Commun Chem 9 (1) - [2026-10-02; online 2026-10-02]
Chemical Proteomics [Technology development]
PubMed DOI Crossref
Systematic identification of p11 as a signaling modulator across the GPCRome.
Saarinen M, Kotliar IB, Höffkes I, ..., Sakmar TP, Svenningsson P
Sci Adv 12 (40) eaeg6567 [2026-10-02; online 2026-09-30]
CRISPR Functional Genomics [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Methylation profiling reveals epigenetic programs associated with chr18 loss in small intestinal neuroendocrine tumors.
Axling F, Backman S, Hellman P, Norlén O, Stålberg P
Front Oncol 16 (-) 1885499 [2026-10-01; online 2026-10-01]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
18F-CETO in adrenocortical carcinoma: first clinical-translational study of an adrenocortical-targeting PET tracer.
Edholm A, Zhang L, MacFarlane J, ..., Casey RT, Crona J
Endocr. Relat. Cancer 33 (10) - [2026-10-01; online 2026-09-23]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Single-cell study of human ovarian response to phthalate exposure reveals glial cell susceptibility and disruption of adhesion and mitochondrial pathways.
Panagiotou EM, Méar L, Rooda I, ..., Lindskog C, Damdimopoulou P
EBioMedicine 132 (-) 106487 [2026-10-00; online 2026-10-06]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Long-Term Reindeer Exclusion Leads to Higher Carbon Storage and Less Recalcitrant Carbon Compounds in Boreal Forest Soils
Pijcke F, Seitz J, Stark S, ..., Virtanen R, Olofsson J
Ecosystems 29 (5) - [2026-10-00; online 2026-08-18]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Identification of long non-coding RNAs involved in leukemogenesis and venetoclax response in acute myeloid leukemia through functional CRISPR-dCas9 interference screens.
Cozzi E, Neddermeyer A, Miliara S, ..., Lennartsson A, Lehmann S
Noncoding RNA Res 20 (-) 29-43 [2026-10-00; online 2026-06-26]
CRISPR Functional Genomics [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Host-Associated Differentiation in a Parasitoid Wasp Connected to Venom-Related but Not Chemosensory Genes.
Yang X, Fracassetti M, Slotte T, Wheat CW, Hambäck PA
Mol. Ecol. 35 (19) e70589 [2026-10-00; online 2026-10-12]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genomic Medicine Sweden: Advancing precision medicine at the national level.
Edsjö A, Lindstrand A, Baliakas P, ..., Fioretos T, Rosenquist R
J. Intern. Med. 300 (4) 397-419 [2026-10-00; online 2026-07-06]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Technology development] Clinical Genomics Stockholm [Collaborative] Clinical Genomics Uppsala [Collaborative] Clinical Genomics Örebro [Collaborative]
PubMed DOI Crossref
Genome-Wide Association Analysis of Hippocampal Neuroplasticity as an Indicator of Stress Responsiveness in Laying Hens (Gallus gallus domesticus).
Neuert L, Osborne V, Armstrong EA, ..., Baes CF, Makanjuola BO
Anim Genet 57 (5) e70202 [2026-10-00; online 2026-09-10]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Effects of SSRIs on the spatial transcriptome of dorsal raphe serotonin neurons.
Henningson C, Mlost J, Pollak Dorocic I
Mol. Psychiatry 31 (10) 5607-5618 [2026-10-00; online 2026-05-15]
NGI Spatial omics [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Ectomycorrhizal Cortinariaceae species dominate class II peroxidase gene expression in a boreal forest soil.
Barbi F, Menzel U, Simone D, Niskanen T, Lindahl BD
New Phytol. 252 (1) 400-413 [2026-10-00; online 2026-08-13]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Ectomycorrhizal Cortinariaceae species dominate class II peroxidase gene expression in a boreal forest soil
Barbi F, Menzel U, Simone D, Niskanen T, Lindahl BD
New Phytol 252 (1) 400-413 [2026-10-00; online 2026-08-13]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Disturbance History Shapes Microbial Community Assembly and Predictability in a Continuous Culture System.
Renes SE, Bick B, McKie BG, ..., Angeler DG, Lindström ES
Environ. Microbiol. 28 (10) e70430 [2026-10-00; online 2026-09-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Distinct Skin Penetration and Immune Responses to Ionic and Nanoparticulate Cobalt in Allergic Contact Dermatitis.
Werner P, Schaier M, Braun G, ..., Wisgrill L, Fyhrquist N
Allergy 81 (10) 3568-3583 [2026-10-00; online 2026-06-20]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
A unique, non-normative burial of a young adult female from a 17th-century cemetery in Pień, north-central Poland. A multidisciplinary approach
Poliński D, Zagrodzka M, Grzybowski T, ..., Engelgardt P, Czyżewski Ł
Journal of Archaeological Science: Reports 74 (-) 105967 [2026-10-00; online 2026-10-00]
Ancient DNA [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genome assembly and gene annotation of Babesia ovis Israeli strain (Piroplasmida: Babesiidae) using PacBio HiFi sequencing.
Borges Dias G, Albuquerque G, Yngve H, ..., Domingos A, Antunes S
Sci Data 13 (1) - [2026-09-30; online 2026-09-30]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Cell atlas of the developing human meninges reveals a dura-like nature of meningiomas.
Vinsland E, Marco Salas S, Kapustová I, ..., Lönnerberg P, Linnarsson S
Nat Cell Biol - (-) - [2026-09-28; online 2026-09-28]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Multiplexed deep visual proteomics resolves spatial heterogeneity and rare endocrine states in human pancreatic islets.
Mardamshina M, Dorka N, Thielert M, ..., Mann M, Lundberg E
Nat Commun 17 (1) - [2026-09-25; online 2026-09-25]
BioImage Informatics [Collaborative] Bioinformatics (NBIS) [Collaborative]
PubMed DOI Crossref
Active layer microbial inocula restore missing functions across thawed permafrost soils.
Monteux S, Dorrepaal E, Fontaine S, ..., Wild B, Krab EJ
Nat Commun 17 (1) - [2026-09-25; online 2026-09-25]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Species-specific loss of genetic diversity and inbreeding following agricultural intensification.
Nolen ZJ, Jamelska P, Torres Lara AS, Wahlberg N, Runemark A
Genome Biol Evol - (-) - [2026-09-24; online 2026-09-24]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Evolutionary consequences of repeated loss of distyly in Linum.
Postel Z, Zervakis P, Fracassetti M, ..., Humphreys AM, Slotte T
Genome Biol Evol - (-) - [2026-09-24; online 2026-09-24]
NGI Other [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Atlas of cell types and regulatory elements underlying human facial diversity.
Erickson AG, Gershtein Y, Galimullina R, ..., Kharchenko PV, Adameyko I
Nat. Genet. - (-) - [2026-09-24; online 2026-09-24]
NGI Short read [Service] NGI Single cell [Service] NGI Spatial omics NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Molecular mechanism of complement interference by Streptococcus pyogenes nuclease A.
A Bennig I, Ströbaek J, Mamede R, ..., Björck L, Happonen LJ
Commun Biol 9 (1) - [2026-09-23; online 2026-09-23]
Cryo-EM [Service]
PubMed DOI Crossref
A high spatial resolution transcriptomics of tension wood reveals the genetic program of contractile G-layer formation.
Kumar M, Grones C, Allen H, ..., Sundberg B, Mellerowicz EJ
Front Plant Sci 17 (-) 1929884 [2026-09-23; online 2026-09-23]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The spindle-associated antisense RNA ARHGEF17-AS1 functionally contributes to mitotic spindle integrity.
Mahale S, Setia M, Sjövall D, ..., Kanduri M, Kanduri C
Cell Rep 45 (10) 118023 [2026-09-22; online 2026-09-22]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
DOI Crossref
Dorsal ocelli set the luminance-dependent operating state of the bumblebee visual system
Restrepo CE, Araujo P, Mikulovic S, Bauer P, Baird E
- - (-) - [2026-09-21; online 2026-09-21]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Beyond Canonical CO Oxidation: Structural and Evolutionary Insights Into a Non-Canonical Carbon Monoxide Dehydrogenase.
Böhm M, Srinivas V, Wiseman B, ..., Högbom M, Land H
Angew. Chem. Int. Ed. Engl. 65 (39) e1702233 [2026-09-21; online 2026-07-24]
Cryo-EM [Service]
PubMed DOI Crossref
Nitrate transiently rewires transcription in developing xylem of Populus wood to promote cell expansion via CRF4.
Choudhary S, Renström A, Kochakarn TF, ..., Henriksson J, Tuominen H
Plant Cell - (-) - [2026-09-18; online 2026-09-18]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Depth-stratified boreal peatland microbiomes reveal recurring community organization and methane-cycling potential.
Liu T, Smeds J, Nilsson M, Öquist M, Bertilsson S
FEMS Microbiol. Ecol. 102 (10) - [2026-09-18; online 2026-10-01]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Whole genome sequencing reveals a specific microbiota in subglottic stenosis C. acnes may contribute to inflammation.
Erlandsson A, Chorell S, Bäck AT, ..., Haney M, Olofsson K
Eur Arch Otorhinolaryngol - (-) - [2026-09-17; online 2026-09-17]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Post-Hoc Long-Read Sequencing Links Leukemic Mutation Status to Single-Cell Transcriptomes.
Papavasileiou S, Wu C, Boey D, ..., Nilsson G, Dahlin JS
Eur. J. Haematol. - (-) - [2026-09-17; online 2026-09-17]
NGI Long read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A genetic and historical perspective on the origins of keratitis fugax hereditaria.
Immonen AT, Luostarinen SP, Lahermo P, ..., Backlund MP, Turunen JA
Acta Ophthalmol - (-) - [2026-09-16; online 2026-09-16]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Resolving cell lineages and gene functions in the developing mouse gastrointestinal tract using in utero transduction.
Liu Z, Padmanabhan K, He J, ..., Andersson ER, Marklund U
Proc. Natl. Acad. Sci. U.S.A. 123 (37) e2614077123 [2026-09-15; online 2026-09-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Metagenomic sequencing in encephalitis diagnostics: Challenges and opportunities in clinical settings.
Stentoft E, Olausson J, Rudbeck E, Studahl M, Jakobsson HE
PLoS ONE 21 (9) e0358189 [2026-09-15; online 2026-09-15]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Immune remodeling and myeloid signature in the bone marrow niche of MYCN-driven neuroblastoma.
Embaie BT, Alchahin AM, Velentza L, ..., Mei S, Baryawno N
BJC Rep 4 (1) - [2026-09-15; online 2026-09-15]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Accurate characterization of CRISPR-Cas9 genome editing outcomes and mosaicism with near-perfect long reads
Höijer I, van Schendel R, Emmanouilidou A, ..., den Hoed M, Ameur A
Genome Med - (-) - [2026-09-15; online 2026-09-15]
NGI Long read [Technology development] NGI Uppsala (Uppsala Genome Center) [Technology development] National Genomics Infrastructure [Technology development]
PubMed DOI Crossref
Norway spruce spatiotemporal programs of conifer reproductive development.
Saarenpää S, Zivi N, Masarapu Y, ..., Sundström JF, Giacomello S
Cell - (-) - [2026-09-14; online 2026-09-14]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Inferred functional microbiome features are associated with clinical trajectories of low-grade cervical lesions
Stosic M, Molina MA, Mukhedkar D, ..., Wang J, Mühr LSA
BMC Microbiol. 26 (1) - [2026-09-12; online 2026-09-12]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Decreased cerebrospinal fluid TNFRSF8 (sCD30) confirmed as a biomarker of Huntington's disease progression.
Grétarsdóttir HM, Cunningham JL, Rasmusson A, ..., Constantinescu R, Niemelä V
J. Neurol. 273 (10) - [2026-09-12; online 2026-09-12]
NGI Proteomics [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The Effect of Unique Molecular Identifier Family Size Using Tumor-Informed Circulating Tumor DNA Analysis in Childhood Cancers.
Österlund T, Andersson D, Ibrahim RR, ..., Dalin M, Ståhlberg A
J Mol Diagn - (-) - [2026-09-11; online 2026-09-11]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
DOI Crossref
Plasma membrane order maps functional diversity in immune cells
Andronico LA, Gurdap CO, Arora A, ..., Brodin P, Sezgin E
Nat Chem Biol - (-) - [2026-09-09; online 2026-09-09]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
ERGA-BGE chromosome-level genome assembly of the giant stream lacewing Osmylus fulvicephalus (Scopoli, 1763).
Maurstad MF, Kusy D, Undheim EAB, ..., Vinnere Pettersson O, Bortoluzzi C
Open Res Eur 6 (-) 136 [2026-09-09; online 2026-09-09]
NGI Long read [Collaborative] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Cardiomyocyte hypertrophy co-localizes with accumulation of hyaluronan in cMyBPC+/- mice hearts.
Strnadová A, Ericsson M, Nyrén R, ..., Mörner S, Hellman U
PLoS ONE 21 (9) e0342635 [2026-09-09; online 2026-09-09]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Previous malaria exposure attenuates monocyte-driven inflammation and correlates with modulation of the B cell response.
Lautenbach MJ, Xi P, Kleberg L, ..., Färnert A, Sundling C
JCI Insight - (-) - [2026-09-08; online 2026-09-08]
NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Integrating Tumor Targeting and Half-Life Extension into a Dual-Surfaced Single-Domain ADAPT Protein.
Larsson E, Ud-Din M, Bitzios A, ..., Vorobyeva A, Hober S
Mol. Pharm. 23 (9) 4743-4757 [2026-09-07; online 2026-09-07]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
The immigration history and extinction dynamics of the Scandinavian aurochs ( Bos primigenius )
Rosengren E, Rossi C, Magnell O, ..., Sørensen LV, Sinding MHS
The Holocene - (-) - [2026-09-04; online 2026-09-04]
Ancient DNA [Service]
PubMed DOI Crossref
The fitness landscape of a form II rubisco in a photosynthetic bacterium guides engineering of oxygen tolerance.
Hoffmann UA, Knave AF, Schuppe AZ, ..., Syrén PO, Hudson EP
Sci Adv 12 (36) eaee9222 [2026-09-04; online 2026-09-04]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Interplay between the role of DNA methylation in regulating gene expression and TE-silencing in a reptilian methylome.
Hufton J, Husby A, Sengupta M, Olsson M, Lillie M
J. Evol. Biol. - (-) - [2026-09-03; online 2026-09-03]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genomic consequences of admixture in an experimentally founded sand lizard population.
Bracamonte SE, Olsson M, Wapstra E, Lindsay WR, Lillie M
Heredity (Edinb) - (-) - [2026-09-03; online 2026-09-03]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Cancer-Intrinsic Protein Neddylation Modulates the Intratumoral Immune Landscape to Constrain Immune Checkpoint Blockade Therapy.
Papakyriacou I, Lu Y, Jarvius M, ..., Carreras-Puigvert J, Mao Y
Cancer Immunol Res 14 (9) 1467-1483 [2026-09-02; online 2026-06-22]
Chemical Biology Consortium Sweden [Collaborative] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Toward the clinical application of long-read sequencing in repeat-expansion disorders.
Benarroch L, Pešović J, Rossato M, ..., Tomé S, LRS-RED Consortium
Nat. Genet. 58 (9) 2087-2103 [2026-09-00; online 2026-08-20]
NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Risk of venous thromboembolism after SARS-CoV-2 vaccination-Evidence from genome-wide association study and population-based observational study.
Attelind S, Eriksson N, Cavalli M, ..., Wadelius M, Hallberg P
Br J Clin Pharmacol 92 (9) 3246-3256 [2026-09-00; online 2026-05-28]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
RNA degradation by DIS3 is a necessary step in the resolution of backtracked transcription complexes
Enervald E, Jain S, Tarbier M, ..., McHugh T, Visa N
Cell Rep 45 (9) 117886 [2026-09-00; online 2026-09-00]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Protein Biomarkers in Risk and Prognosis of Amyotrophic Lateral Sclerosis.
Pan L, Hou C, Seitz C, ..., Mälarstig A, Fang F
Eur. J. Neurol. 33 (9) e70741 [2026-09-00; online 2026-09-05]
Eukaryotic Single Cell Genomics (ESCG) [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Museum Genomics of an Important Swedish Pollinator Reveals Population Stability Across Time.
Mitschke M, Karlsson E, Suess J, ..., Wheat CW, Díez-Del-Molino D
Mol. Ecol. 35 (18) e70557 [2026-09-00; online 2026-09-23]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Multiple toxigenic and non-toxigenic species coexist in a bloom of the cyanobacterium Microcystis.
