Publications 2026

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86 publications

DOI Crossref
Process development and pilot-scale validation of γ-valerolactone pretreatment for softwood biorefining
Dixit P, Benavente V, Gustafsson T, ..., Jönsson LJ, Martín C
Biomass and Bioenergy 208 (-) 108846 [2026-05-00; online 2026-05-00]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Longitudinal protein profiling of blood during childhood into early adulthood.
Bergström S, Björkander S, Bueno Álvez M, ..., Nilsson P, Melén E
Nat Commun 17 (1) - [2026-04-22; online 2026-04-22]
NGI Proteomics [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
RUVBL1 and RUVBL2 are druggable MYC effector regulators in neuroblastoma cells.
Siaw JT, Claeys A, Lai WY, ..., Palmer RH, Van den Eynden J
iScience 29 (4) 115236 [2026-04-17; online 2026-03-05]
NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Minor hemolysin-coregulated proteins (Hcp) form heteromeric complexes and mediate effector secretion in Bacteroidales type VI secretion systems.
San-Miguel SG, Hillier JB, Saleh Al-Ammari MK, ..., Uhlin BE, Cisneros DA
J. Biol. Chem. - (-) 111464 [2026-04-16; online 2026-04-16]
Structural Proteomics [Service]
PubMed DOI Crossref
Dimethyl Fumarate, But Not Rituximab, Reduces Serum GFAP Levels and PIRMA in Relapsing–Remitting MS
Shawket F, Lycke J, Salzer J, ..., Burman J, Svenningsson A
Ann Clin Transl Neurol - (-) - [2026-04-12; online 2026-04-12]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
TNFα signaling in radiation-induced chronic bowel dysfunction suggests therapeutic potential for IBD biologics
Devarakonda S, Patel P, Toft Morén A, ..., Villablanca EJ, Bull C
Mol. Med. 32 (1) - [2026-04-09; online 2026-04-09]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Lectin pathway of complement in SLE: MAP-1 as a marker of haematological manifestations and elevated type I interferon activity.
Lindelöf L, Garred P, Hong MG, ..., Svenungsson E, Eriksson O
Lupus Sci Med 13 (1) - [2026-04-09; online 2026-04-09]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Single-cell analysis of inhibitory efferent neurons of the zebrafish lateral line.
Manuel R, Ahemaiti A, Tuz-Sasik MU, Boije H
PLoS ONE 21 (4) e0346255 [2026-04-08; online 2026-04-08]
Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service]
PubMed DOI Crossref
Proviral NUP153 binding to viral proteins and RNA regulates structural-nonstructural protein ratios in orthoflavivirus infection.
Peters MBA, Lindqvist R, Kassa E, ..., Lundmark R, Överby AK
Nat Commun - (-) - [2026-04-08; online 2026-04-08]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Neoadjuvant palbociclib and endocrine therapy versus chemotherapy in ER + /HER2- breast cancer: a randomized phase II trial.
Matikas A, Tzoras E, Sarafidis M, ..., Hatschek T, Foukakis T
Nat Commun 17 (1) - [2026-04-08; online 2026-04-08]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Generalist phyllosphere taxa dominate microbial communities on macrophytes across a natural salinity gradient
Herlemann DPR, Riedinger DJ, Fenández-Juárez V, ..., Rakowski M, Labrenz M
Environ Microbiome 21 (1) - [2026-04-04; online 2026-04-04]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Limosilactobacillus reuteri metabolites modulate immune pathways and intestinal barrier repair after 5 fluorouracil exposure.
