{"entity": "researcher", "timestamp": "2026-07-12T09:38:02.164Z", "family": "Winder", "given": "Monika", "initials": "M", "orcid": "0000-0001-9467-3035", "affiliations": ["Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden."], "links": {"self": {"href": "https://publications.scilifelab.se/researcher/9b09dfb6b68445249b8a93c655433189.json"}, "display": {"href": "https://publications.scilifelab.se/researcher/9b09dfb6b68445249b8a93c655433189"}}, "publications": [{"entity": "publication", "iuid": "f2c25c4dfd474273b0524f9b366d3a5c", "links": {"self": {"href": "https://publications.scilifelab.se/publication/f2c25c4dfd474273b0524f9b366d3a5c.json"}, "display": {"href": "https://publications.scilifelab.se/publication/f2c25c4dfd474273b0524f9b366d3a5c"}}, "title": "Limited resource use overlaps among small pelagic fish species in the central Baltic Sea", "authors": [{"family": "Jan", "given": "Kinlan M G", "initials": "KMG", "orcid": "0000-0002-5579-0017", "researcher": {"href": "https://publications.scilifelab.se/researcher/503d30c9c45541db8a9bd9d37220775b.json"}}, {"family": "Hentati-Sundberg", "given": "Jonas", "initials": "J", "orcid": "0000-0002-3201-9262", "researcher": {"href": "https://publications.scilifelab.se/researcher/584f21d647fc4806b3173e0a83770038.json"}}, {"family": "Larson", "given": "Niklas", "initials": "N", "orcid": "0000-0001-6296-8410", "researcher": {"href": "https://publications.scilifelab.se/researcher/78216d19926a40fe85c65d5615a93a17.json"}}, {"family": "Winder", "given": "Monika", "initials": "M", "orcid": "0000-0001-9467-3035", "researcher": {"href": "https://publications.scilifelab.se/researcher/9b09dfb6b68445249b8a93c655433189.json"}}], "type": "journal-article", "published": "2025-09-02", "journal": {"issn": "1054-3139", "volume": "82", "issue": "9", "issn-l": null}, "abstract": null, "doi": "10.1093/icesjms/fsaf122", "pmid": null, "labels": {"Bioinformatics Support for Computational Resources": "Service"}, "xrefs": [], "notes": [], "created": "2025-11-28T10:49:26.367Z", "modified": "2025-11-28T10:49:26.595Z"}, {"entity": "publication", "iuid": "11b11b15651b41dfbb423bc265d224ba", "links": {"self": {"href": "https://publications.scilifelab.se/publication/11b11b15651b41dfbb423bc265d224ba.json"}, "display": {"href": "https://publications.scilifelab.se/publication/11b11b15651b41dfbb423bc265d224ba"}}, "title": "Dynamics of Gut Bacteria Across Different Zooplankton Genera in the Baltic Sea.", "authors": [{"family": "Xu", "given": "Tianshuo", "initials": "T", "orcid": "0000-0002-6392-728X", "researcher": {"href": "https://publications.scilifelab.se/researcher/87eef0aa1f0444f59d6412df0c7efba4.json"}}, {"family": "Novotny", "given": "Andreas", "initials": "A", "orcid": "0000-0001-8910-6183", "researcher": {"href": "https://publications.scilifelab.se/researcher/2c63db5be95c40e49940affadc958928.json"}}, {"family": "Zamora-Terol", "given": "Sara", "initials": "S", "orcid": "0000-0002-7822-3197", "researcher": {"href": "https://publications.scilifelab.se/researcher/25e1b401fc9a49c5b6f89eaa18f89a57.json"}}, {"family": "Hamb\u00e4ck", "given": "Peter A", "initials": "PA", "orcid": "0000-0001-6362-6199", "researcher": {"href": "https://publications.scilifelab.se/researcher/1ddfc67c7c774583861a5ea3774eaa1a.json"}}, {"family": "Winder", "given": "Monika", "initials": "M", "orcid": "0000-0001-9467-3035", "researcher": {"href": "https://publications.scilifelab.se/researcher/9b09dfb6b68445249b8a93c655433189.json"}}], "type": "journal article", "published": "2024-02-26", "journal": {"title": "Microb. Ecol.", "issn": "1432-184X", "volume": "87", "issue": "1", "pages": "48", "issn-l": "0095-3628"}, "abstract": "In aquatic ecosystems, zooplankton-associated