Johansson E, McLimans CJ, Manoharan L, ..., Ahrén D, Rengefors K
Harmful Algae 158 (-) 103171 [2026-09-00; online 2026-06-26]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Long-term effects of clear-cutting forestry on ectomycorrhizal fungi in boreal forest.
Lindahl BD, Clemmensen KE, Stendahl J, Dahlberg A
New Phytol. 251 (5) 2818-2831 [2026-09-00; online 2026-04-03]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Lifestyle Impacts the Oral Microbiome of Classical and Post-Classical Societies in Italy.
Farese M, Moraitou M, Jin C, ..., Tafuri MA, Guschanski K
Am J Biol Anthropol 191 (1) e70357 [2026-09-00; online 2026-09-09]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Environmental factors rather than genetics likely drive vitamin D deficiency in idiopathic scoliosis.
Georgopoulos I, Cheng T, Fell D, ..., Schizas N, Gerdhem P
Spine J 26 (9) 1843-1851 [2026-09-00; online 2026-04-23]
Bioinformatics (NBIS) [Service] Bioinformatics Long-term Support WABI [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service] NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Electroconvulsive Treatment for Depression Alters Mitochondrial Serum Metabolites.
Pålsson E, Sigström R, Salehi A, ..., Nordenskjöld A, Landén M
Biol Psychiatry Glob Open Sci 6 (5) 100754 [2026-09-00; online 2026-05-12]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Developmental and MAPK-responsive transcription factors regulate distinct malignant cell states and associated genetic dependencies in pancreatic cancer.
Laise P, Turunen M, Curiel-Garcia A, ..., Olive KP, Califano A
Nat. Genet. 58 (9) 2226-2239 [2026-09-00; online 2026-08-26]
CRISPR Functional Genomics [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
DNA methylation landscape of cerebrospinal fluid cells in multiple sclerosis: an epigenome-wide association study.
Han Y, Zheleznyakova GY, Liang H, ..., Needhamsen M, Jagodic M
EBioMedicine 131 (-) 106454 [2026-09-00; online 2026-08-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Cryo-EM structure of the complex between transglutaminase 2 and the 45 kDa domain of fibronectin.
Heggelund JE, Ali-Ahmad A, Johannesen MK, Sekulić N, Sollid LM
J. Biol. Chem. 302 (9) 113326 [2026-09-00; online 2026-07-13]
Cryo-EM [Service]
PubMed DOI Crossref
Chromatin Accessibility Reveals Adaptive Regulatory Variation in a Keystone Freshwater Fish.
Taube K, Noreikiene K, López ME, Gross R, Vasemägi A
Mol. Ecol. 35 (18) e70550 [2026-09-00; online 2026-09-22]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
An integrated protocol for multiplexed DNA FISH and protein detection in large tissue sections.
O Roberts EM, Panshikar P, Li Wang X, ..., Bienko M, Stadler C
J Histotechnol 49 (3) 199-215 [2026-09-00; online 2026-07-24]
BioImage Informatics [Collaborative] Bioinformatics (NBIS) [Collaborative] Spatial Proteomics [Technology development]
PubMed DOI Crossref
A Genetic Tool for Non-Invasive Monitoring of Fennoscandian Golden Eagles (Aquila chrysaetos).
Lindberg B, Kleven O, Kvist L, ..., Singh NJ, Spong G
Ecol Evol 16 (9) e74386 [2026-09-00; online 2026-09-20]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Mixed-Mode On-Line SPE-LC Broadens Analytical Coverage for Non-Target Discovery of Mobile Chemicals in Water
Rian MB, Bonnefille B, Sunyer-Caldú A, Martin JW
- - (-) - [2026-08-31; online 2026-08-31]
Exposomics [Technology development]
PubMed DOI Crossref
Genomic characterization of ER-positive primary tumors and corresponding relapses identifies potentially targetable alterations.
Schagerholm Stanev C, Robertson S, Toosi H, ..., Lagergren J, Hartman J
NPJ Breast Cancer 12 (1) - [2026-08-30; online 2026-08-30]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Differential aggregation properties among Baltic Sea picocyanobacterial strains impact their export.
Ekman M, Viinimäki E, Svensson A, ..., Walve J, Foster RA
ISME J - (-) - [2026-08-27; online 2026-08-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Circulating Cell-Free RNA Reflects Immune-Associated and Airway Remodeling Signatures in Equine Asthma.
Zhang B, Agdour H, Riihimäki M, Hansen S, Raine A
J Immunol Res 2026 (1) e5310284 [2026-08-26; online 2026-08-26]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
MicroRNA profiles of prostate cancer bone metastases and miR-375 as an inhibitor of the aggressive metastasis subtype MetB.
Järemo H, Semenas J, Halin Bergström S, ..., Brattsand M, Wikström P
Sci Rep 16 (1) - [2026-08-25; online 2026-08-25]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
High-Throughput Sequencing Study of the Mycobiota of Barley Grain Collected in Northern and Central Italy and Accumulation of Fungal Secondary Metabolites.
Covarelli L, Beccari G, Balducci E, ..., Montanari M, Tini F
Toxins (Basel) 18 (9) - [2026-08-25; online 2026-08-25]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A Dual-Halogen Labeling Strategy to Detect and Quantify Double-Stranded RNAs Using NanoSIMS: A Proof-of-Concept Study
Vicentini Q, Kurczy M, Estupiñán HY, ..., El-Andaloussi S, Dahlén A
ACS Omega 11 (33) 49739-49745 [2026-08-25; online 2026-08-14]
NanoSIMS [Service]
PubMed DOI Crossref
A host-centric morphological profiling approach to identify repurposed antiviral drugs.
Asp E, Rietdijk J, Tampere M, ..., Spjuth O, Östling P
iScience 29 (8) 116673 [2026-08-21; online 2026-07-10]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
High-Ratio Partial Proteolysis with Carrier Proteome (HOLSER) Enables Global Structure Profiling and Site-Resolved Elucidation of Ligand-Protein Interactions.
Zhang X, Gharibi H, Sokolova B, ..., Gaetani M, Zubarev RA
Anal. Chem. 98 (32) 23939-23948 [2026-08-18; online 2026-08-18]
Chemical Proteomics [Technology development]
PubMed DOI Crossref
Paleogenomic sex inference of mammoth remains sheds light on the anthropogenic nature of bone accumulations.
Moots HM, Larsdotter J, Oteo-García G, ..., Dalén L, Díez-Del-Molino D
Curr. Biol. 36 (16) 4233-4242.e4 [2026-08-17; online 2026-07-30]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Effects of RIM15 deletion on yeast adaptation to synthetic spruce hydrolysate.
Vilela N, Trivellin C, T Pianale L, ..., Trancart S, Olsson L
Microb. Cell Fact. 25 (1) - [2026-08-15; online 2026-08-15]
Bioinformatics (NBIS) [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Dysregulated lncRNAs are associated with the progressive arterial phenotype in Hutchinson-Gilford Progeria Syndrome.
Merino LG, Subhash S, Whisenant D, ..., Revêchon G, Eriksson M
Geroscience - (-) - [2026-08-15; online 2026-08-15]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Tissue-reactive zonation of mesenchymal-like phenotypes in human glioblastoma.
Mossi Albiach A, Janusauskas J, Kjaer Jacobsen J, ..., Persson O, Linnarsson S
Med 7 (8) 101228 [2026-08-14; online 2026-07-23]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
3D chromatin organisation contributes to the regulatory logic in differentiating lymphatic endothelium.
Panara V, Arnold H, Gloger M, ..., Smialowska A, Koltowska K
EMBO Rep. - (-) - [2026-08-14; online 2026-08-14]
NGI Other [Service] NGI Short read [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Species Dynamics and Gene Expression in Algal Polycultures Under Mixotrophic Cultivation in Outdoor Pilot-Scale Nordic Conditions.
Nham Q, Farnelid H, Legrand C, Lindehoff E
Biotechnol. Bioeng. - (-) - [2026-08-12; online 2026-08-12]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Integrating GlycoSHIELD Modeling and DNA-PAINT SMLM to Map the Glycosylation-Dependent Distribution of the Na,K-ATPase.
Stojcic B, Draczkowski P, Patrick J, Saeed M, Brismar H
J Membr Biol 259 (1) - [2026-08-12; online 2026-08-12]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Structure of NHE6 and its lipid-mediated interactions regulating endosomal pH.
Jung S, Yeo H, Li H, ..., Fuster DG, Drew D
Nat Commun 17 (1) - [2026-08-11; online 2026-08-11]
Cryo-EM [Service]
PubMed DOI Crossref
Structural characterization of ribosome recycling and fusidic acid inhibition in Staphylococcus aureus.
González-López A, Selmer M
Nucleic Acids Res. 54 (15) - [2026-08-10; online 2026-08-10]
Cryo-EM [Service]
PubMed DOI Crossref
Correction: Trimerization of CD40L-specific affibody molecules using collagen domains enhances target binding and CD40 blockade.
Westerberg C, Sorini C, Al-Haddad M, ..., Jagodic M, Löfblom J
Cell. Mol. Life Sci. 83 (1) - [2026-08-10; online 2026-08-10]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Cancer-associated KBTBD4 mutations induce differentiation defects and confer a unique therapeutic vulnerability
Sivaprasad R, Žemaitis K, Linfeldt D, ..., Hansson J, Subramaniam A
Cancer Gene Ther - (-) - [2026-08-10; online 2026-08-10]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
23S rRNA modifications stimulate catalytic activity and prevent the formation of alternative structures.
Larsson DSD, Liiv A, Ero R, Remme J, Selmer M
Nucleic Acids Res. 54 (15) - [2026-08-10; online 2026-08-14]
Cryo-EM [Service]
PubMed DOI Crossref
Genome-wide association study of image-based emphysema scoring in the Swedish CArdioPulmonary bioImage Study (SCAPIS) suggests two new risk loci in smokers.
Nyberg F, Lundmark P, Blomberg A, ..., Vanfleteren LEGW, Fall T
Respir. Res. 27 (1) - [2026-08-08; online 2026-08-08]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Tissue-stiffness–driven platelet activation emerges as a potential target for breast cancer prevention and treatment
Heenkenda MK, Wang X, Zhong W, ..., Lindahl TL, Dabrosin C
Cell Commun Signal 24 (1) - [2026-08-06; online 2026-08-06]
NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Spectral biophysical cytometry with nanosensors reveals remodelling of immune cells in atherosclerosis.
Gurdap CO, Aydos D, Andronico LA, ..., Bitirim VC, Sezgin E
Nat Nanotechnol - (-) - [2026-08-06; online 2026-08-06]
Integrated Microscopy Technologies Stockholm [Service]
DOI Crossref
Perturbation of epithelial and limbal stem cell identity in a mouse model of pathologic corneal neovascularization
Abbasi M, Javidjam D, Arts JA, ..., Zhou H, Lagali N
Commun Biol - (-) - [2026-08-06; online 2026-08-06]
Clinical Genomics [Service] Clinical Genomics Linköping [Service]
PubMed DOI Crossref
Human growth plates house resting zone sub-populations with features of quiescent stem cells.
Avijgan M, López-Pérez AR, Galicia LA, ..., Gomez-Cabrero D, Newton PT
Bone Res 14 (1) - [2026-08-05; online 2026-08-05]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A pcyt-1 allelic series reveals in vivo consequences of reduced phosphatidylcholine synthesis in C. elegans.
Qvist A, Kaper D, Henricsson M, ..., Borén J, Pilon M
G3 (Bethesda) 16 (8) - [2026-08-05; online 2026-07-04]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Functional profiling of ovarian cancer models reveals Bcl-xL/NOTCH targeting to overcome resistance
Gudoityte G, Berkovska O, Orre LM, ..., Joneborg U, Seashore-Ludlow B
NPJ Precis Oncol 10 (1) - [2026-08-04; online 2026-08-04]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
GLUD1 Inhibition Disrupts Glutamate Homeostasis and Induces Metabolic and Redox Stress in Gliomas.
Trybula M, Łysiak M, Wiechec E, Malmström A, Söderkvist P
Cells 15 (15) - [2026-08-03; online 2026-08-03]
Clinical Genomics [Service] Clinical Genomics Linköping [Service]
PubMed DOI Crossref
Selective Regimes and Evolutionary Dynamics of Z and W Gametologs Across an Expanded Avian Neo-Sex Chromosome.
Ellerstrand SJ, Hansson B
Genome Biol Evol 18 (8) - [2026-08-01; online 2026-08-10]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Methylation and polygenic risk scores capture different features of Systemic Lupus Erythematosus.
Vestin H, Oparina N, Eloranta ML, ..., Imgenberg-Kreuz J, Leonard D
Rheumatology (Oxford) 65 (8) - [2026-08-01; online 2026-07-11]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
The significance of tree retention on fungal communities and below‐ground stocks 12 years after harvest of boreal forest
Gangiah TK, Clemmensen KE, Dahlberg A, Lindahl BD
Journal of Applied Ecology 63 (8) - [2026-08-00; online 2026-08-08]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Development and analytical validation of a targeted short-read next generation sequencing-based pharmacogenetic panel for comprehensive variant detection.
Gréen A, Fredriksson NJ, Andresen M, ..., Appell ML, Gréen H
British Journal of Pharmacology 183 (16) 4735-4760 [2026-08-00; online 2026-05-05]
Clinical Genomics [Technology development] Clinical Genomics Örebro [Technology development] NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Demonstration of Simple and Efficient Improvement of Fire Behaviour of Upholstered Furniture Through Experiments
Amiri R, Larsson A, Steen‐Hansen A, Patra A
Fire and Materials 50 (5) 479-498 [2026-08-00; online 2026-03-19]
Swedish NMR Centre [Service]
DOI Crossref
Calcium as a molecular switch: Gentle antibody-purification through directed evolution of Protein G
Jönsson M, Hamnqvist D, Dieminger N, ..., Wolf-Watz M, Hober S
Separation and Purification Technology 398 (-) 138115 [2026-08-00; online 2026-08-00]
Swedish NMR Centre [Service]
DOI Crossref
Biogas digestate and wood ash as fertiliser replacements - effects on crops and soil microbial communities
Dahlin AS, Lindahl B, Affholder MC
Heliyon 12 (13) e45216 [2026-08-00; online 2026-08-00]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A single-cell multi-omic atlas of the human pancreas reveals potential for cellular plasticity across development, health, and disease
Mereu E, Balboa D, Liebig J, ..., Conrad C, Eils R
Cell Metabolism - (-) - [2026-08-00; online 2026-08-00]
Spatial Proteomics [Service]
PubMed DOI Crossref
Transcriptomic and RNAi-mediated antiviral response to Kamiti River virus infection in Aedes albopictus U4.4 cells.
Öhlund P, Pinto MC, Blomström AL
Sci Rep 16 (1) - [2026-07-31; online 2026-07-31]
NGI Short read [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
AI-driven discovery and validation of a GIPC1 PDZ domain inhibitor for pancreatic ductal adenocarcinoma.
Rachamala HK, Rao Nakka NM, Angom RS, ..., Pal K, Mukhopadhyay D
Cell Rep - (-) 117777 [2026-07-31; online 2026-07-31]
Chemical Proteomics [Collaborative]
PubMed DOI Crossref
Metagenomic and cultivation-based description of a syntrophic butyrate-oxidizing bacterium from a thermophilic and high-ammonia biogas process.
Tiefensee M, Weng N, Ohlsson JA, Westerholm M
BMC Microbiol. 26 (1) - [2026-07-30; online 2026-07-30]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Integrated multiomic profiling reveals 2 distinct splenic marginal zone lymphoma subgroups with prognostic relevance.
Parker H, Mirandari A, Stevens B, ..., Bryant D, Strefford JC
Blood Adv 10 (14) 4943-4957 [2026-07-28; online 2026-05-27]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Unheralded high MHC class II polymorphism in the abundant Atlantic herring resolved by long-read sequencing.
Jamsandekar M, Mohamadnejad Sangdehi F, Berg F, ..., Pettersson ME, Andersson L
Sci Adv 12 (30) eaea2862 [2026-07-24; online 2026-07-24]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Widespread variants of the highly polymorphic Plasmodium falciparum vaccine candidate antigen MSP2 across Sub-Saharan Africa.
Zerebinski J, Broumou I, Kimenyi KM, ..., Plaza DF, Färnert A
J. Infect. Dis. - (-) - [2026-07-22; online 2026-07-22]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Pathogenic POLRMT variants in mice impair mtDNA transcription and affect perinatal survival
Alsina D, Rubalcava-Gracia D, Bubb K, ..., Koolmeister C, Larsson NG
JCI Insight 11 (14) - [2026-07-22; online 2026-07-22]
CRISPR Functional Genomics [Service] NGI Short read NGI Stockholm (Genomics Production) National Genomics Infrastructure
PubMed DOI Crossref
Docking of virtual libraries identifies small-molecule agonists of neurotensin receptors with analgesic activity.
