{"entity": "researcher", "timestamp": "2026-08-15T06:29:54.199Z", "family": "Modin", "given": "Oskar", "initials": "O", "orcid": "0000-0002-9232-6096", "affiliations": [], "links": {"self": {"href": "https://publications.scilifelab.se/researcher/e1cfa2dd97cc472c9307498a65b5a8c6.json"}, "display": {"href": "https://publications.scilifelab.se/researcher/e1cfa2dd97cc472c9307498a65b5a8c6"}}, "publications": [{"entity": "publication", "iuid": "8d17e70e0b5b4f70bad804ace9812eb2", "links": {"self": {"href": "https://publications.scilifelab.se/publication/8d17e70e0b5b4f70bad804ace9812eb2.json"}, "display": {"href": "https://publications.scilifelab.se/publication/8d17e70e0b5b4f70bad804ace9812eb2"}}, "title": "Sorption of pharmaceuticals to foam and aerobic granular sludge with different morphologies", "authors": [{"family": "Burzio", "given": "Cecilia", "initials": "C", "orcid": "0000-0003-3887-2720", "researcher": {"href": "https://publications.scilifelab.se/researcher/6ce542ce47d54ef88fb4306b282aacf8.json"}}, {"family": "Mohammadi", "given": "Amir Saeid", "initials": "AS", "orcid": "0000-0002-4600-773X", "researcher": {"href": "https://publications.scilifelab.se/researcher/6ed821235675423489a4cefa067f4800.json"}}, {"family": "Smith", "given": "Sanne", "initials": "S"}, {"family": "Abadikhah", "given": "Marie", "initials": "M", "orcid": "0000-0002-4270-3340", "researcher": {"href": "https://publications.scilifelab.se/researcher/94d7106a506f42b7bffcce6ffe6b455a.json"}}, {"family": "Svahn", "given": "Ola", "initials": "O"}, {"family": "Modin", "given": "Oskar", "initials": "O", "orcid": "0000-0002-9232-6096", "researcher": {"href": "https://publications.scilifelab.se/researcher/e1cfa2dd97cc472c9307498a65b5a8c6.json"}}, {"family": "Persson", "given": "Frank", "initials": "F", "orcid": "0000-0002-0269-9375", "researcher": {"href": "https://publications.scilifelab.se/researcher/40290cae1a7e44c1939801323653b31c.json"}}, {"family": "Wil\u00e9n", "given": "Britt Marie", "initials": "BM"}], "type": "journal-article", "published": "2024-03-00", "journal": {"title": "Resources, Environment and Sustainability", "issn": "2666-9161", "volume": "15", "pages": "100149", "issn-l": null}, "abstract": null, "doi": "10.1016/j.resenv.2024.100149", "pmid": null, "labels": {"NGI Short read": "Service", "NGI Uppsala (SNP&SEQ Technology Platform)": "Service", "National Genomics Infrastructure": "Service", "Bioinformatics Support for Computational Resources": "Service"}, "xrefs": [], "notes": [], "created": "2024-03-21T09:00:42.585Z", "modified": "2025-12-04T19:40:39.711Z"}, {"entity": "publication", "iuid": "fc535be61b6b43f8869dd1955c2d0546", "links": {"self": {"href": "https://publications.scilifelab.se/publication/fc535be61b6b43f8869dd1955c2d0546.json"}, "display": {"href": "https://publications.scilifelab.se/publication/fc535be61b6b43f8869dd1955c2d0546"}}, "title": "Disturbance-based management of ecosystem services and disservices in partial nitritation-anammox biofilms.", "authors": [{"family": "Suarez", "given": "Carolina", "initials": "C", "orcid": "0000-0001-5988-4048", "researcher": {"href": "https://publications.scilifelab.se/researcher/86cadb16f7cf45eca8030af1a8ae860e.json"}}, {"family": "Sedlacek", "given": "Christopher J", "initials": "CJ"}, {"family": "Gustavsson", "given": "David J I", "initials": "DJI"}, {"family": "Eiler", "given": "Alexander", "initials": "A"}, {"family": "Modin", "given": "Oskar", "initials": "O", "orcid": "0000-0002-9232-6096", "researcher": {"href": "https://publications.scilifelab.se/researcher/e1cfa2dd97cc472c9307498a65b5a8c6.json"}}, {"family": "Hermansson", "given": "Malte", "initials": "M"}, {"family": "Persson", "given": "Frank", "initials": "F", "orcid": "0000-0002-0269-9375", "researcher": {"href": "https://publications.scilifelab.se/researcher/40290cae1a7e44c1939801323653b31c.json"}}], "type": "journal article", "published": "2022-06-08", "journal": {"title": "NPJ Biofilms Microbiomes", "issn": "2055-5008", "issn-l": "2055-5008", "volume": "8", "issue": "1", "pages": "47"}, "abstract": "The resistance and resilience provided by functional redundancy, a common feature of microbial communities, is not always advantageous. An example is nitrite oxidation in partial nitritation-anammox (PNA) reactors designed for nitrogen removal in wastewater treatment, where suppression of nitrite oxidizers like Nitrospira is sought. In these ecosystems, biofilms provide microhabitats with oxygen gradients, allowing the coexistence of aerobic and anaerobic