Lasaviciute G, López Plana M, Sundberg Örtegren S, ..., Mata Forsberg M, Sverremark-Ekström E
Sci Rep 16 (1) - [2026-04-02; online 2026-04-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Single-Cell Triomics Analysis of Tumor Cells Infiltrating Patient-Derived Breast Cancer Scaffolds
Filges S, Jonasson E, Leiva Arrabal MDC, ..., Ruff D, Ståhlberg A
Am. J. Pathol. 196 (4) 1016-1027 [2026-04-00; online 2026-04-00]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Pre-diagnostic and diagnostic D-vitamin levels and risk of bladder cancer - A nested case-control study with follow-up at diagnosis
Hultdin J, Tellström A, Freyhult E, Landström M, Ljungberg B
Clinical Nutrition Open Science - (-) 100658 [2026-04-00; online 2026-04-00]
Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Contrasting population genomic structuring of northern pike ( Esox lucius L.) in fresh‐ and brackish water environments: Implications for management and conservation
Diaz‐Suarez A, López M, Sundblad G, Vasemägi A
J. Fish Biol. - (-) - [2026-03-30; online 2026-03-30]
NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Tumor-infiltrating immature innate lymphoid cells in colorectal cancer are biased toward ILC1/tissue-resident NK cell differentiation.
Marchalot A, Ljunggren M, Stamper C, ..., Nordenvall C, Mjösberg J
Nat Commun 17 (1) - [2026-03-27; online 2026-03-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Analysis of medieval burials from Ibiza reveals genetic and pathogenic diversity during the Islamic period.
Rodríguez-Varela R, Pochon Z, Mas-Sandoval A, ..., Schlebusch CM, Götherström A
Nat Commun 17 (1) - [2026-03-26; online 2026-03-26]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Temporal genomics reveals widespread but unexpected consequences of a bottleneck in the Scandinavian brown bear
Lindahl A, Lord E, Chacón-Duque JC, ..., Dalén L, Feinauer IS
R. Soc. open sci. 13 (3) - [2026-03-25; online 2026-03-25]
Ancient DNA [Collaborative] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Centromeric instability and chromoanasynthesis observed in nine supernumerary marker chromosomes resolved with long-read genome sequencing
Bilgrav Saether K, Salazar Mantero A, Ek M, ..., Eisfeldt J, Lindstrand A
Genome Res. 36 (4) 661-670 [2026-03-25; online 2026-03-25]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Studying Macromolecular Composition in Cell-Cell Interfaces Using 3D Membrane Reconstitution Systems.
Ragaller F, Schneider AM, Sjule E, ..., Achour A, Sezgin E
Adv Sci (Weinh) - (-) e22443 [2026-03-24; online 2026-03-24]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Ribonuclease 4 Functions in Nociceptor-Mediated Nerve Homeostasis.
Feng X, Zhang K, Techameena P, ..., Gurumurthy CB, Hadjab S
Nat Commun 17 (1) - [2026-03-24; online 2026-03-24]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Avoiding Mitochondrial Apoptosis by the Bcl-2-Driven Bax Oligomerization on Membrane Surfaces
Ayscough SE, Clifton LA, Ådén J, ..., Wacklin-Knecht HP, Gröbner G
ACS Chem. Biol. 21 (3) 565-576 [2026-03-20; online 2026-02-18]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Transcription factor NFYA directs male meiotic entry by regulating accessible chromatin at meiotic promoters in mice
Säflund M, Askari M, Eghbali A, ..., Yu T, Özata DM
EMBO J. - (-) - [2026-03-19; online 2026-03-19]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Single-nucleus epigenomic profiling of the adult human central nervous system unveils epigenetic memory of developmental programs.
Kabbe M, Agirre E, Carlström KE, ..., Williams A, Castelo-Branco G
Nat. Neurosci. - (-) - [2026-03-19; online 2026-03-19]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Sex chromosome evolution mediated by a large inversion and a possible switch of the sex determination gene.
Mao X, Rafati N, Tellgren-Roth C, Ingvarsson PK, Karrenberg S
Genome Biol. - (-) - [2026-03-19; online 2026-03-19]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Mapping the human chemical exposome for public health
David A, Lennon S, Mercier F, ..., Le Bizec B, Samson M
Nat Med - (-) - [2026-03-18; online 2026-03-18]
Exposomics [Collaborative]
PubMed DOI Crossref
FGFR signaling establishes spatial gradients of secretory cell identities along the airway proximal-distal axis.