Panel N, Vo DD, Hübner H, ..., Gmeiner P, Carlsson J
Nat Commun 17 (1) - [2026-07-22; online 2026-07-22]
Drug Discovery and Development [Service]
PubMed DOI Crossref
Synthetic cannabinoid receptor agonists inhibit the cardiac voltage-gated potassium channel hERG.
Ottosson NE, Frampton DJA, Pipatpolkai T, ..., Gréen H, Liin SI
Acta Pharmacol Sin - (-) - [2026-07-21; online 2026-07-21]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
MGF110-2L deletion prevents IFN-I and inflammatory response, resulting in partial attenuation and protection against virulent ASFV.
Gata-de-Benito J, Walczak M, Liu L, ..., Revilla Y, Pérez-Núñez D
J. Virol. 100 (7) e0063626 [2026-07-21; online 2026-06-26]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Advancing FAIR data towards comparable, organized, predictive AI-ready data for community validation.
Wood-Charlson EM, Åkerström WN, Anderson L, ..., Van Den Bossche T, Arkin AP
Commun Biol 9 (1) - [2026-07-18; online 2026-07-18]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Inversions support both parallel and location-specific adaptations in snail ecotypes.
Pajot B, Broquet T, Choo LQ, ..., Johannesson K, Le Moan A
J. Evol. Biol. - (-) - [2026-07-17; online 2026-07-17]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Blood-Based DNA Methylation Models Improve Short-term Cardiovascular Risk Stratification in Individuals With Type 2 Diabetes.
Longo M, Desiderio A, Masulli M, ..., Beguinot F, Raciti GA
Diabetes Care - (-) - [2026-07-16; online 2026-07-16]
Clinical Genomics [Collaborative] Clinical Genomics Linköping [Collaborative]
PubMed DOI Crossref
Body mass index during childhood and puberty: associations with blood pressure and hypertension.
Lilja L, Bygdell M, Martikainen J, ..., Ohlsson C, Kindblom JM
Eur J Prev Cardiol 33 (9) 1655-1662 [2026-07-14; online 2025-06-25]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Pan-disease blood protein profiles of rheumatic autoimmune diseases.
Kenrick J, Preger C, Álvez MB, ..., Edfors F, Pin E
Commun Med (Lond) 6 (1) - [2026-07-13; online 2026-07-13]
PubMed DOI Crossref
Ancestry, admixture, and pathogens in contemporaneous Neolithic farmers and foragers on the Island of Gotland.
Fraser M, Sanchez-Quinto F, Kırdök E, ..., Storå J, Jakobsson M
Commun Biol 9 (1) - [2026-07-13; online 2026-07-13]
Ancient DNA [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Equal in death: Ancient genomic analysis of children's early Christian burials.
Krzewińska M, Kjellström A, Yaka R, ..., Storå J, Götherström A
Sci Adv 12 (28) eaeb8588 [2026-07-10; online 2026-07-10]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Comparative genomics and transcriptomics of rough and smooth Mycobacterium marinum focusing on ESX-1, ESX-6 and LOS genes.
Behra PRK, Ramesh M, Pettersson BMF, Kirsebom LA
Sci Rep 16 (1) - [2026-07-10; online 2026-07-10]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Complement receptor 2 downregulation is associated with mortality in Staphylococcus aureus sepsis in both mice and humans.
Kopparapu PK, Deshmukh M, Subhash S, ..., Grimsholm O, Jin T
Front Immunol 17 (-) 1724049 [2026-07-09; online 2026-07-09]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
PubMed DOI Crossref
Phylogeny-aware comparative genomics of Vibrio vulnificus links genetic traits to pathogenicity.
Delgado LF, Riedinger DJ, Fernández-Juárez V, ..., Labrenz M, Andersson AF
MBio 17 (7) e0020526 [2026-07-08; online 2026-06-17]
NGI Short read [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Environmental Gradients Shape the Distribution of Free-Living and Host-Associated Syndiniales Life Stages.
Hanström N, Jan KMG, Winder M
Microb. Ecol. 89 (1) - [2026-07-08; online 2026-07-08]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Fibroblast-driven collagen expansion and altered thymic medullary niches in 22q11.2 deletion syndrome.
Hennings V, Lingman Framme J, Thörn K, ..., Björklund Å, Ekwall O
J Hum Immun 2 (4) e20260011 [2026-07-06; online 2026-05-04]
NGI Spatial omics [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service] Spatial Proteomics [Service]
DOI Crossref
Bacterial membrane vesicles as effective immunotherapeutic agents in melanoma, colon, and breast cancer
Lötvall J, Ordouzadeh N, Park KS
Extracell Vesicles Circ Nucleic Acids. 7 (3) 1043-55 [2026-07-06; online 2026-07-06]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Evolutionary dynamics of enlarged neo-sex chromosomes and novel pseudoautosomal regions in Sylvioidea songbirds.
Sigeman H, Ellerstrand SJ, Hansson B
Commun Biol 9 (1) - [2026-07-04; online 2026-07-04]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Direct visualization of Na,K-ATPase clustering by 3D DNA-PAINT MINFLUX nanoscopy
Stojcic B, Agostinho A, Panconi L, Blom H, Brismar H
- - (-) - [2026-07-03; online 2026-07-03]
Integrated Microscopy Technologies Stockholm [Collaborative]
PubMed DOI Crossref
Ribosome dynamics during skeletal muscle repair and regeneration in mice and humans
Cui M, Edman S, Jude B, ..., Schilcher J, von Walden F
Am. J. Physiol., Cell Physiol. 331 (1) C30-C40 [2026-07-01; online 2026-07-01]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Mechanistic insights into graphene coatings for oral biofilm inhibition and osteoblast compatibility.
Chen X, Zhang J, Rahimi S, ..., Mijakovic I, Pandit S
J Mater Chem B 14 (25) 7784-7796 [2026-07-01; online 2026-07-01]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Comparison of library preparation protocols and bioinformatic pipelines in high-throughput 16S rRNA gene sequencing.
Andersson O, Fagerström A, Dannenberg K, ..., Lindqvist CM, Stenmark B
BMC Microbiol. 26 (1) - [2026-07-01; online 2026-07-01]
Clinical Genomics [Technology development] Clinical Genomics Örebro [Technology development]
PubMed DOI Crossref
A carboxylate switch point controls long-range energy transduction in respiratory Complex I.
Beghiah A, Saura P, Kovalova T, ..., Friedrich T, Kaila VRI
Nat Commun 17 (1) - [2026-07-01; online 2026-07-01]
Cryo-EM [Service]
PubMed DOI Crossref
When the proteome meets the metabolome observational and Mendelian randomization analyses.
Zheng R, Delgado-Velandia M, Ärnlöv J, ..., Fall T, Lind L
Metabolism 180 (-) 156602 [2026-07-00; online 2026-04-08]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Using Nuclear Genomic Data to Address Intractable Relationships and Gene Tree Discordance in an Ancient Group of Gymnosperms (Ephedra, Gnetales).
Blokzijl R, Rydin C
Ecol Evol 16 (7) e73863 [2026-07-00; online 2026-06-30]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Standardized workflow enables reproducibility of drug synergism detection: Results from a multi-center in vitro ring test on complex drug combinations in pancreatic cancer models.
Barile V, Kuzikov M, Cui W, ..., Seashore-Ludlow B, Budillon A
Biomed Pharmacother 200 (-) 119575 [2026-07-00; online 2026-06-01]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Paleogenomes reveal the evolutionary relationship between modern and cave lions
Stanton DWG, Bergström A, Heintzman PD, ..., Frantz L, Dalén L
Cell 189 (14) 4425-4436.e11 [2026-07-00; online 2026-07-00]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Machine learning based multi-omics analysis reveals key molecular determinants of Parkinson's disease severity.
Jin H, Meng L, Yulug B, ..., Uhlén M, Mardinoglu A
Neurobiol. Dis. 225 (-) 107424 [2026-07-00; online 2026-04-30]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Loss of hepatocyte PI3Kα reduces hepatocellular carcinoma and hepatocyte proliferation in association with altered lipid metabolism.
Becattini B, Sardi C, Edelbroek B, ..., Helou K, Solinas G
JHEP Rep 8 (7) 101847 [2026-07-00; online 2026-04-15]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
PubMed DOI Crossref
Homothallic or Heterothallic? A Genomic Investigation Into the Sexual Capabilities of the Ascomycete Fungus Clonostachys rosea.
Manyara D, Wilson AM, Piombo E, ..., Dubey M, Karlsson M
Mol. Ecol. 35 (14) e70486 [2026-07-00; online 2026-07-25]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
GloBIAS: strengthening the foundations of bioimage analysis.
Corbat AA, Walther CG, de la Ballina LR, ..., Cimini BA, Haase R
Nat. Methods 23 (7) 1259-1260 [2026-07-00; online 2026-04-23]
BioImage Informatics [Collaborative] Bioinformatics (NBIS) [Collaborative]
PubMed DOI Crossref
Genetic diversity of late Neanderthals in northwestern Europe.
Bossoms Mesa A, Essel E, Peyrégne S, ..., Peter BM, Hajdinjak M
Nature 655 (8122) 409-417 [2026-07-00; online 2026-06-24]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Exploratory analysis of cfDNA fragmentomic patterns in a prospective cancer diagnostic cohort reveals limited discriminatory performance despite cancer-associated alterations
Adolfsson E, Ismail Z, Carlsson J, ..., Lindqvist CM, Qvick A
Precision Pathology 1 (2) 100011 [2026-07-00; online 2026-07-00]
Clinical Genomics [Technology development] Clinical Genomics Örebro [Technology development]
PubMed DOI Crossref
Drugs that act on both G protein-coupled receptors (GPCRs) and kinases: potentiation of effects, side effects and general aspects of drug pleiotropy.
Ljunggren H, Sokolov A, Ballante F, ..., Jonsson J, Schiöth HB
British Journal of Pharmacology 183 (13) 3471-3483 [2026-07-00; online 2026-05-10]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Common Chiffchaffs (Phylloscopus collybita) Diverge in a Genomic Region Associated With Migration Differences in Willow Warblers (Phylloscopus trochilus).
Caballero-Lopez V, Mackintosh A, Ekman D, ..., Jankowiak Ł, Bensch S
Mol. Ecol. 35 (13) e70462 [2026-07-00; online 2026-07-09]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Blood DNA methylation and breast cancer risk: a prospective nested case-control study.
Rodriguez J, Grassmann F, Kaukonen D, ..., Hall P, Czene K
EBioMedicine 129 (-) 106352 [2026-07-00; online 2026-06-25]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
BeeGees: A High-Throughput Protein-Coding DNA Barcode Recovery Pipeline Tailored for Genome Skims of Museum Specimens.
Parsons DAJ, Vos RA, Price BW
Mol Ecol Resour 26 (5) e70170 [2026-07-00; online 2026-06-19]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Asthma in Young Adults at High Risk for Allergies Is Traced Back to Immune and Microbiota Signatures in Early Childhood.
de Jong YA, Badolati I, Hellberg U, ..., Nilsson C, Sverremark-Ekström E
Clin Exp Allergy 56 (7) 826-829 [2026-07-00; online 2026-03-13]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Impact of kidney function on the metabolome in the general population.
Ljunggren J, Delgado-Velandia M, Sundström J, ..., Lind L, Svensson MK
PLoS ONE 21 (6) e0347652 [2026-06-30; online 2026-06-30]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
FN-silk membrane enables alveologenesis processes and self-organization of the H441 epithelial cell line into native-like alveolar morphology.
Gkouma S, Påvenius L, Gustafsson L, ..., Palmberg L, Hedhammar M
Sci Rep 16 (1) - [2026-06-27; online 2026-06-27]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Light-based footprinting of a eukaryotic genome.
Ögren L, Muylaert I, Elliott K, Larsson E
Sci Adv 12 (26) eaec0059 [2026-06-26; online 2026-06-24]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
PubMed DOI Crossref
Metformin inhibits small intestinal neuroendocrine tumor growth in vivo
Axling F, Backman S, Hellman P, ..., Barazeghi E, Stålberg P
BMC Cancer 26 (1) - [2026-06-25; online 2026-06-25]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
MalDeepSeq panel: A targeted ultra-deep sequencing approach to trace drug resistance markers in Plasmodium falciparum.
Salazar YEAR, Rezende AM, Puça MCSB, ..., de Sousa TN, Gil JP
Cell Reports Methods - (-) 101509 [2026-06-25; online 2026-06-25]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Evaluating neoantigen-vaccine responses through mechanistic and model-based frameworks.
Ibrahim EIK, Laurén I, Veerman RE, ..., Mangsbo SM, Friberg LE
NPJ Precis Oncol 10 (1) - [2026-06-24; online 2026-06-24]
Drug Discovery and Development [Collaborative]
DOI Crossref
Lipid packing contributes to the confinement of caveolae to the plasma membrane
Larsson E, Kabedev A, Pace H, ..., Bally M, Lundmark R
- - (-) - [2026-06-22; online 2026-06-22]
Integrated Microscopy Technologies Umeå [Service]
DOI Crossref
Librarian: An Open-Access Web Application for High-Resolution Mass Spectral Library Assembly
Ahlberg Weidenfors J, Bonnefille B, Papazian S
Metabolites 16 (6) 433 [2026-06-22; online 2026-06-22]
Exposomics [Technology development]
PubMed DOI Crossref
Clonal hematopoiesis of indeterminate potential in high grade B-cell lymphomas: clinicobiological associations and further insight with single-cell multiomics analysis.
Hesselager C, Hollander P, Pettersson E, ..., Baliakas P, Amini RM
Blood Cancer J 16 (1) - [2026-06-20; online 2026-06-20]
Clinical Genomics [Collaborative] Clinical Genomics Uppsala [Collaborative]
PubMed DOI Crossref
Multi-Year Biofilm Formation on Granitic Surfaces Reveals Dynamic Microbial Communities in Fennoscandian Shield Deep Groundwaters.
Ståhle M, Johnson A, Turner S, ..., Kalinowski B, Dopson M
Microb. Ecol. 89 (1) - [2026-06-19; online 2026-06-19]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Live bacteria nitrogen uptake in response to winter warming in dry Arctic heath
Rütting L, Rodas S, Rasmussen L, ..., Arellano-Caicedo C, Hammer E
- - (-) - [2026-06-18; online 2026-06-18]
Integrated Microscopy Technologies Gothenburg [Technology development]
PubMed DOI Crossref
Developmentally dynamic, non-convergent transcriptomic profiles in CNV models for schizophrenia risk.
French H, Yao S, Bast L, ..., Sullivan PF, Hjerling-Leffler J
Mol. Psychiatry - (-) - [2026-06-18; online 2026-06-18]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Targeting oncogenic TβRI signaling inhibits androgen-independent prostate cancer growth and metastasis.
Flodbring Larsson P, Schmidt A, Mu Y, ..., Heldin CH, Landström M
Signal Transduct Target Ther 11 (1) - [2026-06-17; online 2026-06-17]
Drug Discovery and Development [Service]
PubMed DOI Crossref
Deep learning-enabled discovery of antibiotics effective against Neisseria gonorrhoeae.
Anahtar MN, Valeri JA, Modaresi SM, ..., Ingber DE, Collins JJ
Sci Transl Med 18 (854) eads4699 [2026-06-17; online 2026-06-17]
Chemical Proteomics [Collaborative]
PubMed DOI Crossref
Single-cell transcriptomics reveals rapid divergence of genes guiding meiosis and spermiogenesis in two passerine birds.
Segami JC, Sémon M, Cunha C, ..., Mugal CF, Qvarnström A
Genome Res. - (-) - [2026-06-16; online 2026-06-16]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Correlating Molecule Counts with Stress Granule Size Using Novel Platinized Carbon Nanopore Electrodes.
Wang Y, Gu C, Gu H, ..., Wang D, Ewing AG
Anal. Chem. 98 (23) 17153-17160 [2026-06-16; online 2026-06-02]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Comparative genomics reveal signatures of ecological specialization in the striped ambrosia beetle Trypodendron lineatum.
Montes-Ortiz Z, Powell D, Vogel H, Löfstedt C, Andersson MN
BMC Genomics 27 (1) - [2026-06-16; online 2026-06-16]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Structural basis for activation and potentiation in a human α5β3 GABAA receptor.
