Translational Plasma Profiling

SciLifeLab Infrastructure Unit Since 2013.

Started: 2013

Ended: Current

86 publications

Year 2021

Year 2020

Longitudinal plasma protein profiling of newly diagnosed type 2 diabetes.
Gummesson A, Björnson E, Fagerberg L, ..., Uhlén M, Bergström G
pii: S2352-3964(20)30523-5
EBioMedicine 63 (-) 103147 [2020-12-03; online 2020-12-03]
Bioinformatics Compute and Storage [Service] Translational Plasma Profiling [Collaborative]
Whole blood co-expression modules associate with metabolic traits and type 2 diabetes: an IMI-DIRECT study.
Gudmundsdottir V, Pedersen HK, Mazzoni G, ..., Pedersen O, Brunak S
pii: 10.1186/s13073-020-00806-6 pmc: PMC7708171
Genome Med 12 (1) 109 [2020-12-01; online 2020-12-01]
Translational Plasma Profiling [Collaborative]
A high-stringency blueprint of the human proteome.
Adhikari S, Nice EC, Deutsch EW, ..., Aebersold R, Baker MS
pii: 10.1038/s41467-020-19045-9 pmc: PMC7568584
Nat Commun 11 (1) 5301 [2020-10-16; online 2020-10-16]
Translational Plasma Profiling [Collaborative]
MAIT cell activation and dynamics associated with COVID-19 disease severity.
Parrot T, Gorin JB, Ponzetta A, ..., Strålin K, Sandberg JK
pii: 5/51/eabe1670
Sci Immunol 5 (51) - [2020-09-28; online 2020-09-30]
Translational Plasma Profiling [Service]
Natural killer cell immunotypes related to COVID-19 disease severity.
Maucourant C, Filipovic I, Ponzetta A, ..., Björkström NK, Karolinska COVID-19 Study Group
pii: 5/50/eabd6832 pmc: PMC7665314
Sci Immunol 5 (50) eabd6832 [2020-08-21; online 2020-08-23]
Bioinformatics Compute and Storage [Service] Translational Plasma Profiling [Service]
Facets of individual-specific health signatures determined from longitudinal plasma proteome profiling.
Dodig-Crnković T, Hong M, Thomas CE, ..., Uhlén M, Schwenk JM
pii: S2352-3964(20)30229-2 pmc: PMC7334812
EBioMedicine 57 (-) 102854 [2020-07-00; online 2020-07-03]
Translational Plasma Profiling [Collaborative]

Year 2019

Multiplexed analysis of the secretin-like GPCR-RAMP interactome.
Lorenzen E, Dodig-Crnković T, Kotliar IB, ..., Schwenk JM, Sakmar TP
pii: aaw2778 pmc: PMC6750928
Sci Adv 5 (9) eaaw2778 [2019-09-00; online 2019-09-18]
Translational Plasma Profiling [Collaborative]
Systematic Development of Sandwich Immunoassays for the Plasma Secretome.
Häussler RS, Bendes A, Iglesias M, ..., Qundos U, Schwenk JM
Proteomics 19 (15) e1900008 [2019-08-00; online 2019-07-22]
Translational Plasma Profiling [Technology development]
Plasma protein profiling reveals candidate biomarkers for multiple sclerosis treatment.
Bedri SK, Nilsson OB, Fink K, ..., Grönlund H, Glaser A
pii: PONE-D-18-30095 pmc: PMC6541274
PLoS ONE 14 (5) e0217208 [2019-05-29; online 2019-05-29]
Translational Plasma Profiling [Collaborative]

Year 2018

Current applications of antibody microarrays.
Chen Z, Dodig-Crnković T, Schwenk JM, Tao SC
pii: 9184 pmc: PMC5830343
Clin Proteomics 15 (-) 7 [2018-02-28; online 2018-02-28]
Translational Plasma Profiling [Collaborative]

Year 2017

Discovery of circulating proteins associated to knee radiographic osteoarthritis.
Lourido L, Ayoglu B, Fernández-Tajes J, ..., Nilsson P, Blanco FJ
pii: 10.1038/s41598-017-00195-8 pmc: PMC5427840
Sci Rep 7 (1) 137 [2017-03-09; online 2017-03-09]
Translational Plasma Profiling [Collaborative]