bacteria potentially have a great impact on the structure of ecosystems and trophic networks by providing various metabolic pathways and altering the ecological niche of host species. To understand the composition and drivers of zooplankton gut microbiota, we investigated the associated microbial communities of four zooplankton genera from different seasons in the Baltic Sea using the 16S rRNA gene. Among the 143 ASVs (amplified sequence variants) observed belonging to heterotrophic bacteria, 28 ASVs were shared across all zooplankton hosts over the season, and these shared core ASVs represented more than 25% and up to 60% of relative abundance in zooplankton hosts but were present at low relative abundance in the filtered water. Zooplankton host identity had stronger effects on bacterial composition than seasonal variation, with the composition of gut bacterial communities showing host-specific clustering patterns. Although bacterial compositions and dominating core bacteria were different between zooplankton hosts, higher gut bacteria diversity and more bacteria contributing to the temporal variation were found in Temora and Pseudocalanus, compared to Acartia and Synchaeta. Diet diatom and filamentous cyanobacteria negatively correlated with gut bacteria diversity, but the difference in diet composition did not explain the dissimilarity of gut bacteria composition, suggesting a general effect of diet on the inner conditions in the zooplankton gut. Synchaeta maintained high stability of gut bacterial communities with unexpectedly low bacteria-bacteria interactions as compared to the copepods, indicating host-specific regulation traits. Our results suggest that the patterns of gut bacteria dynamics are host-specific and the variability of gut bacteria is not only related to host taxonomy but also related to host behavior and life history traits.", "doi": "10.1007/s00248-024-02362-7", "pmid": "38409540", "labels": {"NGI Short read": "Service", "NGI Stockholm (Genomics Production)": "Service", "National Genomics Infrastructure": "Service", "Bioinformatics Support for Computational Resources": "Service"}, "xrefs": [{"db": "pmc", "key": "PMC10896951"}, {"db": "pii", "key": "10.1007/s00248-024-02362-7"}], "notes": [], "created": "2024-03-14T11:09:50.360Z", "modified": "2024-11-25T10:10:49.264Z"}, {"entity": "publication", "iuid": "71b77fff8763406e975e694af14df876", "links": {"self": {"href": "https://publications.scilifelab.se/publication/71b77fff8763406e975e694af14df876.json"}, "display": {"href": "https://publications.scilifelab.se/publication/71b77fff8763406e975e694af14df876"}}, "title": "Variation in fatty acid content among benthic invertebrates in a seasonally driven system", "authors": [{"family": "Hedberg", "given": "Per", "initials": "P"}, {"family": "Lau", "given": "Danny C P", "initials": "DCP"}, {"family": "Albert", "given": "S\u00e9r\u00e9na", "initials": "S", "orcid": "0000-0002-7299-7263", "researcher": {"href": "https://publications.scilifelab.se/researcher/32b48bc190fa4bd189e0b9a2f2bad8ef.json"}}, {"family": "Winder", "given": "Monika", "initials": "M", "orcid": "0000-0001-9467-3035", "researcher": {"href": "https://publications.scilifelab.se/researcher/9b09dfb6b68445249b8a93c655433189.json"}}], "type": "journal-article", "published": "2023-05-22", "journal": {"title": "Limnol Oceanogr Letters", "issn": "2378-2242", "issn-l": null}, "abstract": null, "doi": "10.1002/lol2.10333", "pmid": null, "labels": {"Swedish Metabolomics Centre": "Service"}, "xrefs": [], "notes": [], "created": "2023-08-30T07:07:02.330Z", "modified": "2025-10-17T13:03:13.909Z"}, {"entity": "publication", "iuid": "bf7e976078d04040bcd472b4d8d7c795", "links": {"self": {"href": "https://publications.scilifelab.se/publication/bf7e976078d04040bcd472b4d8d7c795.json"}, "display": {"href": "https://publications.scilifelab.se/publication/bf7e976078d04040bcd472b4d8d7c795"}}, "title": "Quality