Cowgill J, Fan C, Steyaert J, Howard RJ, Lindahl E
Nat Commun 17 (1) - [2026-06-15; online 2026-06-15]
Cryo-EM [Service]
PubMed DOI Crossref
A comparison of ancient DNA yields across ossicles and the petrous bone reveals the best preservation in the stapes and incus.
Sağlıcan E, Sevkar A, Kazancı DD, ..., Erdal YS, Somel M
Genome Res. - (-) - [2026-06-11; online 2026-06-11]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genomic Catastrophe Defines the Evolutionary Trajectory of Adrenocortical Carcinoma.
Backman S, Axling F, Zhang L, ..., Crona J, Åkerström T
Endocr. Pathol. 37 (1) - [2026-06-10; online 2026-06-10]
NGI SNP genotyping [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
ERGA-BGE reference genome of the Mediterranean monk seal ( Monachus monachus), an IUCN Vulnerable species.
Manousaki T, Dendrinos P, Vasileiadou K, ..., Vinnere Pettersson O, Bortoluzzi C
Open Res Eur 6 (-) 195 [2026-06-09; online 2026-06-09]
NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
NK cell cytotoxicity is transiently enhanced during acute malaria and modulated by the host microenvironment.
Xi P, Sandoz PA, Lautenbach MJ, ..., Hammer Q, Sundling C
JCI Insight 11 (11) - [2026-06-08; online 2026-04-21]
NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Engineering a conditionally active cetuximab prodrug via affibody-based paratope masking.
Mestre Borras A, Mehari H, Bitzios A, ..., Vorobyeva A, Löfblom J
J Biol Eng 20 (1) - [2026-06-08; online 2026-06-08]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Disrupting Notch signalling by a small molecule inhibiting dihydroorotate dehydrogenase activity
Braune EB, Wienke D, Seshire A, ..., Lain S, Lendahl U
Sci Rep 16 (1) - [2026-06-06; online 2026-06-06]
Chemical Biology Consortium Sweden [Collaborative]
DOI Crossref
Plattfota säljägare från stenålderns Gotland – tecken på nära släktskap?
Arcini CA, Ahlström T, Lundgren M
FORNVANNEN 121 (2) 141-147 [2026-06-05; online 2026-06-05]
Ancient DNA [Service]
DOI Crossref
Immobilization in nanocellulose matrix reallocates cyanobacterial proteome resources from growth to bioproduction
Lupacchini S, Sporre E, Attallah NL, ..., Hudson EP, Guccini V
- - (-) - [2026-06-05; online 2026-06-05]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Breed-specific divergence in boar sperm regulatory profiles involves piRNA and mitochondrial small RNAs.
Asratian A, Isacson S, Kugelberg U, Walsh CP, Öst A
Cell. Mol. Life Sci. 83 (1) - [2026-06-04; online 2026-06-04]
Clinical Genomics [Service] Clinical Genomics Linköping [Collaborative]
PubMed DOI Crossref
Revisiting the African mtDNA landscape through complete mitochondrial genomes.
Lankheet I, Chowdhury A, Tellgren-Roth C, ..., Malmström H, Schlebusch CM
Commun Biol 9 (1) - [2026-06-03; online 2026-06-03]
NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Adrenal-derived factors drive progression of sclerotic prostate cancer in bone.
Hagberg Thulin M, Li L, Abrahamsson S, ..., Ohlsson C, Poutanen M
Endocr. Relat. Cancer 33 (6) - [2026-06-01; online 2026-06-09]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Whole-genome sequencing with AVITI and NovaSeq X Plus reveals comparable performance with contextual biases.
Höjer P, Alneberg J, Lundin P, ..., Nordlund J, Månsson Welinder R
NAR Genom Bioinform 8 (2) lqag053 [2026-06-00; online 2026-05-26]
NGI Long read [Collaborative] NGI Stockholm (Genomics Applications) [Technology development] NGI Stockholm (Genomics Production) [Technology development] NGI Uppsala (SNP&SEQ Technology Platform) [Technology development] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
The Fungal Community of a High-Arctic Semi-Desert Ecosystem Is Robust to Two Decades of Doubled Summer Precipitation but Influenced by Plant Dominance.
Harder CB, Michelsen A, Castaño C, Clemmensen KE
Mol. Ecol. 35 (12) e70440 [2026-06-00; online 2026-06-27]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Targeted Delivery of mRNA to the Heart via Extracellular Vesicles or Lipid Nanoparticles.
Nawaz M, Tangruksa B, Heydarkhan-Hagvall S, ..., Synnergren J, Valadi H
J Extracell Vesicles 15 (6) e70324 [2026-06-00; online 2026-06-11]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Studying Macromolecular Composition in Cell–Cell Interfaces Using 3D Membrane Reconstitution Systems
Ragaller F, Schneider AM, Sjule E, ..., Achour A, Sezgin E
Adv Sci (Weinh) 13 (31) e22443 [2026-06-00; online 2026-03-24]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Spatiotemporal analysis reveals distinct inflammatory programs underlying chronic colitis
Fransson J, Sorini C, Castillo F, ..., Smith P, Villablanca EJ
Immunity 59 (6) 1599-1615.e5 [2026-06-00; online 2026-06-00]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Single-cell RNA-seq reveals a persistent interferon signature in immune cells from systemic lupus erythematosus patients with high versus low polygenic risk scores despite antimalarial treatment.
Sayadi A, Eloranta ML, Oparina N, ..., Rönnblom L, Leonard D
J. Autoimmun. 161 (-) 103575 [2026-06-00; online 2026-05-12]
NGI SNP genotyping [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Characterisation of Encephalitozoon cuniculi α-actinin.
Sandblad L, Backman L
Mol Biochem Parasitol 266 (-) 111738 [2026-06-00; online 2026-02-21]
Cryo-EM [Collaborative]
PubMed DOI Crossref
An exploratory study of environmental and nutritional determinants of early-stage clonal hematopoiesis in the elderly.
Österroos A, Salihovic S, Mathot L, ..., Lind L, Lehmann S
Environ Int 212 (-) 110300 [2026-06-00; online 2026-05-12]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
USP18 Impacts Cisplatin Resistance in Ovarian Cancer Cells by Modulating DNA Repair.
Corno C, Costantino M, Pettinari P, ..., D'Arcy P, Perego P
Int. J. Biol. Sci. 22 (11) 5780-5798 [2026-05-29; online 2026-05-29]
CRISPR Functional Genomics [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
ABHD2 activity is not required for the non-genomic action of progesterone on human sperm
Edwards M, Amaral A, Carter EM, ..., Gileadi O, Tredup C
Hum. Reprod. - (-) - [2026-05-29; online 2026-05-29]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Seasonal influenza mRNA vaccine induces stronger innate and comparable or better adaptive responses than licensed inactivated vaccines.
Bermúdez-Méndez E, Lenart K, Arcoverde Cerveira R, ..., Petsch B, Loré K
NPJ Vaccines 11 (1) - [2026-05-26; online 2026-05-26]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genomic characterization of Enterotoxigenic Escherichia coli lineage 2 (CS2 + CS3) by long-read sequencing reveals distinct lineage-specific genome organization.
Taheri N, Sjöling Å
Sci Rep 16 (1) - [2026-05-26; online 2026-05-26]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Resolving the Haplotype Complexity of Colorectal Cancer Genomes with Droplet Barcode Sequencing.
Siga H, Höjer P, Pourbozorgi P, ..., Williams C, Ahmadian A
Life (Basel) 16 (6) - [2026-05-22; online 2026-05-22]
NGI Other [Service] NGI Short read [Service] NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Frozen melanoma tissues yield extracellular vesicles with preserved diagnostic and immunogenic properties.
D Arrigo D, Park KS, Lässer C, ..., Lötvall J, Crescitelli R
BMC Med 24 (1) - [2026-05-21; online 2026-05-21]
Integrated Microscopy Technologies Gothenburg [Service]
DOI Crossref
A workflow for combined detection of protein interactions and cell types for translational studies
Okasmaa L, Ullman T, Panshikar P, ..., Ullén A, Stadler C
- - (-) - [2026-05-21; online 2026-05-21]
Spatial Proteomics [Technology development]
PubMed DOI Crossref
Probing biofilm development, stress response and heterogeneity-spectroscopic characterization of single and multi-species consortia.
Yunda E, Hagberg A, Duteil T, ..., Quilès F, Ramstedt M
NPJ Biofilms Microbiomes 12 (1) - [2026-05-20; online 2026-05-20]
Chemical Biology Consortium Sweden [Service] Integrated Microscopy Technologies Umeå [Service]
PubMed DOI Crossref
Comparing DNA metabarcoding with light microscopy to identify eukaryotic phytoplankton in the Baltic Sea, Kattegat and Skagerrak
Torstensson A, Brugel S, Andersson AF, ..., Lycken J, Andersson A
Sci Rep 16 (1) - [2026-05-19; online 2026-05-19]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Systematic discovery of motif-based interactions of the auxiliary domains of USP family deubiquitinases.
Konstantinou A, Córdova-Pérez A, Varga JK, ..., Kulathu Y, Ivarsson Y
Nat Commun 17 (1) - [2026-05-18; online 2026-05-18]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Comparison of BAFF and type I IFN activity in blood and placenta in SLE and healthy pregnancies.
Torell A, Andersson K, Gunnarsson I, ..., Lundell AC, Stockfelt M
Lupus Sci Med 13 (1) - [2026-05-18; online 2026-05-18]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
PubMed DOI Crossref
Open and closed forms of assembled henipavirus nucleoprotein suggest structural basis of genome access
Jayachandran RB, Quignon E, Renner M
Sci Adv 12 (20) eaed8300 [2026-05-15; online 2026-05-15]
Cryo-EM [Service]
PubMed DOI Crossref
Intestinal resident effector-memory CD4 T cells on the adaptive-innate spectrum comprise IL-18 reactivity and adaptive CMV specificity.
Kammann T, Voigt I, Wild N, ..., Jorns C, Sandberg JK
Sci Adv 12 (20) eaed0028 [2026-05-15; online 2026-05-15]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Dissecting placental host-pathogen interactions: Rift Valley fever virus infection in early human trophoblast stem cells.
Gwon YD, Haider S, Knöfler M, ..., Henriksson J, Evander M
iScience 29 (5) 115584 [2026-05-15; online 2026-04-03]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Early Clinical, Imaging, and Pathological Characteristics of SRPK3/TTN-Digenic Myopathy.
Orbach R, Donkervoort S, Hedberg-Oldfors C, ..., Oldfors A, Bönnemann CG
Ann Clin Transl Neurol - (-) - [2026-05-14; online 2026-05-14]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
PubMed DOI Crossref
Comparative biodegradation of functionalized graphene oxide nanosheets by myeloperoxidase and neutrophil extracellular traps.
Bahmani M, Gholami A, Ghaeidamini M, ..., Mijakovic I, Rahimi S
Front Bioeng Biotechnol 14 (-) 1797692 [2026-05-13; online 2026-05-13]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Structural Basis of Lipopolysaccharide O-Antigen Chain Length Modality.
Wiseman B, Widmalm G, Högbom M
Research (Wash D C) 9 (-) 1276 [2026-05-12; online 2026-05-12]
Cryo-EM [Service]
DOI Crossref
Decoding murine corneal epithelial specification and homeostasis by single-cell spatial transcriptomics with scRNA-seq enrichment
Javidjam D, Vattulainen M, Lagali N, Moustardas P
- - (-) - [2026-05-12; online 2026-05-12]
Clinical Genomics [Service] Clinical Genomics Linköping [Service]
DOI Crossref
Enzyme-activated Proximity of Oligonucleotides Sensing (EPOS), for precise monitoring of protein interactions
Heldin J, Wenson L, Wenz A, ..., Koos B, Söderberg O
- - (-) - [2026-05-11; online 2026-05-11]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Mitochondria serve as a holdout compartment for aggregation-prone proteins hindering efficient degradation.
Gierisch ME, Barchi E, Marogna M, ..., Salomons FA, Dantuma NP
Nat Commun 17 (1) - [2026-05-07; online 2026-05-07]
CRISPR Functional Genomics [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Neuroinflammation and neurodegeneration trigger a specific splice form of ribosomal protein S24
Magadi SS, Jonson M, Lucena PB, ..., Heneka MT, Jackson WS
Brain - (-) - [2026-05-06; online 2026-05-06]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Spruce Needles‐Derived N‐Doped Carbon as an Excellent Anode Material for Li‐Ion Batteries
Patthi RR, Manavalan G, Rao A, ..., Thyrel M, Petnikota S
ChemElectroChem 13 (9) - [2026-05-05; online 2026-04-27]
Integrated Microscopy Technologies Umeå [Service]
PubMed DOI Crossref
The Nuclear and Mitochondrial Genomes of the Lined Rockskipper, Istiblennius lineatus (Teleostei: Blenniidae).
Valencia-Cárdenas VM, Kulikov N, Contreras-Martín R, ..., Ord TJ, Irisarri I
Genome Biol Evol 18 (5) - [2026-05-01; online 2026-05-12]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Presence of bacterial DNA in synovial fluid from the temporomandibular joint in patients with temporomandibular joint disorders.
Bazsefidpay N, Ulmner M, Damdimopoulos A, Lund B
Front Oral Health 7 (-) 1764272 [2026-05-01; online 2026-05-01]
Clinical Genomics [Service] Clinical Genomics Örebro [Service]
PubMed DOI Crossref
Membrane-initiated estrogen receptor-α signaling in the hypothalamus regulates trabecular bone in femur in female mice.
Jiang Y, Horkeby K, Henning P, ..., Ohlsson C, Lagerquist MK
J Endocrinol 269 (2) - [2026-05-01; online 2026-05-20]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
PubMed DOI Crossref
Divergent cis regulatory haplotypes at Tlr2 are associated with immune responsiveness
Nandakumar M, Lundberg M, Nouri M, ..., Carlsson F, Råberg L
Mol. Biol. Evol. 43 (5) - [2026-05-01; online 2026-04-29]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Process development and pilot-scale validation of γ-valerolactone pretreatment for softwood biorefining
Dixit P, Benavente V, Gustafsson T, ..., Jönsson LJ, Martín C
Biomass and Bioenergy 208 (-) 108846 [2026-05-00; online 2026-05-00]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
MMP13-related Metaphyseal anadysplasia type 1 presenting with rickets-like manifestations in a family.
Thunström S, Antonsson P, Stenberg S, Aspholm EE, Swolin Eide D
Eur J Med Genet 81 (-) 105080 [2026-05-00; online 2026-04-30]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
DOI Crossref
LL‐37 Driven Phase Transition and Stacking in Oligolamellar Gram‐Negative Bacterial Membrane Models
Tran B, C.A. Lima D, Sandblad L, ..., Soares TA, Salentinig S
Adv Funct Materials 36 (38) - [2026-05-00; online 2026-03-11]
Cryo-EM [Collaborative]
PubMed DOI Crossref
Genetically Determined Levels of Inflammation-Related Proteins and Functional Outcome After Ischemic Stroke: A Mendelian Randomization Study.
Angerfors A, Andersson B, Furutjäll S, ..., Jern C, Stanne TM
J Stroke 28 (2) 312-315 [2026-05-00; online 2026-05-08]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
DOI Crossref
Epigenetic changes as regulatory mechanism for the expression of life history stages in Zonotrichia capensis inhabiting an aseasonal environment
Pértille F, Gonzalez‐ Gomez PL, Wingfield JC, Guerrero‐Bosagna C
Journal of Avian Biology 2026 (3) - [2026-05-00; online 2026-05-21]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The C16orf87 protein is a subunit of the MIER corepressor complex controlling embryonic development and cell migration.
Punga T, Larsson M, Mujica E, ..., Andersson L, Parrine D
Sci Rep 16 (1) - [2026-04-30; online 2026-04-30]
NGI Other [Service] NGI Short read [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Characterization of the Spent MgO-Based Refractory Lining from a Rotary Lime Kiln Cofired with Fossil Fuels and Potassium-Rich Biomass
Wagri NK, Carlborg M, Eriksson M, ..., Broström M, M Andersson B
Energy Fuels 40 (17) 9430-9444 [2026-04-30; online 2026-04-18]
Integrated Microscopy Technologies Umeå [Service]
PubMed DOI Crossref
ADAR1 Regulates Alternative Splicing Through an RNA Editing-Independent Mechanism.
Sagredo EA, Karlström V, Blanco A, ..., Castello A, Armisén R
Int J Mol Sci 27 (9) - [2026-04-29; online 2026-04-29]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Conserved molecular signatures of hygrosensory neurons in two dipteran species.
