Bioinformatic processing of RAD-seq data dramatically impacts downstream population genetic inference

Shafer ABA, Peart CR, Tusso S, Maayan I, Brelsford A, Wheat CW, Wolf JBW

Methods Ecol Evol 8 (8) 907-917 [2017-08-00; online 2016-11-28]

Bioinformatics Compute and Storage [Service]

NGI Uppsala (SNP&SEQ Technology Platform) [Service]

QC bibliography QC xrefs

DOI 10.1111/2041-210x.12700

Crossref 10.1111/2041-210x.12700

GCF_000321225.1 [https://www.ncbi.nlm.nih.gov/assembly/GCF_000321225.1/]

GCF_000349705.1 [https://www.ncbi.nlm.nih.gov/assembly/GCF_000349705.1/]

BioProject PRJNA349123 [Galapagos sea lion resequencing]

Dryad https://doi.org/10.5061/dryad.8kn8c.2 [Data from: A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them]

Dryad https://doi.org/10.5061/dryad.q14c1 [Data from: Bioinformatic processing of RAD-seq data dramatically impacts downstream population genetic inference]