Sountoulidis A, Theelke J, Liontos A, ..., Bellusci S, Samakovlis C
Nat Commun 17 (1) - [2026-03-18; online 2026-03-18]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The population structure in the Baltic herring reflects natural selection and local adaptation.
Goodall J, Pettersson ME, Andersson A, ..., Andersson L, Laikre L
Proc. Natl. Acad. Sci. U.S.A. 123 (11) e2526500123 [2026-03-17; online 2026-03-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genomic identification and complete mitochondrial recovery of a Late Holocene porcupine (Erethizon dorsatum) mummy from Yukon permafrost
Selvatici S, Jin C, Zazula G, ..., Díez-del-Molino D, Oteo-García G
Sci Rep 16 (1) - [2026-03-17; online 2026-03-17]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Paralog-aware assembly and filtering strategies reveal minimal nucleotide variation on the macro germline-restricted chromosome of the zebra finch.
Chen A, Ruiz-Ruano FJ, Contreras-López O, ..., Suh A, Pei Y
Heredity (Edinb) - (-) - [2026-03-16; online 2026-03-16]
NGI Other [Service] NGI Short read [Service] NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Persistent interferon signaling causes sensory neuron plasticity and pain before and during arthritis.
Su J, Zhang MD, Kupari J, ..., Holmdahl R, Ernfors P
Nat. Neurosci. - (-) - [2026-03-10; online 2026-03-10]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Whole genomes reveal subpopulations and isolation-by-distance patterns in the Norwegian lemming
Feinauer IS, Ravasini F, Lagerholm VK, ..., Angerbjörn A, Dalén L
BMC Biol. - (-) - [2026-03-06; online 2026-03-06]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The HUNT study identifies host genetic factors reproducibly associated with human gut microbiota composition
Moksnes MR, Coward E, Nethander M, ..., Hveem K, Ohlsson C
Nat Genet 58 (3) 530-539 [2026-03-00; online 2026-02-13]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Resource Availability Modulates Gene Expression Across Life Stages in a Migratory Butterfly.
Shipilina D, Höök L, Näsvall K, ..., Talavera G, Backström N
Mol. Ecol. 35 (5) e70293 [2026-03-00; online 2026-03-09]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Mycelial biomass growth stage at death determines fungal necromass decay dynamics
Maillard F, Lopes Ramos D, Zhang B, ..., Persson P, Tunlid A
Soil Biology and Biochemistry 214 (-) 110079 [2026-03-00; online 2026-03-00]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Genome-wide association analyses highlight the role of the intestinal molecular environment in human gut microbiota variation.
Dekkers KF, Pertiwi K, Baldanzi G, ..., Orho-Melander M, Fall T
Nat. Genet. 58 (3) 540-549 [2026-03-00; online 2026-02-13]
NGI SNP genotyping [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
DOI Crossref
Evolution of hydration in cement blends with incorporation of activated low-kaolinite clays: Insights into the preferred aluminum uptake by C-(A)-S-H
Hazarika A, Huang L, Figueira J, Babaahmadi A
Cement and Concrete Research 201 (-) 108086 [2026-03-00; online 2026-03-00]
Swedish NMR Centre [Collaborative]
PubMed DOI Crossref
Enrichment of Neural Crest Cells by Antibody Labeling and Flow Cytometry for Single-Cell Transcriptomics in a Lizard.
Pranter R, Patthey C, Feiner N
Evol Dev 28 (1) e70030 [2026-03-00; online 2026-02-19]
NGI Short read [Service] NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Discovering and protecting cryptic biodiversity: A case study of a previously undescribed, vulnerable bird species in Japan.