Corthals K, Giri G, Reimegård J, Churcher A, Enjin A
PLoS ONE 21 (4) e0347993 [2026-04-28; online 2026-04-28]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Breeding for climate adaptation: genetic variation and genomic selection for drought response in Scots pine.
Chaudhary R, Estravis Barcala M, Fundova I, ..., Chen ZQ, Wu HX
BMC Genomics 27 (1) - [2026-04-27; online 2026-04-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Longitudinal protein profiling of blood during childhood into early adulthood.
Bergström S, Björkander S, Bueno Álvez M, ..., Nilsson P, Melén E
Nat Commun 17 (1) - [2026-04-22; online 2026-04-22]
NGI Proteomics [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Human-supervised Agentic AI for Hypothesis Generation and Experimental Assistance in Drug Repurposing
Huynh DL, Asp E, Ballante F, ..., Aittokallio T, Spjuth O
- - (-) - [2026-04-22; online 2026-04-22]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Genetic and environmental influences on data missingness in developmental cognitive neuroscience.
Bussu G, Portugal AM, Viktorsson C, Hardiansyah I, Falck-Ytter T
Commun Psychol 4 (1) - [2026-04-22; online 2026-04-22]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Solvent-Selective Complexity Reduction of Effluent Dissolved Organic Matter for 1H NMR Spectroscopy.
Shakeri Yekta S, Enrich Prast A, Hedenström M, ..., Björn A, Hertkorn N
Anal. Chem. 98 (15) 11149-11157 [2026-04-21; online 2026-04-06]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Mitochondrial respirasome-like supercomplexes support metabolic flexibility in yeast.
Eldeeb MH, Cosner Z, Carlström A, ..., Ott M, Fontanesi F
Nat Commun 17 (1) - [2026-04-21; online 2026-04-21]
Cryo-EM [Service]
PubMed DOI Crossref
Ancient environmental genome reveals a migratory brown bear individual in Early Holocene Scandinavia.
Johnson E, Feinauer IS, Regnéll C, ..., Heintzman PD, Linderholm A
Proc. Natl. Acad. Sci. U.S.A. 123 (16) e2527944123 [2026-04-21; online 2026-04-13]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Unique sex chromosome translocations and evolutionary strata in two Sylvioidea songbird families.
Brown TJ, Ellerstrand SJ, Sigeman H, ..., Lundberg M, Hansson B
BMC Genomics 27 (1) - [2026-04-20; online 2026-04-20]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Rare regulatory mutations disrupt mesenchymal molecular programs driving endocardial cushion formation in bicuspid aortic valve.
Zhigulev A, Buyan A, Lázár E, ..., Björck HM, Sahlén P
Nat Commun 17 (1) - [2026-04-18; online 2026-04-18]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
RUVBL1 and RUVBL2 are druggable MYC effector regulators in neuroblastoma cells.
Siaw JT, Claeys A, Lai WY, ..., Palmer RH, Van den Eynden J
iScience 29 (4) 115236 [2026-04-17; online 2026-03-05]
NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genomic insights into fragmentation and translocation in European green toads.
Walderich LM, Susanto AW, Svensson M, ..., Rödin-Mörch P, Höglund J
iScience 29 (4) 115395 [2026-04-17; online 2026-03-17]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Functional PD-1/PD-L1 engagement defines a spatial biomarker of immunotherapy response
Ullman T, Krantz D, Avenel C, ..., Ullén A, Stadler C
- - (-) - [2026-04-17; online 2026-04-17]
Spatial Proteomics [Collaborative]
PubMed DOI Crossref
Origins of iAMP21 in children who later developed paediatric acute lymphoblastic leukemia: an investigation of neonatal blood spots.
Leijonhufvud G, Ljungström V, Amini RM, ..., Ford AM, Gustafsson B
Haematologica - (-) - [2026-04-16; online 2026-04-16]
Clinical Genomics [Service] Clinical Genomics Uppsala [Service]
PubMed DOI Crossref
Minor hemolysin-coregulated proteins (Hcp) form heteromeric complexes and mediate effector secretion in Bacteroidales type VI secretion systems.
San-Miguel SG, Hillier JB, Saleh Al-Ammari MK, ..., Uhlin BE, Cisneros DA
J. Biol. Chem. 302 (6) 111464 [2026-04-16; online 2026-04-16]
Cryo-EM [Collaborative] Structural Proteomics [Service]
PubMed DOI Crossref
Dabigatran Concentrations in an Actively Breastfeeding Mother-Infant Dyad: Extending the Evidence for Oral Thromboprophylaxis Postpartum.
Green RW, Saleh A, Baranczewski P
Am. J. Hematol. - (-) - [2026-04-16; online 2026-04-16]
Drug Discovery and Development [Collaborative]
PubMed DOI Crossref
Predicting post-stroke functional outcome using explainable machine learning and integrated data.
Olsson J, Stanne TM, Andersson B, Jern C
Sci Rep 16 (1) - [2026-04-15; online 2026-04-15]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Evidence for cable bacteria inhabiting deep in anoxic sediment reveals a novel ecological niche.
Fonseca A, Hermans M, Nascimento FJA, ..., Gustafsson BG, Humborg C
Environ Microbiome 21 (1) - [2026-04-15; online 2026-04-15]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Detecting TP53 mutations in paired liquid and tissue biopsies from patients with high-grade serous ovarian carcinoma.
Widjaja AO, Micallef P, Lycke M, ..., Linder A, Sundfeldt K
Int. J. Cancer 158 (8) 2043-2050 [2026-04-15; online 2025-12-09]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
PubMed DOI Crossref
A transcriptional atlas of the pubertal human growth plate reveals two populations of stem cells and direct effect of growth hormone.
Chu NTL, Dregval O, Zaman F, ..., Adameyko I, Chagin AS
Sci Transl Med 18 (845) eadw3590 [2026-04-15; online 2026-04-15]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
FOCU.SE trial: a nationwide Swedish drug repurposing protocol and research framework.
Abel E, Östling P, Hallersjö Hult E, ..., Edsjö A, FOCU.SE trial group
Acta Oncol 65 (-) - [2026-04-13; online 2026-04-13]
Clinical Genomics [Collaborative] Clinical Genomics Uppsala [Collaborative] Clinical Genomics Örebro [Collaborative]
DOI Crossref
Extracellular Vesicle-Enriched Secretome from Mesenchymal Stromal Cells Protects Against Chemically, Particulate-, and Ischemia-Induced Innate-Immunity Induced Inflammation
Park KS, Ordouzadeh N, Lazzari L, ..., Lötvall J, Dominici M
- - (-) - [2026-04-13; online 2026-04-13]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies.
Gudenas BL, Ahmad ST, Englinger B, ..., Filbin MG, Northcott PA
Cancer Cell 44 (4) 831-845.e10 [2026-04-13; online 2026-03-05]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Dimethyl Fumarate, But Not Rituximab, Reduces Serum GFAP Levels and PIRMA in Relapsing–Remitting MS
Shawket F, Lycke J, Salzer J, ..., Burman J, Svenningsson A
Ann Clin Transl Neurol - (-) - [2026-04-12; online 2026-04-12]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
An integrative molecular map of pediatric B-cell precursor acute lymphoblastic leukemia.
Krali O, Enblad AP, Sulyaeva J, ..., Lönnerholm G, Nordlund J
Commun Med (Lond) 6 (1) - [2026-04-11; online 2026-04-11]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A Phytophthora infestans CRN1-derived small RNA is predicted to target the potato immune regulator EDS1.
Singh S, Hu X, Dixelius C
Front Plant Sci 17 (-) 1791978 [2026-04-10; online 2026-04-10]
NGI Stockholm (Genomics Production) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
TNFα signaling in radiation-induced chronic bowel dysfunction suggests therapeutic potential for IBD biologics
Devarakonda S, Patel P, Toft Morén A, ..., Villablanca EJ, Bull C
Mol. Med. 32 (1) - [2026-04-09; online 2026-04-09]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Potent Neuronal Nicotinamide Adenine Dinucleotide-Boosting Tetrahydroquinoxalines: Structure-Activity Relationships and Early Drug Metabolism and Pharmacokinetics Evaluation.
Cuřínová P, Jöe M, Cesar F, ..., Brancale A, Williams PA
ACS Med Chem Lett 17 (4) 916-924 [2026-04-09; online 2026-03-04]
Drug Discovery and Development [Service]
PubMed DOI Crossref
Lectin pathway of complement in SLE: MAP-1 as a marker of haematological manifestations and elevated type I interferon activity.
Lindelöf L, Garred P, Hong MG, ..., Svenungsson E, Eriksson O
Lupus Sci Med 13 (1) - [2026-04-09; online 2026-04-09]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Single-cell analysis of inhibitory efferent neurons of the zebrafish lateral line.
Manuel R, Ahemaiti A, Tuz-Sasik MU, Boije H
PLoS ONE 21 (4) e0346255 [2026-04-08; online 2026-04-08]
Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service] NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Proviral NUP153 binding to viral proteins and RNA regulates structural-nonstructural protein ratios in orthoflavivirus infection.
Peters MBA, Lindqvist R, Kassa E, ..., Lundmark R, Överby AK
Nat Commun - (-) - [2026-04-08; online 2026-04-08]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Neoadjuvant palbociclib and endocrine therapy versus chemotherapy in ER + /HER2- breast cancer: a randomized phase II trial.
Matikas A, Tzoras E, Sarafidis M, ..., Hatschek T, Foukakis T
Nat Commun 17 (1) - [2026-04-08; online 2026-04-08]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
In vitro γ-aminobutyric acid A (GABAA) receptor activity and binding interactions at the α+/γ2- interface of 53 prescription and designer benzodiazepines.
Norman C, Liin SI, Jauregi-Miguel A, Ottosson NE, Gréen H
Commun Chem 9 (1) - [2026-04-07; online 2026-04-07]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Centromeric instability and chromoanasynthesis observed in nine supernumerary marker chromosomes resolved with long-read genome sequencing.
Bilgrav Saether K, Salazar Mantero A, Ek M, ..., Eisfeldt J, Lindstrand A
Genome Res. 36 (4) 661-670 [2026-04-07; online 2026-04-07]
NGI Long read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Generalist phyllosphere taxa dominate microbial communities on macrophytes across a natural salinity gradient
Herlemann DPR, Riedinger DJ, Fenández-Juárez V, ..., Rakowski M, Labrenz M
Environ Microbiome 21 (1) - [2026-04-04; online 2026-04-04]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Limosilactobacillus reuteri metabolites modulate immune pathways and intestinal barrier repair after 5 fluorouracil exposure.
Lasaviciute G, López Plana M, Sundberg Örtegren S, ..., Mata Forsberg M, Sverremark-Ekström E
Sci Rep 16 (1) - [2026-04-02; online 2026-04-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Time-adjusted performance evaluation (TAPE) of predictive multivariate models for bioprocess data
Eriksson A, Machleid R, Richelle A, ..., Cloarec O, Jonsson P
J Anal Sci Technol 17 (1) - [2026-04-01; online 2026-04-01]
Swedish NMR Centre [Service]
DOI Crossref
Nanoscale Podocyte Morphometrics Predict Disease Progression in IgA Nephropathy
Ebbestad R, Fatehi A, Olauson H, ..., Lundberg S, Unnersjö-Jess D
- - (-) - [2026-04-01; online 2026-04-01]
Integrated Microscopy Technologies Stockholm [Collaborative]
PubMed DOI Crossref
Gut microbiota transplantation from young adult mice fails to restore low bone and muscle mass in old mice.
Lawenius L, Hägg D, Horkeby K, ..., Ohlsson C, Sjögren K
Am J Physiol Endocrinol Metab 330 (4) E461-E470 [2026-04-01; online 2026-03-04]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service]
PubMed DOI Crossref
Comparative Genomics Provide Insight Into the Evolution of European Aphanomyces euteiches Strains.
Kälin C, Piombo E, Manyara D, ..., Dubey M, Karlsson M
Genome Biol Evol 18 (4) - [2026-04-01; online 2026-03-15]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
The contribution of wood‐inhabiting fungi and bacteria to dead wood decomposition varies along a regional climatic gradient
Gossmann A, Bahram M, Ranius T, Runnel K
Functional Ecology 40 (4) 893-906 [2026-04-00; online 2026-02-13]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Single-Cell Triomics Analysis of Tumor Cells Infiltrating Patient-Derived Breast Cancer Scaffolds.
Filges S, Jonasson E, Leiva Arrabal MDC, ..., Ruff D, Ståhlberg A
Am. J. Pathol. 196 (4) 1016-1027 [2026-04-00; online 2026-01-22]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Pre-diagnostic and diagnostic D-vitamin levels and risk of bladder cancer - A nested case-control study with follow-up at diagnosis
Hultdin J, Tellström A, Freyhult E, Landström M, Ljungberg B
Clinical Nutrition Open Science - (-) 100658 [2026-04-00; online 2026-04-00]
Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Phosphorus Acquisition Strategies Among Phytoplankton and Free-Living Bacterial Communities in the Baltic Proper.
Thomas M, Hanna F, Elin L, ..., Jarone P, Catherine L
Environ Microbiol Rep 18 (2) e70332 [2026-04-00; online 2026-04-17]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Pan-Continental Genomic Analysis of Eurasian Perch Uncovers Global Diversity Hotspots and Postglacial Recolonization Patterns.
Lichman V, Ozerov M, López ME, ..., Gross R, Vasemägi A
Ecol Evol 16 (-) e73502 [2026-04-00; online 2026-04-21]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Nasal gene expression shows a distinct signature in type 2-high asthma but not in type 2-low disease.
Karp T, Merid SK, Kermani NZ, ..., Guryev V, van den Berge M
J. Allergy Clin. Immunol. 157 (4) 879-889 [2026-04-00; online 2026-01-02]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Emergence of artemisinin-based combination therapy resistance markers in Plasmodium falciparum from the Brazilian tri-border region of the Guiana Shield.
Salazar YEAR, Rezende AM, Puça MCSB, ..., Gil JP, de Sousa TN
Antimicrob. Agents Chemother. 70 (4) e0152525 [2026-04-00; online 2026-03-12]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Differential negative dominance by KCNA2 variants associated with global developmental delay suggests KCNA2 haploinsufficiency in humans.
Boon PX, Jauregi-Miguel A, Yasarbas SS, ..., Shillington A, Pantazis A
J Physiol 604 (8) 3413-3430 [2026-04-00; online 2026-03-31]
Clinical Genomics [Service] Clinical Genomics Linköping [Service]
PubMed DOI Crossref
Development of Anti‐Inflammatory Extracellular Vesicles by Surface Expression of Syndecan‐4
Yu L, Bergqvist M, Park K, Lässer C, Lötvall J
J Extracell Vesicles 15 (4) e70266 [2026-04-00; online 2026-04-02]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Cell-specific DNA methylation in human alpha and beta cells regulates gene expression in type 2 diabetes.
Ofori JK, Ruhrmann S, Lindström A, ..., Bacos K, Ling C
Nat Metab 8 (4) 957-980 [2026-04-00; online 2026-04-24]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Cell-free RNA reveals host and microbial correlates of broadly neutralizing antibody development against HIV.
Kowarsky M, Dalman M, Moufarrej MN, ..., Camunas-Soler J, Quake SR
PLoS Pathog. 22 (4) e1014066 [2026-04-00; online 2026-04-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Bite-DNA Shows Substantial Browsing on Willows (Salix spp.) by North American Bison in Yellowstone National Park.
Jansson JL, Spitzer R, Brealey JC, Spong G
Ecol Evol 16 (4) e73354 [2026-04-00; online 2026-03-31]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
AlphaFold as a prior: experimental structure determination conditioned on a pretrained neural network
Fadini A, Li M, McCoy AJ, ..., Hekstra DR, AlQuraishi M
Nat Methods 23 (4) 785-795 [2026-04-00; online 2026-04-01]
Cryo-EM [Service]
PubMed DOI Crossref
ADAR1 Controls Macrophage Scavenging and Lipid-Buffering Programs in Metabolic Tissues.
Fardellas A, Barreby E, Brice M, ..., Aouadi M, Björkström NK
Eur. J. Immunol. 56 (4) e70189 [2026-04-00; online 2026-04-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A two-step mechanism for sugar translocation.
Ahn DH, Alleva C, Reichenbach T, ..., Widmalm G, Drew D
Nat. Struct. Mol. Biol. 33 (4) 652-663 [2026-04-00; online 2026-04-08]
Cryo-EM [Service]
DOI Crossref
Klebsiella pneumoniae T6SS exacerbates gut inflammation promoting tumorigenesis
Fragkoulis K, Uusi-Mäkelä MI, Sanz G, ..., Peuget S, Aschtgen MS
- - (-) - [2026-03-31; online 2026-03-31]
Spatial Proteomics [Service]
PubMed DOI Crossref
Comparative Transcriptome Profiling of Nicotiana benthamiana Plants Infected with Potato Mop-Top Virus and Its Mutant Lacking a Gene for the 8K Protein Underlines the Role of Chloroplasts During Infection.
