SciLifeLab Infrastructure Units Publications

Publications by year

The 20 most recent publications

Shared requirement for MYC upstream super-enhancer region in tissue regeneration and cancer.

Sur I, Zhao W, Zhang J, ..., de la Roche M, Taipale J

Life Sci. Alliance 8 (6) - [2025-06-00; online 2025-04-03]

NGI Single cell [Service] NGI Stockholm (Genomics Applications) [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Conformal prediction enables disease course prediction and allows individualized diagnostic uncertainty in multiple sclerosis.

Sreenivasan AP, Vaivade A, Noui Y, ..., Spjuth O, Kultima K

NPJ Digit Med 8 (1) 224 [2025-04-24; online 2025-04-24]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

PubMed DOI Crossref

Structural mechanism of FusB-mediated rescue from fusidic acid inhibition of protein synthesis.

González-López A, Ge X, Larsson DSD, ..., Sanyal S, Selmer M

Nat Commun 16 (1) 3693 [2025-04-18; online 2025-04-18]

Cryo-EM [Service]

PubMed DOI Crossref

Challenging the "Undruggable"─Targeting STAT3 but Identifying Potent TrkA-Targeted Inhibitors.

Iliev P, McCutcheon C, Admas TH, ..., Frank DA, Page BDG

J. Med. Chem. - (-) - [2025-04-17; online 2025-04-17]

Chemical Biology Consortium Sweden (CBCS) [Collaborative]

PubMed DOI Crossref

In vivo composition of the mitochondrial nucleoid in mice.

García-Villegas R, Odenthal F, Giannoula Y, ..., Levander F, Larsson NG

Biochimica et Biophysica Acta (BBA) - Molecular Cell Research - (-) 119955 [2025-04-15; online 2025-04-15]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

DOI Crossref

Antibacterial compounds against non-growing and intracellular bacteria

Kaldalu N, Bērziņš N, Berglund Fick S, ..., Hauryliuk V, Tenson T

npj Antimicrob Resist 3 (1) - [2025-04-11; online 2025-04-11]

Chemical Biology Consortium Sweden (CBCS) [Collaborative]

PubMed DOI Crossref

A red fluorescent lifeact marker to study actin morphology in podocytes.

Wiesner E, Binz-Lotter J, Tröder SE, ..., Wedlich-Söldner R, Hackl MJ

Sci Rep 15 (1) 12386 [2025-04-11; online 2025-04-11]

Integrated Microscopy Technologies Stockholm [Service]

PubMed DOI Crossref

Nuclear AGO2 supports influenza A virus replication through type-I interferon regulation.

Huang HC, Fong M, Nowak I, ..., Angeletti D, Sarshad AA

Nucleic Acids Res. 53 (7) - [2025-04-10; online 2025-04-12]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

DOI Crossref

Dual GSK-3β/HDAC Inhibitors Enhance the Efficacy of Macrophages to Control Mycobacterium tuberculosis Infection

Kalsum S, Xu R, Akber M, ..., Zhou Y, Brighenti S

Biomolecules 15 (4) 550 [2025-04-09; online 2025-04-09]

Chemical Biology Consortium Sweden (CBCS) [Collaborative]

PubMed DOI Crossref

Ectoderm barcoding reveals neural and cochlear compartmentalization.

de Haan S, He J, Corbat AA, ..., Kelley MW, Andersson ER

Science 388 (6742) 60-68 [2025-04-04; online 2025-04-03]

Bioinformatics (NBIS) [Collaborative] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative]

DOI Crossref

The Development of Selective Chemical Probes for Serine Arginine Protein Kinase 3

Hanke D, McCutcheon C, Page BDG

Chem Biol Drug Des 105 (4) - [2025-04-00; online 2025-04-03]

Chemical Biology Consortium Sweden (CBCS) [Collaborative]

PubMed DOI Crossref

Sex pheromone biosynthesis in the Oriental fruit moth Grapholita molesta involves Δ8 desaturation.

Dam MI, Ding BJ, Brauburger K, ..., Heckel DG, Löfstedt C

Insect Biochem. Mol. Biol. - (-) 104307 [2025-03-30; online 2025-03-30]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

The DNA methylation landscape of primary triple-negative breast cancer.

Aine M, Nacer DF, Arbajian E, ..., Borg Å, Staaf J

Nat Commun 16 (1) 3041 [2025-03-28; online 2025-03-28]

Clinical Genomics Lund [Service]

PubMed DOI Crossref

Phylogeny of Palicoureeae (Rubiaceae) based on 353 low-copy nuclear genes - With particular focus on Hymenocoleus Robbr.

Thilén L, Lachenaud O, Thureborn O, Razafimandimbison SG, Rydin C

Mol. Phylogenet. Evol. - (-) 108338 [2025-03-28; online 2025-03-28]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Cell membranes sustain phospholipid imbalance via cholesterol asymmetry.

Doktorova M, Symons JL, Zhang X, ..., Levental KR, Levental I

Cell - (-) - [2025-03-26; online 2025-03-26]

Integrated Microscopy Technologies Stockholm [Service]

PubMed DOI Crossref

Blood-based biomarkers of Alzheimer's disease and incident dementia in the community.

Grande G, Valletta M, Rizzuto D, ..., Fratiglioni L, Vetrano DL

Nat. Med. - (-) - [2025-03-26; online 2025-03-26]

Affinity Proteomics Stockholm [Collaborative]

PubMed DOI Crossref

Identification of a SNAI1 enhancer RNA that drives cancer cell plasticity.

Fan C, Wang Q, Krijger PHL, ..., de Laat W, Ten Dijke P

Nat Commun 16 (1) 2890 [2025-03-25; online 2025-03-25]

CRISPR Functional Genomics [Service]

PubMed DOI Crossref

Neural ensembles that encode nocifensive mechanical and heat pain in mouse spinal cord.

Zhang MD, Kupari J, Su J, ..., Lagerström MC, Ernfors P

Nat. Neurosci. - (-) - [2025-03-24; online 2025-03-24]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Intestinal estrogen receptor beta modulates the murine colon tumor immune microenvironment.

Birgersson M, Holm M, Gallardo-Dodd CJ, ..., Archer A, Williams C

Cancer Lett. - (-) 217661 [2025-03-20; online 2025-03-20]

NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]

PubMed DOI Crossref

Sox9 and nuclear factor I transcription factors regulate the timing of neurogenesis and ependymal maturation in dopamine progenitors.

Lahti L, Volakakis N, Gillberg L, ..., Gronostajski R, Perlmann T

Development 152 (6) - [2025-03-15; online 2025-03-26]

Bioinformatics (NBIS) [Service] Bioinformatics Support and Infrastructure [Service] Bioinformatics Support, Infrastructure and Training [Service] NGI Short read [Service] NGI Stockholm (Genomics Production) [Service] National Genomics Infrastructure [Service]