Saitoh T, Shipilina D, Xia C, ..., Olsson U, Alström P
PNAS Nexus 5 (3) pgag037 [2026-03-00; online 2026-03-17]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
An Equatorial Hemispheric Barrier Shapes the Diversification of Migratory Belenois Butterflies.
Janiczek A, Palahí A, Dapporto L, ..., Suchan T, Talavera G
Mol. Ecol. 35 (6) e70310 [2026-03-00; online 2026-03-20]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Novel activating SNRNP70-ALK fusion in congenital infant-type hemispheric glioma displays clinical response to lorlatinib: a case-report
Arthur C, Georgantzi K, de Ståhl TD, ..., Palmer R, Tham E
NPJ Precis Oncol 10 (1) - [2026-02-26; online 2026-02-26]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
The N-Myc MB0-MBI region interacts specifically and dynamically with the N-lobe of Aurora kinase A.
Hultman J, Morad V, Tanner E, ..., Ahlner A, Sunnerhagen M
Nat Commun 17 (1) - [2026-02-24; online 2026-02-24]
Structural Proteomics [Collaborative]
PubMed DOI Crossref
Silicone-Foam Passive Air Samplers for Combined Target and Nontarget Chemical Profiling and Toxicity Assessment of Airborne Exposomes
Sunyer-Caldú A, Xie H, Bonnefille B, ..., Papazian S, Martin JW
Environ. Sci. Technol. 60 (7) 5628-5644 [2026-02-24; online 2026-02-10]
Exposomics [Technology development]
PubMed DOI Crossref
Lipid‐Facilitated Opening of the ADAM10 Sheddase Revealed by Enhanced Sampling Simulations
Schahl A, Haloi N, Carroni M, ..., Delemotte L, Howard RJ
Adv Sci (Weinh) - (-) e15713 [2026-02-24; online 2026-02-24]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Distinct radial glia subtypes regulate midbrain dopaminergic neuron development.
Ásgrímsdóttir ES, Bassini LF, Sun T, ..., Toledo EM, Arenas E
Nat. Neurosci. - (-) - [2026-02-16; online 2026-02-16]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Exploring microbial diversity using cell-size fractionated enrichment incubations from subsurface aquifers at Äspö, Sweden.
Westmeijer G, Turner S, Hevele P, ..., Bertilsson S, Dopson M
Commun Biol - (-) - [2026-02-14; online 2026-02-14]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Rare germline variants contribute to glioma predisposition: Whole-genome analysis of a regional cohort of glioma patients.
Rosenbaum A, Wibom C, Hammermeister Suger A, ..., Dahlin AM, Melin B
Neurooncol Adv 8 (1) vdag038 [2026-02-12; online 2026-02-12]
NGI Short read [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Spatial overlap and temporal synchrony between guilds of insect hosts and parasitoids
van Dijk LJA, Goodsell RM, Andersson AF, ..., Roslin T, Tack AJM
Journal of Animal Ecology - (-) - [2026-02-10; online 2026-02-10]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genome Sequencing in 19 Families With Bladder Exstrophy and Epispadias Complex Indicates Involvement of the ADGR-Gene Family.
Nordenskjöld A, Alm S, Eisfeldt J, ..., Lindstrand A, Lagerstedt-Robinson K
Am. J. Med. Genet. A - (-) - [2026-02-10; online 2026-02-10]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
MYC modulates TOP2A diffusion to promote substrate detection and activity
Cameron DP, Jackson K, Loffreda A, ..., Mazza D, Baranello L
Nat Commun 17 (1) - [2026-02-09; online 2026-02-09]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Targeted CSF metabolomics and conformal prediction improve diagnostic accuracy of normal pressure hydrocephalus.
Hofling U, Jakobsson J, Erngren I, ..., Kultima K, Virhammar J
Fluids Barriers CNS 23 (1) - [2026-02-07; online 2026-02-07]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Molecular interactome of HNRNPU reveals regulatory networks in neuronal differentiation and DNA methylation.