Roy S, Nemes K, Saripella GV, ..., Siddique AB, Savenkov EI
Mol. Plant Microbe Interact. - (-) MPMI10250146R [2026-03-31; online 2026-03-31]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A high-coverage Neandertal genome from the Altai Mountains reveals population structure among Neandertals.
Massilani D, Peyrégne S, Iasi LNM, ..., Kelso J, Pääbo S
Proc. Natl. Acad. Sci. U.S.A. 123 (13) e2534576123 [2026-03-31; online 2026-03-23]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The genomic medicine center Karolinska 10-year report on genome sequencing for rare diseases and a strategy for stepwise clinical implementation.
Lindstrand A, Lagerstedt-Robinson K, Jemt A, ..., Wirta V, Wedell A
Genome Med 18 (1) - [2026-03-30; online 2026-03-30]
Clinical Genomics [Service] Clinical Genomics Stockholm [Service]
PubMed DOI Crossref
Quantitative proteomic and functional comparison of extracellular vesicles from multiple adipose tissue mesenchymal stem cell donors.
Park KS, Ha DH, Lee JH, ..., Cho BS, Lötvall J
Extracell Vesicles Circ Nucleic Acids. 7 (1) 425-440 [2026-03-30; online 2026-03-30]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Medical facemask waste alters detritus decomposition and fungal communities in a freshwater pond.
Kong ZH, Stangl M, Oester R, ..., Bundschuh M, Mckie BG
Sci Rep 16 (1) - [2026-03-30; online 2026-03-30]
NGI Long read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Linking gut microbiome to HIV-1 reservoir size in people living with HIV.
Kieri O, Narayanan A, Jütte BB, ..., Ray S, Nowak P
Gut Pathog 18 (1) - [2026-03-30; online 2026-03-30]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Contrasting population genomic structuring of northern pike ( Esox lucius L.) in fresh‐ and brackish water environments: Implications for management and conservation
Diaz‐Suarez A, López M, Sundblad G, Vasemägi A
J. Fish Biol. - (-) - [2026-03-30; online 2026-03-30]
NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Tumor-infiltrating immature innate lymphoid cells in colorectal cancer are biased toward ILC1/tissue-resident NK cell differentiation.
Marchalot A, Ljunggren M, Stamper C, ..., Nordenvall C, Mjösberg J
Nat Commun 17 (1) - [2026-03-27; online 2026-03-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
NorQD AAA+ complex drives metal insertion by a twisting mechanism.
Kahle M, Appelgren S, König F, ..., Ädelroth P, Wendler P
Nat Commun 17 (1) - [2026-03-27; online 2026-03-27]
Cryo-EM [Service]
PubMed DOI Crossref
Analysis of medieval burials from Ibiza reveals genetic and pathogenic diversity during the Islamic period.
Rodríguez-Varela R, Pochon Z, Mas-Sandoval A, ..., Schlebusch CM, Götherström A
Nat Commun 17 (1) - [2026-03-26; online 2026-03-26]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Temporal genomics reveals widespread but unexpected consequences of a bottleneck in the Scandinavian brown bear
Lindahl A, Lord E, Chacón-Duque JC, ..., Dalén L, Feinauer IS
R. Soc. open sci. 13 (3) - [2026-03-25; online 2026-03-25]
Ancient DNA [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Ribonuclease 4 Functions in Nociceptor-Mediated Nerve Homeostasis.
Feng X, Zhang K, Techameena P, ..., Gurumurthy CB, Hadjab S
Nat Commun 17 (1) - [2026-03-24; online 2026-03-24]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Tissue-layer-resolved proteome landscape of Crohn's disease strictures highlights potential drivers of fibrosis progression.
Alfredsson J, Sihlbom Wallem C, Östling M, ..., Bexe-Lindskog E, Wick MJ
JCI Insight 11 (6) - [2026-03-23; online 2026-02-10]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service] Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Filifactor alocis FtxA blocks inflammation and apoptosis pathways in monocytic cells.
Razooqi Z, Bao K, Yabrag A, ..., Nadeem A, Oscarsson J
Front. Cell. Infect. Microbiol. 16 (-) 1745721 [2026-03-23; online 2026-03-23]
Cryo-EM [Service] Integrated Microscopy Technologies Umeå [Service]
PubMed DOI Crossref
Electrochemical measurements at human iPSC-derived FOXA2 dopaminergic neurons suggest a role for partial release in presynaptic plasticity.
Gu C, Lork A, Majdi S, ..., Ernst C, Ewing AG
QRB Discovery 7 (-) e3 [2026-03-23; online 2026-03-23]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
A streamlined, nanopore-compatible 5PSeq protocol for rapid phenotypic antimicrobial sensitivity testing.
Liu H, Huch S, Hull R, ..., Du J, Pelechano V
Cell Reports Methods 6 (3) 101327 [2026-03-23; online 2026-03-12]
NGI Long read [Service] NGI Stockholm (Genomics Applications) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genetic predisposition to coffee consumption and the association with the early risk of atherosclerosis.
Qiao X, Toma VW, Wang J, ..., Zhong W, Iredahl F
Sci Rep 16 (1) - [2026-03-22; online 2026-03-22]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Avoiding Mitochondrial Apoptosis by the Bcl-2-Driven Bax Oligomerization on Membrane Surfaces
Ayscough SE, Clifton LA, Ådén J, ..., Wacklin-Knecht HP, Gröbner G
ACS Chem. Biol. 21 (3) 565-576 [2026-03-20; online 2026-02-18]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Transcription factor NFYA directs male meiotic entry by regulating accessible chromatin at meiotic promoters in mice
Säflund M, Askari M, Eghbali A, ..., Yu T, Özata DM
EMBO J. - (-) - [2026-03-19; online 2026-03-19]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Single-nucleus epigenomic profiling of the adult human central nervous system unveils epigenetic memory of developmental programs.
Kabbe M, Agirre E, Carlström KE, ..., Williams A, Castelo-Branco G
Nat. Neurosci. - (-) - [2026-03-19; online 2026-03-19]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Sex chromosome evolution mediated by a large inversion and a possible switch of the sex determination gene.
Mao X, Rafati N, Tellgren-Roth C, Ingvarsson PK, Karrenberg S
Genome Biol. 27 (1) - [2026-03-19; online 2026-03-19]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Long read [Collaborative] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Mapping the human chemical exposome for public health
David A, Lennon S, Mercier F, ..., Le Bizec B, Samson M
Nat Med - (-) - [2026-03-18; online 2026-03-18]
Exposomics [Collaborative]
PubMed DOI Crossref
Glioma-induced DNMT3A reduction in microglia promotes an anti-tumoral phenotype.
Cheray M, Posada-Pérez M, Fragkopoulou A, ..., Blomgren K, Joseph B
Cell Death Differ. - (-) - [2026-03-18; online 2026-03-18]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
FGFR signaling establishes spatial gradients of secretory cell identities along the airway proximal-distal axis.
Sountoulidis A, Theelke J, Liontos A, ..., Bellusci S, Samakovlis C
Nat Commun 17 (1) - [2026-03-18; online 2026-03-18]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A Swedish Haplotype GWAS in Familial and Sporadic Site-Specific Colorectal Cancer.
Vermani L, Barot S, Lindblom A
Int J Mol Sci 27 (6) - [2026-03-18; online 2026-03-18]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The population structure in the Baltic herring reflects natural selection and local adaptation.
Goodall J, Pettersson ME, Andersson A, ..., Andersson L, Laikre L
Proc. Natl. Acad. Sci. U.S.A. 123 (11) e2526500123 [2026-03-17; online 2026-03-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The Mycobacterium smegmatis bd-II terminal oxidase employs a carboxylate shift mechanism.
Kovalova T, Janczak M, Gamiz-Hernandez AP, ..., Högbom M, Ädelroth P
Proc. Natl. Acad. Sci. U.S.A. 123 (11) e2515348123 [2026-03-17; online 2026-03-10]
Cryo-EM [Service]
PubMed DOI Crossref
Genomic identification and complete mitochondrial recovery of a Late Holocene porcupine (Erethizon dorsatum) mummy from Yukon permafrost
Selvatici S, Jin C, Zazula G, ..., Díez-del-Molino D, Oteo-García G
Sci Rep 16 (1) - [2026-03-17; online 2026-03-17]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Proteomic profiling reveals pleiotropic antimetabolite activity of triciribine in acute lymphoblastic leukemia
Qi X, Mermelekas G, Hodek O, ..., Lehtiö J, Jafari R
- - (-) - [2026-03-16; online 2026-03-16]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Paralog-aware assembly and filtering strategies reveal minimal nucleotide variation on the macro germline-restricted chromosome of the zebra finch.
Chen A, Ruiz-Ruano FJ, Contreras-López O, ..., Suh A, Pei Y
Heredity (Edinb) - (-) - [2026-03-16; online 2026-03-16]
NGI Long read [Service] NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
DOI Crossref
A chemical inducer of ribophagy limits the toxicity of ALS-related arginine-rich peptides
Porebski B, Lafarga V, Hansel C, ..., Hühn D, Fernández-Capetillo O
- - (-) - [2026-03-15; online 2026-03-15]
Chemical Biology Consortium Sweden [Collaborative]
DOI Crossref
Structural similarities of molecules selectively binding the prfA thermosensor RNA
Scheller D, Das R, Chorell E, Johansson J
- - (-) - [2026-03-11; online 2026-03-11]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Midostaurin response in AML is shaped by a progenitor-like cell state selectively targeted by SMAC mimetics.
Struyf N, Gezelius H, Lundmark A, ..., Kallioniemi O, Erkers T
NPJ Precis Oncol 10 (1) - [2026-03-11; online 2026-03-11]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Proteomic analysis of tissue-derived extracellular vesicles shows region-specific molecular changes in a rat model of takotsubo syndrome.
Zulfaj E, Nejat A, Kalani M, ..., Redfors B, Omerovic E
Sci Rep 16 (1) - [2026-03-10; online 2026-03-10]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Persistent interferon signaling causes sensory neuron plasticity and pain before and during arthritis.
Su J, Zhang MD, Kupari J, ..., Holmdahl R, Ernfors P
Nat. Neurosci. - (-) - [2026-03-10; online 2026-03-10]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Whole genomes reveal subpopulations and isolation-by-distance patterns in the Norwegian lemming.
Feinauer IS, Ravasini F, Lagerholm VK, ..., Angerbjörn A, Dalén L
BMC Biol. 24 (1) - [2026-03-06; online 2026-03-06]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] NGI Long read [Collaborative] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
PubMed DOI Crossref
Polycomb repression works without Siesta, the Drosophila ortholog of mammalian PCGF3.
Kahn TG, Garrido A, Yushkova A, ..., Larsson J, Schwartz YB
Sci Adv 12 (10) eaec0733 [2026-03-06; online 2026-03-06]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Above-Filter Digestion Proteomics Reveals Drug Targets and Localizes Ligand Binding Site
Sokolova B, Gharibi H, Jafari M, ..., Saei AA, Zubarev RA
J. Proteome Res. 25 (3) 1556-1570 [2026-03-06; online 2026-02-07]
Chemical Proteomics [Technology development]
PubMed DOI Crossref
Metabarcoding Reveals Rich and Diverse Aeromycobiota in Protected Oak Forests.
Lygis V, Marčiulynas A, Plepytė T, Šulčius S, Menkis A
Microb. Ecol. 89 (1) - [2026-03-04; online 2026-03-04]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Better reporting is better science: Community-defined minimal reporting requirements for light microscopy.
Montero Llopis P, van Oostende-Triplet C, Gaudreault N, ..., Walther C, Nitschke R
J. Cell Biol. 225 (3) - [2026-03-02; online 2026-02-25]
Integrated Microscopy Technologies Gothenburg [Technology development]
PubMed DOI Crossref
Twist-ONT: Combining nanopore sequencing with the twist comprehensive viral research panel.
Haars J, Cumlin T, Ladenvall C, Lennerstrand J, Kaden R
Virology 616 (-) 110789 [2026-03-00; online 2026-01-07]
Clinical Genomics [Collaborative] Clinical Genomics Uppsala [Collaborative]
PubMed DOI Crossref
The HUNT study identifies host genetic factors reproducibly associated with human gut microbiota composition
Moksnes MR, Coward E, Nethander M, ..., Hveem K, Ohlsson C
Nat Genet 58 (3) 530-539 [2026-03-00; online 2026-02-13]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Resource Availability Modulates Gene Expression Across Life Stages in a Migratory Butterfly.
Shipilina D, Höök L, Näsvall K, ..., Talavera G, Backström N
Mol. Ecol. 35 (5) e70293 [2026-03-00; online 2026-03-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Optimizing T cell responses of targeted peptide antigen delivery by modulating antigen processing through amino acid exchange.
Laurén I, Kostakis A, Lord M, ..., Hansson P, Mangsbo S
International Journal of Biological Macromolecules 352 (-) 151135 [2026-03-00; online 2026-02-28]
Drug Discovery and Development [Service]
PubMed DOI Crossref
Novel Long-Read Sequencing Method for Characterisation of Hepatitis B Transcripts Show High Expression of Chimeric HBV/Human RNA.
Stenbäck JB, Ringlander J, Andersson M, ..., Rydell GE, Lindh M
Liver Int. 46 (3) e70521 [2026-03-00; online 2026-02-13]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
DOI Crossref
Mycelial biomass growth stage at death determines fungal necromass decay dynamics
Maillard F, Lopes Ramos D, Zhang B, ..., Persson P, Tunlid A
Soil Biology and Biochemistry 214 (-) 110079 [2026-03-00; online 2026-03-00]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Genome-wide association analyses highlight the role of the intestinal molecular environment in human gut microbiota variation.
Dekkers KF, Pertiwi K, Baldanzi G, ..., Orho-Melander M, Fall T
Nat. Genet. 58 (3) 540-549 [2026-03-00; online 2026-02-13]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Evolution of hydration in cement blends with incorporation of activated low-kaolinite clays: Insights into the preferred aluminum uptake by C-(A)-S-H
Hazarika A, Huang L, Figueira J, Babaahmadi A
Cement and Concrete Research 201 (-) 108086 [2026-03-00; online 2026-03-00]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Enrichment of Neural Crest Cells by Antibody Labeling and Flow Cytometry for Single-Cell Transcriptomics in a Lizard.
Pranter R, Patthey C, Feiner N
Evol Dev 28 (1) e70030 [2026-03-00; online 2026-02-19]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Distinct diversity trajectories of boreal wood‐inhabiting fungi following fire versus clear‐cutting
Buness V, Gundale MJ, Lindahl BD, ..., Nilsson M, Sundqvist MK
J Ecol 114 (3) - [2026-03-00; online 2026-03-13]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Discovering and protecting cryptic biodiversity: A case study of a previously undescribed, vulnerable bird species in Japan.
Saitoh T, Shipilina D, Xia C, ..., Olsson U, Alström P
PNAS Nexus 5 (3) pgag037 [2026-03-00; online 2026-03-17]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
An Equatorial Hemispheric Barrier Shapes the Diversification of Migratory Belenois Butterflies.
Janiczek A, Palahí A, Dapporto L, ..., Suchan T, Talavera G
Mol. Ecol. 35 (6) e70310 [2026-03-00; online 2026-03-20]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Accumulation of high-risk genetic features after chemoimmunotherapy: A longitudinal study in mantle cell lymphoma.
Nikkarinen A, Almlöf J, Österroos A, ..., Baliakas P, Glimelius I
Leukemia 40 (3) 681-684 [2026-03-00; online 2026-02-04]
Clinical Genomics [Collaborative] Clinical Genomics Uppsala [Collaborative]
PubMed DOI Crossref
A tryptophan-phenylalanine binding motif for the histone methyltransferases MLL4 and MLL3.
Biswas S, Tavaf Z, Benz C, ..., Ivarsson Y, Kutateladze TG
J. Biol. Chem. 302 (3) 111189 [2026-03-00; online 2026-01-23]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Symbiotic Diversity of Sap-Feeding Auchenorrhyncha (Hemiptera) in the Upland Landscapes of Central Cardamom Mountains, Cambodia.
Phauk S, Sin S, Terenius O
Microb. Ecol. 89 (1) - [2026-02-28; online 2026-02-28]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Nallo: a Nextflow pipeline for comprehensive human long-read genome analysis.