Year 2016

PDGFB, a new candidate plasma biomarker for venous thromboembolism: results from the VEREMA affinity proteomics study.
Bruzelius M, Iglesias MJ, Hong MG, ..., Trégouët DA, Odeberg J
pii: blood-2016-05-711846
Blood 128 (23) e59-e66 [2016-12-08; online 2016-10-16]
Translational Plasma Profiling [Collaborative]
Protein profiling in serum after traumatic brain injury in rats reveals potential injury markers.
Thelin EP, Just D, Frostell A, ..., Nilsson P, Bellander BM
pii: S0166-4328(16)30576-9
Behav. Brain Res. - (-) - [2016-08-31; online 2016-08-31]
Translational Plasma Profiling [Collaborative]
Elevated levels of FN1 and CCL2 in bronchoalveolar lavage fluid from sarcoidosis patients.
Hamsten C, Wiklundh E, Grönlund H, ..., Grunewald J, Häggmark-Månberg A
pii: 10.1186/s12931-016-0381-0 pmc: PMC4893268
Respir. Res. 17 (1) 69 [2016-06-04; online 2016-06-04]
Translational Plasma Profiling [Collaborative]
Multiplexed protein profiling by sequential affinity capture.
Ayoglu B, Birgersson E, Mezger A, ..., Nilsson P, Schwenk JM
Proteomics 16 (8) 1251-1256 [2016-04-00; online 2016-03-05]
Translational Plasma Profiling [Technology development]
Analysis of the Cerebrospinal Fluid Proteome in Alzheimer's Disease.
Khoonsari PE, Häggmark A, Lönnberg M, ..., Kultima K, Shevchenko G
pii: PONE-D-15-44118 pmc: PMC4780771
PLoS ONE 11 (3) e0150672 [2016-03-07; online 2016-03-07]
Translational Plasma Profiling [Collaborative]

Year 2015

Heat differentiated complement factor profiling.
Hamsten C, Skattum L, Truedsson L, ..., Nilsson P, Neiman M
pii: S1874-3919(15)30029-4
J Proteomics 126 (-) 155-162 [2015-08-03; online 2015-06-07]
Translational Plasma Profiling [Technology development]
Circulating carnosine dipeptidase 1 associates with weight loss and poor prognosis in gastrointestinal cancer.
Arner P, Henjes F, Schwenk JM, ..., Nilsson P, Rydén M
pii: PONE-D-14-54419 pmc: PMC4405487
PLoS ONE 10 (4) e0123566 [2015-04-21; online 2015-04-21]
Translational Plasma Profiling

Year 2014

Affinity proteomics within rare diseases: a BIO-NMD study for blood biomarkers of muscular dystrophies.
Ayoglu B, Chaouch A, Lochmüller H, ..., Nilsson P, Al-Khalili Szigyarto C
pii: emmm.201303724 pmc: PMC4119355
EMBO Mol Med 6 (7) 918-936 [2014-07-00; online 2014-06-13]
Translational Plasma Profiling [Collaborative]
Affinity proteomics reveals elevated muscle proteins in plasma of children with cerebral malaria.
Bachmann J, Burté F, Pramana S, ..., Fernandez-Reyes D, Nilsson P
pii: PPATHOGENS-D-13-01973 pmc: PMC3990714
PLoS Pathog. 10 (4) e1004038 [2014-04-00; online 2014-04-17]
Translational Plasma Profiling [Collaborative]

Year 2013

Profiling post-centrifugation delay of serum and plasma with antibody bead arrays.
Qundos U, Hong M, Tybring G, ..., Nilsson P, Schwenk JM
pii: S1874-3919(13)00209-1
J Proteomics 95 (-) 46-54 [2013-12-16; online 2013-05-02]
Translational Plasma Profiling [Collaborative]
Antibody-based profiling of cerebrospinal fluid within multiple sclerosis.
Häggmark A, Byström S, Ayoglu B, ..., Schwenk JM, Nilsson P
Proteomics 13 (15) 2256-2267 [2013-08-00; online 2013-05-23]
Translational Plasma Profiling [Collaborative]

Year 2012

Classification of protein profiles from antibody microarrays using heat and detergent treatment.
Häggmark A, Neiman M, Drobin K, ..., Nilsson P, Schwenk JM
pii: S1871-6784(11)00225-1
N Biotechnol 29 (5) 564-570 [2012-06-15; online 2011-10-26]
Translational Plasma Profiling [Technology development]

Year 2011

Plasma profiling reveals human fibulin-1 as candidate marker for renal impairment.
Neiman M, Hedberg JJ, Dönnes PR, ..., Schwenk JM, Nilsson P
J. Proteome Res. 10 (11) 4925-4934 [2011-11-04; online 2011-09-29]
Translational Plasma Profiling [Collaborative]

Year 2010