Oksanen M, Mastropasqua F, Mazan-Mamczarz K, ..., Gorospe M, Tammimies K
Nucleic Acids Res. 54 (4) - [2026-02-05; online 2026-02-12]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Dual-Color Expansion Microscopy of Membrane Proteins Using Bioorthogonal Labeling
Edwards S, Meineke B, Bauer S, ..., Elsässer S, Brismar H
Nano Lett. 26 (4) 1321-1326 [2026-02-04; online 2026-01-22]
Integrated Microscopy Technologies Stockholm [Technology development]
PubMed DOI Crossref
Mechanistic insights into PCBP1-driven unfolding of selected i-motif DNA at G1/S checkpoint.
Sengupta P, Gillet N, Obi I, Sabouri N
Nat Commun 17 (1) 1149 [2026-02-02; online 2026-02-02]
Swedish NMR Centre [Service]
PubMed DOI Crossref
Warming Causes a Decline in Baltic Sea Coastal Sediment Microbial Abundance.
Seidel L, Li S, Hanna-Elias S, ..., Ketzer M, Dopson M
Environ. Microbiol. 28 (2) e70256 [2026-02-00; online 2026-02-19]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Exploration of immune phenotypes in self-sampling citizens
Dahl L, Bendes A, Álvez MB, ..., Roxhed N, Schwenk JM
iScience 29 (2) 114611 [2026-02-00; online 2026-02-00]
NGI Short read [Collaborative] NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Collaborative]
DOI Crossref
Experimental and machine learning-based exploration of repurposed drugs reveals chemical features underlying phospholipidosis
Kuzikov M, Kalman A, Karki R, ..., Gribbon P, Zaliani A
Patterns - (-) 101453 [2026-02-00; online 2026-02-00]
Chemical Biology Consortium Sweden [Collaborative]
PubMed DOI Crossref
SOX21 suppresses glioblastoma growth by repressing AP-1 activity
Rrapaj E, Yuan J, Kurtsdotter I, ..., Bergsland M, Muhr J
Cell Death Dis 17 (1) 191 [2026-01-31; online 2026-01-31]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Comprehensive profiling of CRISPR/dCas9 epigenome editors indicates a complex link between on and off target effects
Pahlevan Kakhki M, Rangani F, Ewing E, ..., Kular L, Jagodic M
Genome Biol. 27 (1) - [2026-01-31; online 2026-01-31]
NGI SNP genotyping [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] NGI Uppsala (SNP&SEQ Technology Platform) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Skeletal Muscle Microbiopsies in Children and Adults-Tolerability, Sample Yield, and Analyzability.
Högelin ER, Edman S, Jannig PR, ..., von Walden F, Fornander L
Muscle Nerve - (-) - [2026-01-30; online 2026-01-30]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Allergen-specific human IgE isolated through an allergen-agnostic pipeline—understanding immune response and allergen recognition
Thörnqvist L, Franciskovic E, Godzwon M, ..., Levander F, Ohlin M
Commun Biol 9 (1) - [2026-01-28; online 2026-01-28]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
DOI Crossref
A study of k-mer patterns within DNA molecules sequenced from a chondrite
Farage C, Bachelet I
- - (-) - [2026-01-27; online 2026-01-27]
Ancient DNA [Service]
PubMed DOI Crossref
Effects of incrementally increased plant-based protein intake on gut microbiota and inflammatory-metabolic biomarkers in healthy adults.
Prado S, Kamm A, Dannenberg K, ..., Marques TM, Brummer RJ
Food Funct 17 (2) 942-956 [2026-01-26; online 2026-01-26]
Clinical Genomics [Collaborative] Clinical Genomics Örebro [Collaborative]
PubMed DOI Crossref
NUP98 regulates orthoflavivirus replication through interaction with vRNA and can be targeted for antiviral purposes.