Lenner F, Jemt A, Peña Pérez L, ..., Ameur A, Feuk L
Bioinformatics 42 (3) - [2026-02-28; online 2026-02-19]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative] Clinical Genomics Stockholm [Collaborative] NGI Long read [Technology development] NGI Uppsala (Uppsala Genome Center) [Technology development] National Genomics Infrastructure [Technology development]
PubMed DOI Crossref
Novel activating SNRNP70-ALK fusion in congenital infant-type hemispheric glioma displays clinical response to lorlatinib: a case-report.
Arthur C, Georgantzi K, de Ståhl TD, ..., Palmer R, Tham E
NPJ Precis Oncol 10 (1) - [2026-02-26; online 2026-02-26]
NGI SNP genotyping [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Convergent and lineage-specific genomic changes shape adaptations in sugar-consuming birds
Osipova E, Ko MC, Petricek KM, ..., Hiller M, Sackton TB
Science 391 (6788) - [2026-02-26; online 2026-02-26]
NGI Long read [Collaborative] NGI Uppsala (Uppsala Genome Center) [Collaborative] National Genomics Infrastructure [Collaborative]
DOI Crossref
Isotopic insights into long-term socio-economic transformations in prehistoric Kuyavia, Poland
Pospieszny Ł, Lewis J, Wiltshire IL, ..., Starzyński K, Roffet-Salque M
R. Soc. open sci. 13 (2) - [2026-02-25; online 2026-02-25]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The N-Myc MB0-MBI region interacts specifically and dynamically with the N-lobe of Aurora kinase A.
Hultman J, Morad V, Tanner E, ..., Ahlner A, Sunnerhagen M
Nat Commun 17 (1) - [2026-02-24; online 2026-02-24]
Structural Proteomics [Collaborative]
PubMed DOI Crossref
Silicone-Foam Passive Air Samplers for Combined Target and Nontarget Chemical Profiling and Toxicity Assessment of Airborne Exposomes
Sunyer-Caldú A, Xie H, Bonnefille B, ..., Papazian S, Martin JW
Environ. Sci. Technol. 60 (7) 5628-5644 [2026-02-24; online 2026-02-10]
Exposomics [Technology development]
PubMed DOI Crossref
RAPseq enables large-scale identification of RBP-RNA interactions and reveals essentials of post-transcriptional gene regulation.
Mosca R, Gallardo-Dodd CJ, Li Q, ..., Søndergaard JN, Kutter C
Nucleic Acids Res. 54 (5) - [2026-02-24; online 2026-02-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Lipid‐Facilitated Opening of the ADAM10 Sheddase Revealed by Enhanced Sampling Simulations
Schahl A, Haloi N, Carroni M, ..., Delemotte L, Howard RJ
Adv Sci (Weinh) - (-) e15713 [2026-02-24; online 2026-02-24]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Bifidobacterium longum and prebiotic interventions restore early-life high-fat/high-sugar diet-induced alterations in feeding behavior in adult mice.
Cuesta-Marti C, Ponce-España E, Uhlig F, ..., O'Mahony SM, Schellekens H
Nat Commun 17 (1) - [2026-02-24; online 2026-02-24]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Subregional differences in the hippocampal transcriptomic response after penetrating traumatic brain injury in rats.
Lidin E, Risling M, Sköld MK
Front Neurol 16 (-) 1729794 [2026-02-23; online 2026-02-23]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Accuracy of occurrence and abundance estimates from insect metabarcoding.
Iwaszkiewicz-Eggebrecht E, Granqvist E, Nowak KH, ..., Meier R, Ronquist F
bioRxiv - (-) - [2026-02-22; online 2026-02-22]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Shared stream-lake patterns in diversity, rRNA-based activity and community assembly of bacteria and microeukaryotes under distinct hydrological regimes.
Papadopoulou S, Lindström ES
FEMS Microbiol. Ecol. 102 (3) - [2026-02-19; online 2026-02-11]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
CSF protein biomarkers are associated with atrophy and symptom severity in genetic FTD: a GENFI study
Ullgren A, Rydell MT, Bergström S, ..., Westman E, Graff C
J Neural Transm - (-) - [2026-02-19; online 2026-02-19]
PubMed DOI Crossref
Antibiotic resistance gradient along a large Scandinavian river influenced by wastewater treatment plants.
Gómez-Martínez D, Ngou JS, Ugolini V, ..., Kristiansson E, Corcoll N
FEMS Microbiol. Ecol. 102 (3) - [2026-02-19; online 2026-02-03]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Structural defects in amyloid-β fibrils drive secondary nucleation
Hu J, Scheidt T, Thacker D, ..., Michaels TCT, Dear AJ
Nat Commun 17 (1) - [2026-02-18; online 2026-02-18]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Genetic relatedness mattered in the co-burial ritual of Neolithic hunter-gatherers.
Mattila TM, Fraser M, Koelman J, ..., Wallin P, Malmström H
Proc. Biol. Sci. 293 (2065) - [2026-02-18; online 2026-02-18]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Homologous recombination deficiency in primary ER-positive and HER2-negative breast cancer.
Davies HR, Black D, Kvist A, ..., Nik-Zainal S, Staaf J
Commun Med (Lond) 6 (1) 118 [2026-02-16; online 2026-02-16]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Distinct radial glia subtypes regulate midbrain dopaminergic neuron development.
Ásgrímsdóttir ES, Bassini LF, Sun T, ..., Toledo EM, Arenas E
Nat. Neurosci. - (-) - [2026-02-16; online 2026-02-16]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Spatial evidence for carcinoma in situ (CIS) as an entity in human papillomavirus (HPV)-associated tonsillar squamous cell carcinoma (TSCC).
Näsman T, Birgersson M, Marklund L, Näsman A
Int. J. Cancer 158 (4) 1080-1092 [2026-02-15; online 2025-10-23]
NGI Short read [Service] NGI Spatial omics [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Multiomics assessment of lung adenocarcinoma subtypes defined through tumor purity-adjusted DNA methylation.
Nacer DF, Arbajian E, Veerla S, ..., Planck M, Staaf J
Genome Med 18 (1) - [2026-02-14; online 2026-02-14]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Exploring microbial diversity using cell-size fractionated enrichment incubations from subsurface aquifers at Äspö, Sweden.
Westmeijer G, Turner S, Hevele P, ..., Bertilsson S, Dopson M
Commun Biol - (-) - [2026-02-14; online 2026-02-14]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Rare germline variants contribute to glioma predisposition: Whole-genome analysis of a regional cohort of glioma patients.
Rosenbaum A, Wibom C, Hammermeister Suger A, ..., Dahlin AM, Melin B
Neurooncol Adv 8 (1) vdag038 [2026-02-12; online 2026-02-12]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Efficacy of mebendazole in the spontaneous NZBxNZWF1 animal model of systemic lupus erythematosus.
Eloranta ML, Nygren P, Larsson R, ..., Rönnblom L, Fryknäs M
Sci Rep 16 (1) 6357 [2026-02-12; online 2026-02-12]
Drug Discovery and Development [Service]
PubMed DOI Crossref
Spatial overlap and temporal synchrony between guilds of insect hosts and parasitoids
van Dijk LJA, Goodsell RM, Andersson AF, ..., Roslin T, Tack AJM
Journal of Animal Ecology - (-) - [2026-02-10; online 2026-02-10]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genome Sequencing in 19 Families With Bladder Exstrophy and Epispadias Complex Indicates Involvement of the ADGR-Gene Family.
Nordenskjöld A, Alm S, Eisfeldt J, ..., Lindstrand A, Lagerstedt-Robinson K
Am. J. Med. Genet. A - (-) - [2026-02-10; online 2026-02-10]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
MYC modulates TOP2A diffusion to promote substrate detection and activity
Cameron DP, Jackson K, Loffreda A, ..., Mazza D, Baranello L
Nat Commun 17 (1) - [2026-02-09; online 2026-02-09]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Targeted CSF metabolomics and conformal prediction improve diagnostic accuracy of normal pressure hydrocephalus.
Hofling U, Jakobsson J, Erngren I, ..., Kultima K, Virhammar J
Fluids Barriers CNS 23 (1) - [2026-02-07; online 2026-02-07]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
DOI Crossref
Antiparallel stacking of Csu pili drives Acinetobacter baumannii 3D biofilm assembly
Malmi H, Pakharukova N, Paul B, ..., Ghosal D, Zavialov AV
Nat Commun 17 (1) - [2026-02-07; online 2026-02-07]
Cryo-EM [Service] Integrated Microscopy Technologies Umeå [Service]
PubMed DOI Crossref
Multi-omics data integration from patients with carotid stenosis illuminates key molecular signatures of atherosclerotic instability.
Das V, Narayanan S, Zhang X, ..., Hedin U, Matic L
Genome Med 18 (1) - [2026-02-06; online 2026-02-06]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Two-step voltage-sensor activation of the human KV7.4 channel and effect of a deafness-associated mutation.
Nappi M, Frampton DJA, Kusay AS, ..., Taglialatela M, Pantazis A
Nat Commun 17 (1) - [2026-02-05; online 2026-02-05]
Clinical Genomics [Service] Clinical Genomics Linköping [Service]
PubMed DOI Crossref
Molecular interactome of HNRNPU reveals regulatory networks in neuronal differentiation and DNA methylation.
Oksanen M, Mastropasqua F, Mazan-Mamczarz K, ..., Gorospe M, Tammimies K
Nucleic Acids Res. 54 (4) - [2026-02-05; online 2026-02-12]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
TGFβ signaling promotes cell cycle progression and resistance to the CDK4/6 inhibitor palbociclib through SOX4 transcriptional modulation in breast cancer cells.
Ali MM, Itoh Y, Badji AMP, ..., Heldin CH, Moustakas A
Cell Death Dis 17 (1) 209 [2026-02-04; online 2026-02-04]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Dual-Color Expansion Microscopy of Membrane Proteins Using Bioorthogonal Labeling
Edwards S, Meineke B, Bauer S, ..., Elsässer S, Brismar H
Nano Lett. 26 (4) 1321-1326 [2026-02-04; online 2026-01-22]
Integrated Microscopy Technologies Stockholm [Technology development]
PubMed DOI Crossref
Mechanistic insights into PCBP1-driven unfolding of selected i-motif DNA at G1/S checkpoint.
Sengupta P, Gillet N, Obi I, Sabouri N
Nat Commun 17 (1) 1149 [2026-02-02; online 2026-02-02]
Swedish NMR Centre [Service]
PubMed DOI Crossref
Enhancement of Antibacterial Activity of Carbon Dots via Lysozyme Coupling.
Wang T, Opoku H, Li M, ..., Wang J, Kou W
ACS Appl Bio Mater 9 (3) 1499-1508 [2026-02-02; online 2026-01-13]
Cryo-EM [Service]
PubMed DOI Crossref
Warming Causes a Decline in Baltic Sea Coastal Sediment Microbial Abundance.
Seidel L, Li S, Hanna-Elias S, ..., Ketzer M, Dopson M
Environ. Microbiol. 28 (2) e70256 [2026-02-00; online 2026-02-19]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Translational activators align mRNAs at the small mitoribosomal subunit for translation initiation.
Bridgers JB, Carlström A, Sherpa D, ..., Ott M, Churchman LS
Nat. Struct. Mol. Biol. 33 (2) 245-258 [2026-02-00; online 2025-12-03]
Cryo-EM [Service]
PubMed DOI Crossref
The regulatory code of injury-responsive enhancers enables precision cell-state targeting in the CNS.
Zamboni M, Martínez-Martín A, Rydholm G, ..., Ziegenhain C, Llorens-Bobadilla E
Nat. Neurosci. 29 (2) 337-349 [2026-02-00; online 2025-12-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Hierarchical Porosity Engineering of Birch‐Derived Carbons via KOH Activation for High‐Performance Aluminum Batteries
E S S, Paul M, Manavalan G, ..., Thyrel M, Petnikota S
Batteries & Supercaps 9 (2) - [2026-02-00; online 2026-02-08]
Integrated Microscopy Technologies Umeå [Service]
DOI Crossref
From Permits to Samples: Addressing Key Challenges for High‐Quality Reference Genome Generation in Europe
Reichel K, Pohjoismäki J, Astrin JJ, ..., Zinenko O, de Guttry C
Mol Ecol Resour 26 (2) - [2026-02-00; online 2026-01-20]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Fibroblast growth factor signals drive the metastatic behavior in small cell lung cancer.
Ernhofer B, Solta A, Sinner J, ..., Dome B, Schelch K
Br. J. Cancer 134 (4) 543-554 [2026-02-00; online 2025-12-13]
Clinical Proteomics Lund [Service]
PubMed DOI Crossref
Exploration of immune phenotypes in self-sampling citizens
Dahl L, Bendes A, Álvez MB, ..., Roxhed N, Schwenk JM
iScience 29 (2) 114611 [2026-02-00; online 2026-02-00]
NGI Short read [Collaborative] NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Collaborative]
DOI Crossref
Experimental and machine learning-based exploration of repurposed drugs reveals chemical features underlying phospholipidosis
Kuzikov M, Kalman A, Karki R, ..., Gribbon P, Zaliani A
Patterns - (-) 101453 [2026-02-00; online 2026-02-00]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
Change in healthcare utilization before and after COVID-19 using data from 1.5 million individuals.
Bygdell M, Bülow E, Larsson SB, ..., Strålin K, Nyberg F
J. Intern. Med. 299 (2) 255-270 [2026-02-00; online 2025-11-27]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Albacarcin V adds EPLIN as a novel and promising target for the treatment of female cancers and pediatric medulloblastoma.
Krahulcová L, Lindell E, Lu X, ..., Sjöblom T, Zhang X
Biochem. Pharmacol. 244 (-) 117625 [2026-02-00; online 2025-12-06]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
SOX21 suppresses glioblastoma growth by repressing AP-1 activity
Rrapaj E, Yuan J, Kurtsdotter I, ..., Bergsland M, Muhr J
Cell Death Dis 17 (1) 191 [2026-01-31; online 2026-01-31]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Ratios of CSF proteins reflect cognitive function in ALS
Öijerstedt L, Mravinacová S, Olofsson J, ..., Månberg A, Ingre C
Alzheimers Res Ther 18 (1) - [2026-01-31; online 2026-01-31]
PubMed DOI Crossref
Comprehensive profiling of CRISPR/dCas9 epigenome editors indicates a complex link between on and off target effects
Pahlevan Kakhki M, Rangani F, Ewing E, ..., Kular L, Jagodic M
Genome Biol. 27 (1) - [2026-01-31; online 2026-01-31]
NGI SNP genotyping [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Skeletal Muscle Microbiopsies in Children and Adults-Tolerability, Sample Yield, and Analyzability.
Högelin ER, Edman S, Jannig PR, ..., von Walden F, Fornander L
Muscle Nerve - (-) - [2026-01-30; online 2026-01-30]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Mixed gangliocytoma-pituitary neuroendocrine tumour: clinical, immunohistochemical, and molecular genetic profiles in a series of four patients.
Dalakas K, Engström BE, Tebani A, ..., Ragnarsson O, Casar-Borota O
Acta Neuropathol Commun 14 (1) - [2026-01-30; online 2026-01-30]
Clinical Genomics [Collaborative] Clinical Genomics Uppsala [Collaborative]
PubMed DOI Crossref
Single-Cell Comparison of Small Intestinal Neuroendocrine Tumors and Enterochromaffin Cells from Two Patients.
Axling F, Barazeghi E, Hellman P, ..., Backman S, Stålberg P
Cancers (Basel) 18 (3) - [2026-01-29; online 2026-01-29]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Allergen-specific human IgE isolated through an allergen-agnostic pipeline—understanding immune response and allergen recognition
Thörnqvist L, Franciskovic E, Godzwon M, ..., Levander F, Ohlin M
Commun Biol 9 (1) - [2026-01-28; online 2026-01-28]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Exploration of a workflow for the classification and identification of co-purified protein complexes yields new structures and multiple MSP assembly states.
Zhang Q, Murthy AV, Mim C
PLoS ONE 21 (1) e0340207 [2026-01-27; online 2026-01-27]
Cryo-EM [Service]
DOI Crossref
A study of k-mer patterns within DNA molecules sequenced from a chondrite
Farage C, Bachelet I
- - (-) - [2026-01-27; online 2026-01-27]
Ancient DNA [Service]
PubMed DOI Crossref
Effects of incrementally increased plant-based protein intake on gut microbiota and inflammatory-metabolic biomarkers in healthy adults.