bacteria. We designed a disturbance experiment where PNA biofilms, treating water from a high-rate activated sludge process, were constantly or intermittently exposed to anaerobic sidestream wastewater, which has been proposed to inhibit nitrite oxidizers. With increasing sidestream exposure we observed decreased abundance, alpha-diversity, functional versatility, and hence functional redundancy, among Nitrospira in the PNA biofilms, while the opposite patterns were observed for anammox bacteria within Brocadia. At the same time, species turnover was observed for aerobic ammonia-oxidizing Nitrosomonas populations. The different exposure regimens were associated with metagenomic assembled genomes of Nitrosomonas, Nitrospira, and Brocadia, encoding genes related to N-cycling, substrate usage, and osmotic stress response, possibly explaining the three different patterns by niche differentiation. These findings imply that disturbances can be used to manage the functional redundancy of biofilm microbiomes in a desirable direction, which should be considered when designing operational strategies for wastewater treatment.", "doi": "10.1038/s41522-022-00308-w", "pmid": "35676296", "labels": {"National Genomics Infrastructure": "Service", "NGI Stockholm (Genomics Production)": "Service", "NGI Short read": "Service", "Bioinformatics Support for Computational Resources": "Service"}, "xrefs": [{"db": "pmc", "key": "PMC9178042"}, {"db": "pii", "key": "10.1038/s41522-022-00308-w"}], "notes": [], "created": "2022-08-19T08:38:09.681Z", "modified": "2024-01-16T13:48:36.210Z"}, {"entity": "publication", "iuid": "a014663cca0947d8baf49994504a6cd9", "links": {"self": {"href": "https://publications.scilifelab.se/publication/a014663cca0947d8baf49994504a6cd9.json"}, "display": {"href": "https://publications.scilifelab.se/publication/a014663cca0947d8baf49994504a6cd9"}}, "title": "Thickness determines microbial community structure and function in nitrifying biofilms via deterministic assembly.", "authors": [{"family": "Suarez", "given": "Carolina", "initials": "C", "orcid": "0000-0001-5988-4048", "researcher": {"href": "https://publications.scilifelab.se/researcher/86cadb16f7cf45eca8030af1a8ae860e.json"}}, {"family": "Piculell", "given": "Maria", "initials": "M"}, {"family": "Modin", "given": "Oskar", "initials": "O", "orcid": "0000-0002-9232-6096", "researcher": {"href": "https://publications.scilifelab.se/researcher/e1cfa2dd97cc472c9307498a65b5a8c6.json"}}, {"family": "Langenheder", "given": "Silke", "initials": "S"}, {"family": "Persson", "given": "Frank", "initials": "F"}, {"family": "Hermansson", "given": "Malte", "initials": "M"}], "type": "journal article", "published": "2019-03-25", "journal": {"volume": "9", "issn": "2045-2322", "issue": "1", "pages": "5110", "title": "Sci Rep", "issn-l": "2045-2322"}, "abstract": "Microbial biofilms are ubiquitous in aquatic environments where they provide important ecosystem functions. A key property believed to influence the community structure and function of biofilms is thickness. However, since biofilm thickness is inextricably linked to external factors such as water flow, temperature, development age and nutrient conditions, its importance is difficult to quantify. Here, we designed an experimental system in a wastewater treatment plant whereby nitrifying biofilms with different thicknesses (50 or 400 \u00b5m) were grown in a single reactor, and thus subjected to identical external conditions. The 50 and 400 \u00b5m biofilm communities were significantly different. This beta-diversity between biofilms of different thickness was primarily caused by deterministic factors. Turnover (species replacement) contributed more than nestedness (species loss) to the beta-diversity, i.e. the 50 \u00b5m communities were not simply a subset of the 400 \u00b5m communities. Moreover, the two communities differed in the composition of nitrogen-transforming bacteria and in nitrogen transformation rates. The study illustrates that biofilm thickness alone is a key driver for community composition and ecosystem function, which has implications for biotechnological applications and for our general understanding of biofilm ecology.", "doi": "10.1038/s41598-019-41542-1", "pmid": "30911066", "labels": {"Integrated Microscopy Technologies Gothenburg": "Service"}, "xrefs": [{"db": "pii", "key": "10.1038/s41598-019-41542-1"}, {"db": "pmc", "key": "PMC6434030"}], "notes": [], "created": "2020-01-23T16:13:32.374Z", "modified": "2021-06-16T14:44:51.298Z"}]}