Peters MBA, Lindqvist R, Madhu P, ..., Ivarsson Y, Överby AK
Nucleic Acids Res. 54 (3) - [2026-01-22; online 2026-01-27]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Anoctamin-2-specific T cells link Epstein-Barr virus to multiple sclerosis.
Thomas OG, Rykaczewska U, Galešić M, ..., Guerreiro-Cacais AO, Olsson T
Cell 189 (2) 585-602.e38 [2026-01-22; online 2026-01-13]
Autoimmunity and Serology Profiling [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
Genetiska släktskapsanalyser och individerna från Riddarholmskyrkan (Magnus Ladulås grav: om sökandet i Riddarholmskyrkan)
Malmström H
- - (-) - [2026-01-21]
Ancient DNA [Service]
DOI Crossref
Integrative Epigenomic and Transcriptomic Profiling Define Malignancy- and Cluster-Specific Signatures in Pheochromocytomas and Paragangliomas
Tabebi M, Łysiak M, Gimm O, Söderkvist P
Cells 15 (2) 198 [2026-01-20; online 2026-01-20]
Clinical Genomics [Service] Clinical Genomics Linköping [Collaborative]
Results of Archaeological Research on Burials at St. George’s Church in Gokhnari
Sulkhanishvili D, Ioramashvili S, Mshvildadze M, Goguadze D, Burjanadze G
Chronos 6 (-) 220–246 [2026-01-15; online 2026-01-15]
Ancient DNA [Service]
PubMed DOI Crossref
Metabolic interactions between bacterial co-isolates from catheter-associated urinary tract infections
Sokol D, Rzhepishevska O, Marynova I, ..., Antti H, Ramstedt M
Sci Rep 16 (1) 2061 [2026-01-14; online 2026-01-14]
Chemical Biology Consortium Sweden [Service]
PubMed DOI Crossref
Dealing with phosphorus deficiency: contrasting strategies in marine phytoplankton and bacteria
Delgadillo-Nuño E, Teira E, Fernández E, ..., Pinhassi J, Martínez-García S
ISME COMMUN. 6 (1) ycag035 [2026-01-14; online 2026-02-20]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
A combinatorial transcription factor screening platform for immune cell reprogramming.
Kurochkin I, Altman AR, Caiado I, ..., Theis FJ, Pereira CF
Cell Syst - (-) 101457 [2026-01-14; online 2026-01-14]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Structural basis for late maturation steps of mitochondrial respiratory chain complex IV within the human respirasome.
Nguyen MD, Sierra-Magro A, Singh V, ..., Barrientos A, Rorbach J
Nat Commun - (-) - [2026-01-10; online 2026-01-10]
Cryo-EM [Service]
PubMed DOI Crossref
Proteomic and Lipidomic Profiling of Immune Cell‐Derived Subpopulations of Extracellular Vesicles
Lischnig A, Karimi N, Larsson P, ..., Olin A, Lässer C
Proteomics - (-) e70096 [2026-01-10; online 2026-01-10]
Glycoproteomics and MS Proteomics [Service] Integrated Microscopy Technologies Gothenburg [Service]
PubMed DOI Crossref
Marine-Inspired Antimicrobial Peptides Disrupt Gene Expression at the DNA Level.
Beyer LI, Thoma J, Acha Alarcon L, ..., Inda-Díaz JS, Tietze AA
ACS Infect Dis 12 (1) 447-459 [2026-01-09; online 2025-12-09]
Glycoproteomics and MS Proteomics [Service]
PubMed DOI Crossref
Quantitative optical nanoscopy of mitochondrial-derived vesicles in neurons classifies pre-peroxisomal and clearing organelles.