Prado S, Kamm A, Dannenberg K, ..., Marques TM, Brummer RJ
Food Funct 17 (2) 942-956 [2026-01-26; online 2026-01-26]
Clinical Genomics [Collaborative] Clinical Genomics Örebro [Collaborative]
PubMed DOI Crossref
NUP98 regulates orthoflavivirus replication through interaction with vRNA and can be targeted for antiviral purposes.
Peters MBA, Lindqvist R, Madhu P, ..., Ivarsson Y, Överby AK
Nucleic Acids Res. 54 (3) - [2026-01-22; online 2026-01-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Anoctamin-2-specific T cells link Epstein-Barr virus to multiple sclerosis.
Thomas OG, Rykaczewska U, Galešić M, ..., Guerreiro-Cacais AO, Olsson T
Cell 189 (2) 585-602.e38 [2026-01-22; online 2026-01-13]
Autoimmunity and Serology Profiling [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
Genetiska släktskapsanalyser och individerna från Riddarholmskyrkan (Magnus Ladulås grav: om sökandet i Riddarholmskyrkan)
Malmström H
- - (-) - [2026-01-21]
Ancient DNA [Service]
PubMed DOI Crossref
Draft assemblies for 177 bird species enhance genus-level coverage
Chen G, Wang S, Bilyeli Øksnebjerg D, ..., Gilbert MTP, Zhang G
Gigascience 15 (-) - [2026-01-21; online 2026-05-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Morphology-modified contributions of electronic transitions to the optical response of plasmonic nanoporous gold metamaterial.
Tapani T, Pettersson JM, Henriksson N, ..., Garoli D, Maccaferri N
Nat Commun 17 (1) 829 [2026-01-20; online 2026-01-20]
Integrated Microscopy Technologies Umeå [Service]
DOI Crossref
Integrative Epigenomic and Transcriptomic Profiling Define Malignancy- and Cluster-Specific Signatures in Pheochromocytomas and Paragangliomas
Tabebi M, Łysiak M, Gimm O, Söderkvist P
Cells 15 (2) 198 [2026-01-20; online 2026-01-20]
Clinical Genomics [Service] Clinical Genomics Linköping [Collaborative]
PubMed DOI Crossref
Cryo-electron tomography reveals coupled flavivirus replication, budding and maturation.
Dahmane S, Schexnaydre E, Zhang J, ..., Överby AK, Carlson LA
Nat Commun 17 (1) 828 [2026-01-20; online 2026-01-20]
Cryo-EM [Collaborative]
Results of Archaeological Research on Burials at St. George’s Church in Gokhnari
Sulkhanishvili D, Ioramashvili S, Mshvildadze M, Goguadze D, Burjanadze G
Chronos 6 (-) 220–246 [2026-01-15; online 2026-01-15]
Ancient DNA [Service]
PubMed DOI Crossref
In situ mapping of activated PDGFRβ defines a prognostic discrepancy between histological subtypes of NSCLC.
Lindberg A, Hellberg L, Grandon A, ..., Micke P, Strell C
Cell Commun Signal 24 (1) 55 [2026-01-15; online 2026-01-15]
BioImage Informatics [Collaborative] Bioinformatics (NBIS) [Collaborative]
PubMed DOI Crossref
The long noncoding RNA VIM-AS1 and nucleoporin Nup358/RanBP2 regulate SMAD nuclear accumulation during TGF-β signaling.
Rodrigues-Junior DM, Ali MM, Itoh Y, ..., Heldin CH, Moustakas A
Nucleic Acids Res. 54 (2) - [2026-01-14; online 2026-01-20]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Phylum-wide propionate degradation and its potential connection to poly-gamma-glutamate biosynthesis in Candidatus Cloacimonadota phylum.
Calusinska M, Herold M, Klimek D, ..., Delfosse P, Goux X
ISME J 20 (1) - [2026-01-14; online 2026-03-18]
Clinical Genomics [Collaborative] Clinical Genomics Linköping [Collaborative]
PubMed DOI Crossref
Metabolic interactions between bacterial co-isolates from catheter-associated urinary tract infections
Sokol D, Rzhepishevska O, Marynova I, ..., Antti H, Ramstedt M
Sci Rep 16 (1) 2061 [2026-01-14; online 2026-01-14]
Chemical Biology Consortium Sweden [Service]
PubMed DOI Crossref
High-resolution structure of proIAPP(1-48) fibrils suggests a mechanistic pathway for diabetes-associated IAPP fibril polymorphs.
Valli D, Maj M
RSC Chem Biol 7 (1) 38-43 [2026-01-14; online 2025-10-31]
Cryo-EM [Service]
PubMed DOI Crossref
Dealing with phosphorus deficiency: contrasting strategies in marine phytoplankton and bacteria
Delgadillo-Nuño E, Teira E, Fernández E, ..., Pinhassi J, Martínez-García S
ISME COMMUN. 6 (1) ycag035 [2026-01-14; online 2026-02-20]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Cefiderocol resistance genes identified in environmental samples using functional metagenomics.
Gschwind R, Bonnet M, Abramova A, ..., Bengtsson-Palme J, Ruppé E
ISME J 20 (1) - [2026-01-14; online 2026-01-28]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Active methylotrophic methanogenesis by a microbial consortium enriched from a terrestrial meteorite impact crater.
van Dam F, Westmeijer G, Rezaei Somee M, ..., Dopson M, Drake H
MBio 17 (1) e0301725 [2026-01-14; online 2025-11-25]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A combinatorial transcription factor screening platform for immune cell reprogramming.
Kurochkin I, Altman AR, Caiado I, ..., Theis FJ, Pereira CF
Cell Syst - (-) 101457 [2026-01-14; online 2026-01-14]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Structural basis for late maturation steps of mitochondrial respiratory chain complex IV within the human respirasome.
Nguyen MD, Sierra-Magro A, Singh V, ..., Barrientos A, Rorbach J
Nat Commun - (-) - [2026-01-10; online 2026-01-10]
Cryo-EM [Service]
PubMed DOI Crossref
Proteomic and Lipidomic Profiling of Immune Cell‐Derived Subpopulations of Extracellular Vesicles
Lischnig A, Karimi N, Larsson P, ..., Olin A, Lässer C
Proteomics - (-) e70096 [2026-01-10; online 2026-01-10]
Glycoproteomics and MS Proteomics [Service] Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Plasma extracellular vesicles reflect response and prognosis in patients with breast cancer undergoing neoadjuvant treatment.
Ekström K, Riaz N, Larsson K, ..., Linderholm B, Olofsson Bagge R
Breast Cancer Res. 28 (1) 22 [2026-01-09; online 2026-01-09]
Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Marine-Inspired Antimicrobial Peptides Disrupt Gene Expression at the DNA Level.
Beyer LI, Thoma J, Acha Alarcon L, ..., Inda-Díaz JS, Tietze AA
ACS Infect Dis 12 (1) 447-459 [2026-01-09; online 2025-12-09]
Glycoproteomics and MS Proteomics [Service]
PubMed DOI Crossref
Long-read genome sequencing enhances diagnostics of pediatric neurological disorders.
Ek M, Kvarnung M, Ten Berk de Boer E, ..., Eisfeldt J, Lindstrand A
Genome Med 18 (1) 12 [2026-01-09; online 2026-01-09]
Clinical Genomics [Service] Clinical Genomics Stockholm [Service]
PubMed DOI Crossref
Engineering affibody domains as anti-idiotypic masks for nivolumab-based prodrugs.
Mestre Borras A, Mehari H, Ståhl S, Löfblom J
Protein Eng. Des. Sel. 39 (-) - [2026-01-09; online 2026-04-16]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Combining bacterial display and protein language models to engineer a CD69-binding affibody for molecular imaging of immune activation.
Olsson H, Westerberg C, Persson J, ..., Ståhl S, Löfblom J
Protein Eng. Des. Sel. 39 (-) - [2026-01-09; online 2026-06-11]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Cellular immune endophenotypes separating early and late-onset myasthenia gravis.
Theorell J, Ruffin N, Fower A, ..., Handel AE, Piehl F
JCI Insight 11 (1) - [2026-01-09; online 2025-11-27]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
CXCR5 identifies stem-like resident memory CD8⁺ T cells enriched for latent EBV specificity in tonsils.
Rivera Ballesteros O, Rieble L, Cai C, ..., Price DA, Buggert M
Sci Adv 12 (2) eady8316 [2026-01-09; online 2026-01-07]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Quantitative optical nanoscopy of mitochondrial-derived vesicles in neurons classifies pre-peroxisomal and clearing organelles.
Coceano G, Alvelid J, Damenti M, ..., Rorbach J, Testa I
Nat Commun 17 (1) 419 [2026-01-08; online 2026-01-08]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Tirzepatide reduces alcohol drinking and relapse-like behaviours in rodents.
Edvardsson CE, Adermark L, Gottlieb S, ..., Becker HC, Jerlhag E
EBioMedicine 124 (-) 106119 [2026-01-07; online 2026-01-07]
Glycoproteomics and MS Proteomics [Collaborative]
PubMed DOI Crossref
Single-Cell Omics Analysis of Human Basophils Reveals Two Transcriptionally Distinct Populations.
Papavasileiou S, Mo J, Boey D, ..., Nilsson G, Dahlin JS
Allergy - (-) - [2026-01-07; online 2026-01-07]
NGI Long read [Collaborative] NGI Short read [Service] NGI Single cell [Collaborative] NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Inflammatory protein profiles and shunt response in iNPH
Braun M, Ekblom M, Freyhult E, ..., Kultima K, Virhammar J
Fluids Barriers CNS 23 (1) 5 [2026-01-07; online 2026-01-07]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Conference report: The Third Bacterial Genome Sequencing Pan-European Network conference.
Liuta N, Bertelli C, Birkeland KW, ..., Egli A, European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Study Group for Genomic and Molecular Diagnostics (ESGMD)
FEMS Microbiol. Lett. 373 (-) - [2026-01-07; online 2026-09-09]
Clinical Genomics [Technology development] Clinical Genomics Örebro [Technology development]
PubMed DOI Crossref
TGFβ signaling mediates microglial resilience to spatiotemporally restricted myelin degeneration.
Zhu K, Liu Y, Min JH, ..., Harris RA, Lund H
Nat. Neurosci. - (-) - [2026-01-02; online 2026-01-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genome Shows no Recent Inbreeding in Near-Extinction Woolly Rhinoceros Sample Found in Ancient Wolf's Stomach.
Guðjónsdóttir SM, Lord E, Pochon Z, ..., Dalén L, Chacón-Duque JC
Genome Biol Evol 18 (1) - [2026-01-02; online 2026-01-14]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Acute high-dose irradiation disrupts cell adhesion and Silk-Ovarioid formation in human primary ovarian cells
Deligiannis SP, Li T, Moussaud-Lamodière E, ..., Salumets A, Di Nisio V
J Ovarian Res 19 (1) - [2026-01-02; online 2026-01-02]
NGI Short read NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Elevated acute-phase plasma levels of S100A12 [EN-RAGE] are associated with vascular recurrence after ischemic stroke.
Granelli B, Angerfors A, Furutjäll S, ..., Stanne TM, Jern C
Eur Stroke J 11 (1) - [2026-01-01; online 2026-01-30]
Clinical Genomics [Collaborative] Clinical Genomics Gothenburg [Collaborative]
PubMed DOI Crossref
Using Historic and Contemporary Genomes to Assess the Genetic Consequences of a Population Decline in an Endangered Tern Population.
Schnelle A, Rollins RE, Müller IA, ..., Bouwhuis S, Liedvogel M
Evol Appl 19 (1) e70192 [2026-01-00; online 2026-01-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Spatial Transcriptomic Assessments of Gene Expression Profiles in Human Peri-Implant Lesions.
Dionigi C, Ericson AC, Shikhan A, Larsson L, Berglundh T
J Clin Periodontol 53 (1) 137-151 [2026-01-00; online 2025-10-12]
Clinical Genomics [Service] Clinical Genomics Gothenburg [Service] NGI Spatial omics [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Phosphorus acquisition among planktonic microbial communities across a salinity gradient.
Mollica T, Lindehoff E, Lundin D, ..., Farnelid H, Legrand C
ISME COMMUN. 6 (1) ycag249 [2026-01-00; online 2026-09-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Long-term heating differently impacts diversity and seasonal dynamics of prokaryotes and micro-eukaryotes in Baltic Sea coastal biofilm communities.
Svendsen IK, Rula I, Nilsson E, ..., Forsman A, Salis RK
ISME COMMUN. 6 (1) ycag101 [2026-01-00; online 2026-04-14]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Long-term ecosystem development and retrogression drive microbial specialization for complex organic matter degradation.
Modolon F, Capo E, Wardle DA
ISME COMMUN. 6 (1) ycag157 [2026-01-00; online 2026-06-07]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Inhibitory effect of oestradiol on the cardiac KV7.1/KCNE1 channel is species dependent.
Linhart VA, Dauga L, Liin SI
Exp. Physiol. 111 (1) 54-68 [2026-01-00; online 2025-05-05]
Clinical Genomics [Service] Clinical Genomics Linköping [Service]
DOI Crossref
High N2 fixation rates in mycorrhizal tubercles on pine roots
Xu W, Mahmood S, Lindahl B, Spohn M
Geoderma 465 (-) 117643 [2026-01-00; online 2026-01-00]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genetic risk factors and clinical manifestations of systemic lupus erythematosus: Large-scale analysis of genetic predisposition and disease subtypes.
Reid S, Sandling JK, Pucholt P, ..., Rönnblom L, Leonard D
J. Intern. Med. 299 (1) 95-108 [2026-01-00; online 2025-11-07]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Exploring the Substitution of the C21-OAc Moiety in [11]Cytochalasans: Synthesis and Evaluation of Fluorophore Conjugates.
Kagho MD, Schmidt K, Chakrabarti A, ..., Stradal TE, Klahn P
ChemBioChem 27 (1) e202500794 [2026-01-00; online 2025-11-27]
Glycoproteomics and MS Proteomics [Service]
PubMed DOI Crossref
Dynamic interaction of the Yersinia pseudotuberculosis type three secretion system proteins LcrV and LcrG.
Mangu JCK, Rogne P, Mattsson J, ..., Francis MS, Wolf-Watz M
Protein Sci. 35 (1) e70400 [2026-01-00; online 2025-12-22]
Structural Proteomics [Collaborative] Swedish NMR Centre [Service]
PubMed DOI Crossref
Diet composition and environmental niche drive parasitic Syndiniales interactions with crustacean zooplankton.
Hanström N, Jan KMG, Serandour B, Xu T, Winder M
ISME COMMUN. 6 (1) ycaf248 [2026-01-00; online 2025-12-24]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Consistent Species Richness Patterns but Not Richness Estimates Based on Both ASV and OTU Inference Methods on ITS2 ‐Based Soil Fungal Communities
Kyaschenko J, Tångrot J, Dahlberg A, Lindahl BD, Rosling A
Environmental DNA 8 (1) - [2026-01-00; online 2026-01-26]
NGI Long read [Service] NGI Uppsala (Uppsala Genome Center) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Co-exposure to PFAS and hydroxylated PCBs is associated with increased odds of multiple sclerosis
Vaivade A, Sreenivasan AP, Erngren I, ..., Burman J, Kultima K
Environment International 207 (-) 109993 [2026-01-00; online 2026-01-00]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Cellular Hallmarks From Volume Electron Microscopy Reveal Developmental Progression of Plasmodium Ookinetes.
Darif N, Rheinnecker M, Hildenbrand K, ..., Schwab Y, Frischknecht F
Adv Sci (Weinh) 13 (4) e08250 [2026-01-00; online 2025-09-30]
Integrated Microscopy Technologies Umeå [Collaborative]
PubMed DOI Crossref
Benchmarking of single nuclei RNA-seq methods on human post-mortem brain tissue
Nikouei K, Gruyters E, Memic F, Stockmeier CA, Hjerling-Leffler J
Genomics 118 (1) 111184 [2026-01-00; online 2026-01-00]
NGI Short read NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Niobium-oxide-based octahedral molecular sieves as novel anode materials for sodium-ion batteries
Rao YB, Tavajohi N, Ohlin CA
Mater. Adv. 7 (3) 1691-1703 [2026-00-00; online 2026-00-00]
Integrated Microscopy Technologies Umeå [Service]
DOI Crossref
Electron Tomography-Based Reconstruction of Extracellular Vesicles in Tissue
Micaroni M, Berndtsson J, Urzì O, Crescitelli R
- - (-) 321-336 [2026-00-00; online 2026-01-23]
Integrated Microscopy Technologies Gothenburg [Technology development]
SciLifeLab Data Centre
Publications 9.5.2