of phytoplankton deposition structures bacterial communities at the water-sediment interface.", "authors": [{"family": "Izabel-Shen", "given": "Dandan", "initials": "D", "orcid": "0000-0002-3280-1166", "researcher": {"href": "https://publications.scilifelab.se/researcher/21fcbf89ed644524852f2e12217f5371.json"}}, {"family": "Albert", "given": "S\u00e9r\u00e9na", "initials": "S", "orcid": "0000-0002-7299-7263", "researcher": {"href": "https://publications.scilifelab.se/researcher/32b48bc190fa4bd189e0b9a2f2bad8ef.json"}}, {"family": "Winder", "given": "Monika", "initials": "M", "orcid": "0000-0001-9467-3035", "researcher": {"href": "https://publications.scilifelab.se/researcher/9b09dfb6b68445249b8a93c655433189.json"}}, {"family": "Farnelid", "given": "Hanna", "initials": "H", "orcid": "0000-0003-3083-7437", "researcher": {"href": "https://publications.scilifelab.se/researcher/d180092da06e4c5aa50d93ae941f1c83.json"}}, {"family": "Nascimento", "given": "Francisco J A", "initials": "FJA", "orcid": "0000-0003-3722-1360", "researcher": {"href": "https://publications.scilifelab.se/researcher/5c2cfb0d7a614432b9dfdfcfa3fc4644.json"}}], "type": "journal article", "published": "2021-07-00", "journal": {"title": "Mol. Ecol.", "issn": "1365-294X", "volume": "30", "issue": "14", "pages": "3515-3529", "issn-l": "0962-1083"}, "abstract": "Phytoplankton comprises a large fraction of the vertical carbon flux to deep water via the sinking of particulate organic matter (POM). However, despite the importance of phytoplankton in the coupling of benthic-pelagic productivity, the extent to which its deposition in the sediment affects bacterial dynamics at the water-sediment interface is poorly understood. Here, we conducted a microcosm experiment in which varying mixtures of diatom and cyanobacteria, representing phytoplankton-derived POM of differing quality, served as inputs to sediment cores. Characterization of 16S rRNA gene of the bacterial communities at the water-sediment interface showed that bacterial \u03b1-diversity was not affected by POM addition, while bacterial \u03b2-diversity changed significantly along the POM quality gradient, with the variation driven by changes in relative abundance rather than in taxon replacement. Analysing individual taxa abundances across the POM gradient revealed two distinct bacterial responses, in which taxa within either diatom- or cyanobacteria-favoured groups were more phylogenetically closely related to one another than other taxa found in the water. Moreover, there was little overlap in taxon identity between sediment and water communities, suggesting the minor role played by sediment bacteria in influencing the observed changes in bacterial communities in the overlying water. Together, these results showed that variability in phytoplankton-originated POM can impact bacterial dynamics at the water-sediment interface. Our findings highlight the importance of considering the potential interactions between phytoplankton and bacteria in benthic-pelagic coupling in efforts to understand the structure and function of bacterial communities under a changing climate.", "doi": "10.1111/mec.15984", "pmid": "33993575", "labels": {"National Genomics Infrastructure": "Service", "NGI Stockholm (Genomics Production)": "Service", "NGI Stockholm (Genomics Applications)": "Service", "Bioinformatics Support for Computational Resources": "Service"}, "xrefs": [], "notes": [], "created": "2021-10-01T09:01:06.266Z", "modified": "2024-01-16T13:48:39.232Z"}]}