Coceano G, Alvelid J, Damenti M, ..., Rorbach J, Testa I
Nat Commun 17 (1) 419 [2026-01-08; online 2026-01-08]
Integrated Microscopy Technologies Stockholm [Service]
PubMed DOI Crossref
Tirzepatide reduces alcohol drinking and relapse-like behaviours in rodents.
Edvardsson CE, Adermark L, Gottlieb S, ..., Becker HC, Jerlhag E
EBioMedicine 124 (-) 106119 [2026-01-07; online 2026-01-07]
Glycoproteomics and MS Proteomics [Collaborative]
PubMed DOI Crossref
Single-Cell Omics Analysis of Human Basophils Reveals Two Transcriptionally Distinct Populations.
Papavasileiou S, Mo J, Boey D, ..., Nilsson G, Dahlin JS
Allergy - (-) - [2026-01-07; online 2026-01-07]
NGI Long read [Collaborative] NGI Short read [Service] NGI Single cell [Collaborative] NGI Stockholm (Genomics Applications) [Collaborative] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Inflammatory protein profiles and shunt response in iNPH
Braun M, Ekblom M, Freyhult E, ..., Kultima K, Virhammar J
Fluids Barriers CNS 23 (1) 5 [2026-01-07; online 2026-01-07]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
TGFβ signaling mediates microglial resilience to spatiotemporally restricted myelin degeneration.
Zhu K, Liu Y, Min JH, ..., Harris RA, Lund H
Nat. Neurosci. - (-) - [2026-01-02; online 2026-01-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Genome Shows no Recent Inbreeding in Near-Extinction Woolly Rhinoceros Sample Found in Ancient Wolf's Stomach.
Guðjónsdóttir SM, Lord E, Pochon Z, ..., Dalén L, Chacón-Duque JC
Genome Biol Evol 18 (1) - [2026-01-02; online 2026-01-14]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Acute high-dose irradiation disrupts cell adhesion and Silk-Ovarioid formation in human primary ovarian cells
Deligiannis SP, Li T, Moussaud-Lamodière E, ..., Salumets A, Di Nisio V
J Ovarian Res 19 (1) - [2026-01-02; online 2026-01-02]
NGI Short read NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Using Historic and Contemporary Genomes to Assess the Genetic Consequences of a Population Decline in an Endangered Tern Population.
Schnelle A, Rollins RE, Müller IA, ..., Bouwhuis S, Liedvogel M
Evol Appl 19 (1) e70192 [2026-01-00; online 2026-01-02]
NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
PubMed DOI Crossref
Exploring the Substitution of the C21-OAc Moiety in [11]Cytochalasans: Synthesis and Evaluation of Fluorophore Conjugates.
Kagho MD, Schmidt K, Chakrabarti A, ..., Stradal TE, Klahn P
ChemBioChem 27 (1) e202500794 [2026-01-00; online 2025-11-27]
Glycoproteomics and MS Proteomics [Service]
PubMed DOI Crossref
Dynamic interaction of the Yersinia pseudotuberculosis type three secretion system proteins LcrV and LcrG.
Mangu JCK, Rogne P, Mattsson J, ..., Francis MS, Wolf-Watz M
Protein Sci. 35 (1) e70400 [2026-01-00; online 2025-12-22]
Structural Proteomics [Collaborative] Swedish NMR Centre [Service]
PubMed DOI Crossref
Co-exposure to PFAS and hydroxylated PCBs is associated with increased odds of multiple sclerosis
Vaivade A, Sreenivasan AP, Erngren I, ..., Burman J, Kultima K
Environment International 207 (-) 109993 [2026-01-00; online 2026-01-00]
Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]
PubMed DOI Crossref
Benchmarking of single nuclei RNA-seq methods on human post-mortem brain tissue
Nikouei K, Gruyters E, Memic F, Stockmeier CA, Hjerling-Leffler J
Genomics 118 (1) 111184 [2026-01-00; online 2026-01-00]
NGI Short read NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]
SciLifeLab Data Centre
Publications 9.5.1